RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 IGKV4-1P06312 121 aa6.26□□□□□ -1.41
TMEM260-211ENST00000556648 UBE2AP49459 152 aa6.26□□□□□ -1.41
TMEM260-211ENST00000556648 IGFL1Q6UW32 110 aa6.26□□□□□ -1.41
TMEM260-211ENST00000556648 LINC00474Q9P2X8 69 aa6.26□□□□□ -1.41
TMEM260-211ENST00000556648 HECTD4Q9Y4D8 3996 aa6.25□□□□□ -1.41
TMEM260-211ENST00000556648 PKIGQ9Y2B9 76 aa6.25□□□□□ -1.41
TMEM260-211ENST00000556648 F8WEM9 126 aa6.25□□□□□ -1.41
TMEM260-211ENST00000556648 SPRR4Q96PI1 79 aa6.25□□□□□ -1.41
TMEM260-211ENST00000556648 BCE1O60756 84 aa6.24□□□□□ -1.41
TMEM260-211ENST00000556648 LY6G6CO95867 125 aa6.24□□□□□ -1.41
TMEM260-211ENST00000556648 CRYGAP11844 174 aa6.24□□□□□ -1.41
TMEM260-211ENST00000556648 KRTAP13-1Q8IUC0 172 aa6.24□□□□□ -1.41
TMEM260-211ENST00000556648 H0Y9J4 135 aa6.23□□□□□ -1.41
TMEM260-211ENST00000556648 IGLV8-61A0A075B6I0 122 aa6.21□□□□□ -1.41
TMEM260-211ENST00000556648 C1orf134Q5TEV5 83 aa6.21□□□□□ -1.41
TMEM260-211ENST00000556648 FBN3Q75N90 2809 aa6.21□□□□□ -1.42
TMEM260-211ENST00000556648 SPRR1BP22528 89 aa6.21□□□□□ -1.42
TMEM260-211ENST00000556648 DNAH2Q9P225 4427 aa6.2□□□□□ -1.42
TMEM260-211ENST00000556648 DNAH17Q9UFH2 4485 aa6.2□□□□□ -1.42
TMEM260-211ENST00000556648 IGLV5-52A0A0A0MRZ9 124 aa6.2□□□□□ -1.42
TMEM260-211ENST00000556648 TRAV7A0A075B6U4 112 aa6.19□□□□□ -1.42
TMEM260-211ENST00000556648 A0A1B0GW54 56 aa6.19□□□□□ -1.42
TMEM260-211ENST00000556648 DSCR10P59022 87 aa6.19□□□□□ -1.42
TMEM260-211ENST00000556648 SRRM2Q9UQ35 2752 aaKnown RBP6.19□□□□□ -1.42
TMEM260-211ENST00000556648 A0A087WSZ3 146 aa6.18□□□□□ -1.42
TMEM260-211ENST00000556648 DEFB116Q30KQ4 102 aa6.18□□□□□ -1.42
TMEM260-211ENST00000556648 LCE2BO14633 110 aa6.18□□□□□ -1.42
TMEM260-211ENST00000556648 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
TMEM260-211ENST00000556648 PSORS1C2Q9UIG4 136 aa6.18□□□□□ -1.42
TMEM260-211ENST00000556648 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
TMEM260-211ENST00000556648 K7EQZ3 153 aa6.17□□□□□ -1.42
TMEM260-211ENST00000556648 PLAC8Q9NZF1 115 aa6.17□□□□□ -1.42
TMEM260-211ENST00000556648 KRTAP10-2P60368 255 aa6.15□□□□□ -1.42
TMEM260-211ENST00000556648 ALMS1Q8TCU4 4167 aa6.14□□□□□ -1.43
TMEM260-211ENST00000556648 FRAS1Q86XX4 4008 aa6.14□□□□□ -1.43
TMEM260-211ENST00000556648 IGLV9-49A0A0B4J1Y8 123 aa6.14□□□□□ -1.43
TMEM260-211ENST00000556648 WWC2-AS2Q96NR7 200 aa6.14□□□□□ -1.43
TMEM260-211ENST00000556648 SNURFQ9Y675 71 aa6.14□□□□□ -1.43
TMEM260-211ENST00000556648 RPL37AP61513 92 aaKnown RBP6.13□□□□□ -1.43
TMEM260-211ENST00000556648 SMIM20Q8N5G0 67 aa6.13□□□□□ -1.43
TMEM260-211ENST00000556648 ANAPC11Q9NYG5 84 aa6.13□□□□□ -1.43
TMEM260-211ENST00000556648 FAM30AQ9NZY2 134 aa6.13□□□□□ -1.43
TMEM260-211ENST00000556648 TGP01266 2768 aa6.13□□□□□ -1.43
TMEM260-211ENST00000556648 OCR1Q9BZK8 76 aa6.12□□□□□ -1.43
TMEM260-211ENST00000556648 LINC00483Q53H64 154 aa6.11□□□□□ -1.43
TMEM260-211ENST00000556648 HYDINQ4G0P3 5121 aa6.11□□□□□ -1.43
TMEM260-211ENST00000556648 DNAH8Q96JB1 4490 aa6.11□□□□□ -1.43
TMEM260-211ENST00000556648 KRTAP21-3Q3LHN1 58 aa6.11□□□□□ -1.43
TMEM260-211ENST00000556648 TMEM258P61165 79 aa6.1□□□□□ -1.43
TMEM260-211ENST00000556648 ZNF861PO60384 105 aa6.09□□□□□ -1.43
TMEM260-211ENST00000556648 HRCT1Q6UXD1 115 aa6.09□□□□□ -1.43
TMEM260-211ENST00000556648 H7BZZ5 65 aa6.08□□□□□ -1.44
TMEM260-211ENST00000556648 KLKP1Q107X0 134 aa6.08□□□□□ -1.44
TMEM260-211ENST00000556648 MOBPQ13875 183 aa6.08□□□□□ -1.44
TMEM260-211ENST00000556648 DNAH11Q96DT5 4516 aa6.08□□□□□ -1.44
TMEM260-211ENST00000556648 HCG22E2RYF7 251 aa6.08□□□□□ -1.44
TMEM260-211ENST00000556648 CIRBP-AS1Q8TBR5 109 aa6.08□□□□□ -1.44
TMEM260-211ENST00000556648 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
TMEM260-211ENST00000556648 DNAH5Q8TE73 4624 aa6.07□□□□□ -1.44
TMEM260-211ENST00000556648 IGLV7-43P04211 117 aa6.07□□□□□ -1.44
TMEM260-211ENST00000556648 KRTAP10-1P60331 282 aa6.07□□□□□ -1.44
TMEM260-211ENST00000556648 WFDC13Q8IUB5 93 aa6.07□□□□□ -1.44
TMEM260-211ENST00000556648 TMEM254Q8TBM7 123 aa6.07□□□□□ -1.44
TMEM260-211ENST00000556648 ZNF706Q9Y5V0 76 aaPredicted RBP6.07□□□□□ -1.44
TMEM260-211ENST00000556648 A0A0U1RQV1 116 aa6.05□□□□□ -1.44
TMEM260-211ENST00000556648 OXTP01178 125 aa6.04□□□□□ -1.44
TMEM260-211ENST00000556648 Q96NJ1 140 aa6.04□□□□□ -1.44
TMEM260-211ENST00000556648 FAM236DA0A1B0GTK5 79 aa6.03□□□□□ -1.44
TMEM260-211ENST00000556648 FAM236CP0DP71 79 aa6.03□□□□□ -1.44
TMEM260-211ENST00000556648 PKD1P98161 4303 aa6.03□□□□□ -1.44
TMEM260-211ENST00000556648 A8MWP4 228 aa6.03□□□□□ -1.44
TMEM260-211ENST00000556648 PRR15Q8IV56 129 aa6.03□□□□□ -1.44
TMEM260-211ENST00000556648 KRTAP29-1A8MX34 341 aaPredicted RBP6.02□□□□□ -1.45
TMEM260-211ENST00000556648 Q6ZSA8 131 aa6.02□□□□□ -1.45
TMEM260-211ENST00000556648 LCE6AA0A183 80 aa6.01□□□□□ -1.45
TMEM260-211ENST00000556648 J3KT08 172 aa6.01□□□□□ -1.45
TMEM260-211ENST00000556648 FAT2Q9NYQ8 4349 aa6.01□□□□□ -1.45
TMEM260-211ENST00000556648 CASC2Q6XLA1 102 aa5.99□□□□□ -1.45
TMEM260-211ENST00000556648 MMP24-AS1A0A0U1RRL7 71 aa5.99□□□□□ -1.45
TMEM260-211ENST00000556648 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
TMEM260-211ENST00000556648 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
TMEM260-211ENST00000556648 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
TMEM260-211ENST00000556648 NDUFC1O43677 76 aa5.97□□□□□ -1.45
TMEM260-211ENST00000556648 ZCCHC13Q8WW36 166 aaKnown RBP5.96□□□□□ -1.45
TMEM260-211ENST00000556648 A0A087X002 238 aa5.95□□□□□ -1.46
TMEM260-211ENST00000556648 KRTAP13-2Q52LG2 175 aa5.94□□□□□ -1.46
TMEM260-211ENST00000556648 IGHV6-1A0A0B4J1U7 121 aa5.93□□□□□ -1.46
TMEM260-211ENST00000556648 C5orf47Q569G3 176 aa5.93□□□□□ -1.46
TMEM260-211ENST00000556648 A0A1B0GVX0 72 aa5.92□□□□□ -1.46
TMEM260-211ENST00000556648 NDUFB1O75438 58 aa5.92□□□□□ -1.46
TMEM260-211ENST00000556648 NOTCH2NLQ7Z3S9 236 aa5.92□□□□□ -1.46
TMEM260-211ENST00000556648 C8orf17Q9NRJ1 99 aa5.92□□□□□ -1.46
TMEM260-211ENST00000556648 hDV103S1A0JD37 113 aa5.92□□□□□ -1.46
TMEM260-211ENST00000556648 SPINK6Q6UWN8 80 aa5.92□□□□□ -1.46
TMEM260-211ENST00000556648 SERP1Q9Y6X1 66 aa5.92□□□□□ -1.46
TMEM260-211ENST00000556648 LRP1BQ9NZR2 4599 aa5.92□□□□□ -1.46
TMEM260-211ENST00000556648 H0Y9P7 68 aa5.91□□□□□ -1.46
TMEM260-211ENST00000556648 ASB16-AS1Q495Z4 193 aa5.91□□□□□ -1.46
TMEM260-211ENST00000556648 KRTAP1-4P0C5Y4 121 aa5.9□□□□□ -1.47
TMEM260-211ENST00000556648 SACSQ9NZJ4 4579 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 218.4 ms