RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 HIST1H2BLQ99880 126 aa5.73□□□□□ -1.49
SPTLC2-205ENST00000556607 LINC00575Q6W349 94 aa5.72□□□□□ -1.49
SPTLC2-205ENST00000556607 C12orf57Q99622 126 aa5.72□□□□□ -1.49
SPTLC2-205ENST00000556607 KRTAP9-6A0A140TA67 174 aa5.71□□□□□ -1.5
SPTLC2-205ENST00000556607 SCGB1D1O95968 90 aa5.71□□□□□ -1.5
SPTLC2-205ENST00000556607 HIST1H4GQ99525 98 aa5.71□□□□□ -1.5
SPTLC2-205ENST00000556607 BVES-AS1Q5T3Y7 98 aa5.68□□□□□ -1.5
SPTLC2-205ENST00000556607 Q6JHZ5 121 aa5.68□□□□□ -1.5
SPTLC2-205ENST00000556607 SNHG12Q9BXW3 62 aa5.68□□□□□ -1.5
SPTLC2-205ENST00000556607 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
SPTLC2-205ENST00000556607 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
SPTLC2-205ENST00000556607 IGFL1Q6UW32 110 aa5.67□□□□□ -1.5
SPTLC2-205ENST00000556607 CLEC2BQ92478 149 aa5.67□□□□□ -1.5
SPTLC2-205ENST00000556607 TRBV7-7A0A0K0K1E9 115 aa5.66□□□□□ -1.5
SPTLC2-205ENST00000556607 S100A1P23297 94 aa5.66□□□□□ -1.5
SPTLC2-205ENST00000556607 OCIAD2Q56VL3 154 aa5.66□□□□□ -1.5
SPTLC2-205ENST00000556607 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.66□□□□□ -1.5
SPTLC2-205ENST00000556607 COX6B2Q6YFQ2 88 aa5.66□□□□□ -1.5
SPTLC2-205ENST00000556607 SNCGO76070 127 aa5.65□□□□□ -1.5
SPTLC2-205ENST00000556607 MT1HP80294 61 aa5.65□□□□□ -1.5
SPTLC2-205ENST00000556607 RAB37Q96AX2 223 aa5.65□□□□□ -1.5
SPTLC2-205ENST00000556607 M0R2T5 61 aa5.64□□□□□ -1.51
SPTLC2-205ENST00000556607 COX8AP10176 69 aa5.64□□□□□ -1.51
SPTLC2-205ENST00000556607 H3BUT2 72 aa5.63□□□□□ -1.51
SPTLC2-205ENST00000556607 CFC1BP0CG36 223 aa5.63□□□□□ -1.51
SPTLC2-205ENST00000556607 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
SPTLC2-205ENST00000556607 PPDPFLQ8WWR9 84 aa5.63□□□□□ -1.51
SPTLC2-205ENST00000556607 C14orf144Q96I85 54 aa5.63□□□□□ -1.51
SPTLC2-205ENST00000556607 LST1O00453 97 aa5.62□□□□□ -1.51
SPTLC2-205ENST00000556607 CFC1P0CG37 223 aa5.61□□□□□ -1.51
SPTLC2-205ENST00000556607 ATP11AUNQ6ZP68 121 aa5.61□□□□□ -1.51
SPTLC2-205ENST00000556607 OBSCN-AS1Q96MR7 158 aa5.61□□□□□ -1.51
SPTLC2-205ENST00000556607 PAM16Q9Y3D7 125 aa5.61□□□□□ -1.51
SPTLC2-205ENST00000556607 Q6Q795 121 aa5.6□□□□□ -1.51
SPTLC2-205ENST00000556607 H0YGX0 51 aa5.59□□□□□ -1.51
SPTLC2-205ENST00000556607 DLEU1O43261 78 aa5.59□□□□□ -1.51
SPTLC2-205ENST00000556607 SPATA45Q537H7 98 aa5.59□□□□□ -1.51
SPTLC2-205ENST00000556607 Q96NJ1 140 aa5.58□□□□□ -1.52
SPTLC2-205ENST00000556607 VAMP8Q9BV40 100 aa5.58□□□□□ -1.52
SPTLC2-205ENST00000556607 SS18L2Q9UHA2 77 aa5.58□□□□□ -1.52
SPTLC2-205ENST00000556607 FSIP2Q5CZC0 6907 aa5.57□□□□□ -1.52
SPTLC2-205ENST00000556607 A0A0B4J2C4 111 aa5.57□□□□□ -1.52
SPTLC2-205ENST00000556607 FABP2P12104 132 aa5.57□□□□□ -1.52
SPTLC2-205ENST00000556607 NDUFV3P56181 108 aaKnown RBP5.57□□□□□ -1.52
SPTLC2-205ENST00000556607 TMEM238LA0A1B0GVL6 79 aa5.56□□□□□ -1.52
SPTLC2-205ENST00000556607 GHRHP01286 108 aa5.56□□□□□ -1.52
SPTLC2-205ENST00000556607 TEN1Q86WV5 123 aa5.56□□□□□ -1.52
SPTLC2-205ENST00000556607 FAM218AQ96MZ4 157 aa5.56□□□□□ -1.52
SPTLC2-205ENST00000556607 HIGD1BQ9P298 99 aa5.56□□□□□ -1.52
SPTLC2-205ENST00000556607 A0A087WSZ3 146 aa5.55□□□□□ -1.52
SPTLC2-205ENST00000556607 H3BMG7 143 aa5.55□□□□□ -1.52
SPTLC2-205ENST00000556607 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
SPTLC2-205ENST00000556607 Q75L30 129 aa5.55□□□□□ -1.52
SPTLC2-205ENST00000556607 CEND1Q8N111 149 aa5.55□□□□□ -1.52
SPTLC2-205ENST00000556607 CRCT1Q9UGL9 99 aa5.55□□□□□ -1.52
SPTLC2-205ENST00000556607 PRO1854Q9UHT4 67 aa5.54□□□□□ -1.52
SPTLC2-205ENST00000556607 LORP23490 312 aaPredicted RBP5.53□□□□□ -1.52
SPTLC2-205ENST00000556607 C2orf91Q6ZV80 131 aa5.53□□□□□ -1.52
SPTLC2-205ENST00000556607 A0A1B0GV72 72 aa5.51□□□□□ -1.53
SPTLC2-205ENST00000556607 A0A1B0GX51 115 aa5.51□□□□□ -1.53
SPTLC2-205ENST00000556607 DNAL4O96015 105 aa5.51□□□□□ -1.53
SPTLC2-205ENST00000556607 PSMB2P49721 201 aa5.51□□□□□ -1.53
SPTLC2-205ENST00000556607 TRIAP1O43715 76 aa5.5□□□□□ -1.53
SPTLC2-205ENST00000556607 FXYD2P54710 66 aa5.5□□□□□ -1.53
SPTLC2-205ENST00000556607 SIGMAR1Q99720 223 aa5.5□□□□□ -1.53
SPTLC2-205ENST00000556607 TRBV20-1A0A075B6N2 111 aa5.49□□□□□ -1.53
SPTLC2-205ENST00000556607 DSCR10P59022 87 aa5.49□□□□□ -1.53
SPTLC2-205ENST00000556607 ANKRD29Q8N6D5 301 aa5.48□□□□□ -1.53
SPTLC2-205ENST00000556607 ORMDL1Q9P0S3 153 aa5.48□□□□□ -1.53
SPTLC2-205ENST00000556607 A0A1W2PNM2 257 aa5.47□□□□□ -1.53
SPTLC2-205ENST00000556607 COX6CP09669 75 aa5.47□□□□□ -1.53
SPTLC2-205ENST00000556607 C20orf166-AS1Q96NR2 134 aa5.47□□□□□ -1.53
SPTLC2-205ENST00000556607 A8MUU9 505 aa5.46□□□□□ -1.54
SPTLC2-205ENST00000556607 IGKV4-1P06312 121 aa5.46□□□□□ -1.54
SPTLC2-205ENST00000556607 H3BQ85 93 aa5.45□□□□□ -1.54
SPTLC2-205ENST00000556607 K7ERJ3 54 aa5.45□□□□□ -1.54
SPTLC2-205ENST00000556607 LINC00313P59037 77 aa5.45□□□□□ -1.54
SPTLC2-205ENST00000556607 HSD52Q0P140 79 aa5.45□□□□□ -1.54
SPTLC2-205ENST00000556607 TMEM256-PLSCR3K7ERE1 68 aa5.44□□□□□ -1.54
SPTLC2-205ENST00000556607 DEFB116Q30KQ4 102 aa5.44□□□□□ -1.54
SPTLC2-205ENST00000556607 TRBV7-4A0A0J9YYF1 115 aa5.43□□□□□ -1.54
SPTLC2-205ENST00000556607 TRACP01848 142 aa5.43□□□□□ -1.54
SPTLC2-205ENST00000556607 CCKP06307 115 aa5.43□□□□□ -1.54
SPTLC2-205ENST00000556607 VPS25Q9BRG1 176 aa5.43□□□□□ -1.54
SPTLC2-205ENST00000556607 FAM236DA0A1B0GTK5 79 aa5.42□□□□□ -1.54
SPTLC2-205ENST00000556607 FAM236CP0DP71 79 aa5.42□□□□□ -1.54
SPTLC2-205ENST00000556607 SCGB1C2P0DMR2 95 aa5.41□□□□□ -1.54
SPTLC2-205ENST00000556607 PYY3Q5JQD4 70 aa5.41□□□□□ -1.54
SPTLC2-205ENST00000556607 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
SPTLC2-205ENST00000556607 IGHV6-1A0A0B4J1U7 121 aa5.4□□□□□ -1.54
SPTLC2-205ENST00000556607 TMA7Q9Y2S6 64 aaKnown RBP5.39□□□□□ -1.55
SPTLC2-205ENST00000556607 UBE2V1Q13404 147 aa5.38□□□□□ -1.55
SPTLC2-205ENST00000556607 NOTCH2NLQ7Z3S9 236 aa5.38□□□□□ -1.55
SPTLC2-205ENST00000556607 UQCR10Q9UDW1 63 aa5.38□□□□□ -1.55
SPTLC2-205ENST00000556607 RBM3P98179 157 aaKnown RBP5.37□□□□□ -1.55
SPTLC2-205ENST00000556607 DSCR8Q96T75 97 aa5.37□□□□□ -1.55
SPTLC2-205ENST00000556607 RBM12B-AS1Q9P1G2 102 aa5.37□□□□□ -1.55
SPTLC2-205ENST00000556607 KRTAP16-1A8MUX0 517 aa5.36□□□□□ -1.55
SPTLC2-205ENST00000556607 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
SPTLC2-205ENST00000556607 A0A1B0GVX0 72 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms