RNA–Protein interactions for RNA: ENST00000556591.1

CFAP54-208, Transcript of cilia and flagella associated protein 54, human

TSL 5

Gene CFAP54, Length 802 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CFAP54-208	ENST00000556591	C20orf78	Q9BR46	151 aa		-0.92	□□□□□ -2.56
CFAP54-208	ENST00000556591	TCEAL7	Q9BRU2	100 aa		-0.92	□□□□□ -2.56
CFAP54-208	ENST00000556591	TNRC6C	Q9HCJ0	1690 aa	Known RBP	-0.92	□□□□□ -2.56
CFAP54-208	ENST00000556591	ACACA	Q13085	2346 aa		-0.92	□□□□□ -2.56
CFAP54-208	ENST00000556591	CCDC168	Q8NDH2	2452 aa		-0.92	□□□□□ -2.56
CFAP54-208	ENST00000556591	PLXNC1	O60486	1568 aa		-0.92	□□□□□ -2.56
CFAP54-208	ENST00000556591	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	-0.92	□□□□□ -2.56
CFAP54-208	ENST00000556591	UBR1	Q8IWV7	1749 aa		-0.92	□□□□□ -2.56
CFAP54-208	ENST00000556591	CMYA5	Q8N3K9	4069 aa		-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591	SCN11A	Q9UI33	1791 aa		-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591	CEP290	O15078	2479 aa		-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591	PKD1L2	Q7Z442	2459 aa		-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591	TRAV21	A0A0B4J279	112 aa		-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591		H0YAA0	97 aa		-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591	C3orf79	P0CE67	100 aa		-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591	KRTAP19-5	Q3LI72	72 aa		-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591	ACACB	O00763	2458 aa		-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591	PLEC	Q15149	4684 aa	Known RBP	-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591	ABCC10	Q5T3U5	1492 aa		-0.93	□□□□□ -2.56
CFAP54-208	ENST00000556591	POLR1A	O95602	1720 aa	Predicted RBP	-0.94	□□□□□ -2.56
CFAP54-208	ENST00000556591	TIAM2	Q8IVF5	1701 aa		-0.94	□□□□□ -2.56
CFAP54-208	ENST00000556591	IQCF6	A8MYZ5	107 aa		-0.94	□□□□□ -2.56
CFAP54-208	ENST00000556591	LINC00158	P58513	81 aa		-0.94	□□□□□ -2.56
CFAP54-208	ENST00000556591	PRLH	P81277	87 aa		-0.94	□□□□□ -2.56
CFAP54-208	ENST00000556591	PLGLA	Q15195	96 aa		-0.94	□□□□□ -2.56
CFAP54-208	ENST00000556591	PRO3102	Q9H379	93 aa		-0.94	□□□□□ -2.56
CFAP54-208	ENST00000556591	SUPT6H	Q7KZ85	1726 aa	Known RBP	-0.95	□□□□□ -2.56
CFAP54-208	ENST00000556591	CHD7	Q9P2D1	2997 aa		-0.95	□□□□□ -2.56
CFAP54-208	ENST00000556591	LCE6A	A0A183	80 aa		-0.95	□□□□□ -2.56
CFAP54-208	ENST00000556591		M0R143	59 aa		-0.95	□□□□□ -2.56
CFAP54-208	ENST00000556591	RPL38	P63173	70 aa	Known RBP	-0.95	□□□□□ -2.56
CFAP54-208	ENST00000556591	SNHG12	Q9BXW3	62 aa		-0.95	□□□□□ -2.56
CFAP54-208	ENST00000556591	ZNF831	Q5JPB2	1677 aa		-0.95	□□□□□ -2.56
CFAP54-208	ENST00000556591	DOT1L	Q8TEK3	1739 aa		-0.95	□□□□□ -2.56
CFAP54-208	ENST00000556591	SPEN	Q96T58	3664 aa	Known RBP	-0.96	□□□□□ -2.56
CFAP54-208	ENST00000556591	DNAH7	Q8WXX0	4024 aa		-0.96	□□□□□ -2.56
CFAP54-208	ENST00000556591	LYNX1	G3V0Z9	82 aa		-0.96	□□□□□ -2.56
CFAP54-208	ENST00000556591	GYPA	P02724	150 aa		-0.96	□□□□□ -2.56
CFAP54-208	ENST00000556591	ANKRD26	Q9UPS8	1709 aa		-0.96	□□□□□ -2.56
CFAP54-208	ENST00000556591	RGPD3	A6NKT7	1758 aa	Predicted RBP	-0.96	□□□□□ -2.56
CFAP54-208	ENST00000556591	RGPD4	Q7Z3J3	1758 aa		-0.96	□□□□□ -2.56
CFAP54-208	ENST00000556591	NWD1	Q149M9	1564 aa		-0.96	□□□□□ -2.56
CFAP54-208	ENST00000556591	MYO3A	Q8NEV4	1616 aa		-0.97	□□□□□ -2.56
CFAP54-208	ENST00000556591	CEP162	Q5TB80	1403 aa		-0.97	□□□□□ -2.56
CFAP54-208	ENST00000556591	VPS8	Q8N3P4	1428 aa		-0.97	□□□□□ -2.56
CFAP54-208	ENST00000556591	ANKRD50	Q9ULJ7	1429 aa		-0.97	□□□□□ -2.56
CFAP54-208	ENST00000556591		S4R3F8	94 aa		-0.97	□□□□□ -2.56
CFAP54-208	ENST00000556591	DYNC1H1	Q14204	4646 aa	Known RBP	-0.97	□□□□□ -2.56
CFAP54-208	ENST00000556591	NES	P48681	1621 aa		-0.97	□□□□□ -2.57
CFAP54-208	ENST00000556591	DYNC2H1	Q8NCM8	4307 aa	Known RBP	-0.98	□□□□□ -2.57
CFAP54-208	ENST00000556591	MYMX	A0A1B0GTQ4	84 aa		-0.98	□□□□□ -2.57
CFAP54-208	ENST00000556591	SMIM11A	P58511	58 aa		-0.98	□□□□□ -2.57
CFAP54-208	ENST00000556591	TMEM131L	A2VDJ0	1609 aa		-0.98	□□□□□ -2.57
CFAP54-208	ENST00000556591	DEPDC5	O75140	1603 aa		-0.98	□□□□□ -2.57
CFAP54-208	ENST00000556591	LTN1	O94822	1766 aa		-0.98	□□□□□ -2.57
CFAP54-208	ENST00000556591	PEG3	Q9GZU2	1588 aa		-0.99	□□□□□ -2.57
CFAP54-208	ENST00000556591	CYB5A	P00167	134 aa		-0.99	□□□□□ -2.57
CFAP54-208	ENST00000556591	DEFB130B	P0DP73	79 aa		-0.99	□□□□□ -2.57
CFAP54-208	ENST00000556591	DEFB130A	P0DP74	79 aa		-0.99	□□□□□ -2.57
CFAP54-208	ENST00000556591	PEA15	Q15121	130 aa		-0.99	□□□□□ -2.57
CFAP54-208	ENST00000556591	PYY3	Q5JQD4	70 aa		-0.99	□□□□□ -2.57
CFAP54-208	ENST00000556591	SPTBN5	Q9NRC6	3674 aa	Known RBP	-0.99	□□□□□ -2.57
CFAP54-208	ENST00000556591	LRBA	P50851	2863 aa		-0.99	□□□□□ -2.57
CFAP54-208	ENST00000556591	RIF1	Q5UIP0	2472 aa	Known RBP	-0.99	□□□□□ -2.57
CFAP54-208	ENST00000556591	DIP2B	Q9P265	1576 aa		-1	□□□□□ -2.57
CFAP54-208	ENST00000556591	WFDC9	Q8NEX5	89 aa		-1	□□□□□ -2.57
CFAP54-208	ENST00000556591	RABAC1	Q9UI14	185 aa		-1	□□□□□ -2.57
CFAP54-208	ENST00000556591	NCOA2	Q15596	1464 aa		-1	□□□□□ -2.57
CFAP54-208	ENST00000556591	SRCAP	Q6ZRS2	3230 aa		-1.01	□□□□□ -2.57
CFAP54-208	ENST00000556591	PKIA	P61925	76 aa		-1.01	□□□□□ -2.57
CFAP54-208	ENST00000556591	KRTAP20-1	Q3LI63	56 aa		-1.01	□□□□□ -2.57
CFAP54-208	ENST00000556591	TLN2	Q9Y4G6	2542 aa		-1.01	□□□□□ -2.57
CFAP54-208	ENST00000556591	NDUFB1	O75438	58 aa		-1.02	□□□□□ -2.57
CFAP54-208	ENST00000556591	SNRPF	P62306	86 aa	Known RBP	-1.02	□□□□□ -2.57
CFAP54-208	ENST00000556591	LINC00643	Q86TS7	51 aa		-1.02	□□□□□ -2.57
CFAP54-208	ENST00000556591	PLIN4	Q96Q06	1357 aa		-1.02	□□□□□ -2.57
CFAP54-208	ENST00000556591	AKAP12	Q02952	1782 aa		-1.03	□□□□□ -2.57
CFAP54-208	ENST00000556591	CEBPZOS	A8MTT3	80 aa		-1.03	□□□□□ -2.57
CFAP54-208	ENST00000556591	S100A8	P05109	93 aa		-1.03	□□□□□ -2.57
CFAP54-208	ENST00000556591	IFI6	P09912	130 aa		-1.03	□□□□□ -2.57
CFAP54-208	ENST00000556591	DEFA5	Q01523	94 aa		-1.03	□□□□□ -2.57
CFAP54-208	ENST00000556591	DEFB110	Q30KQ9	67 aa		-1.03	□□□□□ -2.57
CFAP54-208	ENST00000556591	ARFGEF2	Q9Y6D5	1785 aa		-1.03	□□□□□ -2.58
CFAP54-208	ENST00000556591	ADGRG4	Q8IZF6	3080 aa		-1.04	□□□□□ -2.58
CFAP54-208	ENST00000556591	MAGI3	Q5TCQ9	1506 aa		-1.04	□□□□□ -2.58
CFAP54-208	ENST00000556591	CEP295	Q9C0D2	2601 aa		-1.04	□□□□□ -2.58
CFAP54-208	ENST00000556591	CSMD1	Q96PZ7	3565 aa		-1.04	□□□□□ -2.58
CFAP54-208	ENST00000556591	URB2	Q14146	1524 aa	Known RBP	-1.05	□□□□□ -2.58
CFAP54-208	ENST00000556591		K7EP34	96 aa		-1.05	□□□□□ -2.58
CFAP54-208	ENST00000556591	SMR3B	P02814	79 aa	Predicted RBP	-1.05	□□□□□ -2.58
CFAP54-208	ENST00000556591	ACYP1	P07311	99 aa		-1.05	□□□□□ -2.58
CFAP54-208	ENST00000556591	IAPP	P10997	89 aa		-1.05	□□□□□ -2.58
CFAP54-208	ENST00000556591	CCDC88B	A6NC98	1476 aa		-1.05	□□□□□ -2.58
CFAP54-208	ENST00000556591	CCNB3	Q8WWL7	1395 aa		-1.06	□□□□□ -2.58
CFAP54-208	ENST00000556591	UMAD1	C9J7I0	102 aa		-1.06	□□□□□ -2.58
CFAP54-208	ENST00000556591	DEFB1	P60022	68 aa		-1.06	□□□□□ -2.58
CFAP54-208	ENST00000556591	MT1X	P80297	61 aa		-1.06	□□□□□ -2.58
CFAP54-208	ENST00000556591	TDRG1	Q3Y452	100 aa		-1.06	□□□□□ -2.58
CFAP54-208	ENST00000556591	S100A16	Q96FQ6	103 aa	Known RBP	-1.06	□□□□□ -2.58

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