RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 XAGE1AQ9HD64 81 aa3.23□□□□□ -1.89
SRP54-211ENST00000556445 KRTAP21-3Q3LHN1 58 aa3.22□□□□□ -1.89
SRP54-211ENST00000556445 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
SRP54-211ENST00000556445 SMIM11BQ8TCY0 68 aa3.22□□□□□ -1.89
SRP54-211ENST00000556445 CLEC2BQ92478 149 aa3.22□□□□□ -1.89
SRP54-211ENST00000556445 C6orf48Q9UBA6 75 aa3.22□□□□□ -1.89
SRP54-211ENST00000556445 CUBNO60494 3623 aa3.22□□□□□ -1.89
SRP54-211ENST00000556445 NBEAL2Q6ZNJ1 2754 aa3.21□□□□□ -1.9
SRP54-211ENST00000556445 LECT2O14960 151 aa3.21□□□□□ -1.9
SRP54-211ENST00000556445 HIST1H4AP62805 103 aaKnown RBP3.21□□□□□ -1.9
SRP54-211ENST00000556445 C9orf116Q5BN46 136 aaPredicted RBP3.21□□□□□ -1.9
SRP54-211ENST00000556445 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
SRP54-211ENST00000556445 APLNQ9ULZ1 77 aa3.21□□□□□ -1.9
SRP54-211ENST00000556445 FAM236AA0A1B0GUQ0 79 aa3.2□□□□□ -1.9
SRP54-211ENST00000556445 FAM236BA0A1B0GV22 79 aa3.2□□□□□ -1.9
SRP54-211ENST00000556445 A6NED7 52 aa3.2□□□□□ -1.9
SRP54-211ENST00000556445 IGLV6-57P01721 117 aa3.2□□□□□ -1.9
SRP54-211ENST00000556445 ACYP1P07311 99 aa3.2□□□□□ -1.9
SRP54-211ENST00000556445 BAALC-AS2P0C853 105 aa3.2□□□□□ -1.9
SRP54-211ENST00000556445 NCR3O14931 201 aa3.19□□□□□ -1.9
SRP54-211ENST00000556445 PSCAO43653 123 aa3.19□□□□□ -1.9
SRP54-211ENST00000556445 DIRC1Q969H9 104 aa3.19□□□□□ -1.9
SRP54-211ENST00000556445 LINC00526Q96FQ7 95 aa3.19□□□□□ -1.9
SRP54-211ENST00000556445 ORMDL1Q9P0S3 153 aa3.19□□□□□ -1.9
SRP54-211ENST00000556445 FBN1P35555 2871 aaKnown RBP3.18□□□□□ -1.9
SRP54-211ENST00000556445 TRAV23DV6A0A075B6W5 121 aa3.18□□□□□ -1.9
SRP54-211ENST00000556445 JMJD7-PLA2G4BH0Y9G9 81 aa3.18□□□□□ -1.9
SRP54-211ENST00000556445 Q8N814 137 aa3.18□□□□□ -1.9
SRP54-211ENST00000556445 SPANXA2-OT1Q8N9U9 137 aa3.18□□□□□ -1.9
SRP54-211ENST00000556445 LINC00167Q96N53 147 aa3.18□□□□□ -1.9
SRP54-211ENST00000556445 MGAM2Q2M2H8 2515 aa3.18□□□□□ -1.9
SRP54-211ENST00000556445 NOTCH1P46531 2555 aa3.17□□□□□ -1.9
SRP54-211ENST00000556445 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.17□□□□□ -1.9
SRP54-211ENST00000556445 TRBV10-3A0A0K0K1G6 114 aa3.17□□□□□ -1.9
SRP54-211ENST00000556445 TEX49A0A1B0GTD5 131 aa3.17□□□□□ -1.9
SRP54-211ENST00000556445 hADV29S1A0JD25 119 aa3.17□□□□□ -1.9
SRP54-211ENST00000556445 COX7BP24311 80 aa3.17□□□□□ -1.9
SRP54-211ENST00000556445 CNBPP62633 177 aaKnown RBP3.17□□□□□ -1.9
SRP54-211ENST00000556445 LINC00575Q6W349 94 aa3.17□□□□□ -1.9
SRP54-211ENST00000556445 NBDYA0A0U1RRE5 68 aa3.16□□□□□ -1.9
SRP54-211ENST00000556445 A8MUU9 505 aa3.16□□□□□ -1.9
SRP54-211ENST00000556445 C3orf84H3BNL1 204 aa3.16□□□□□ -1.9
SRP54-211ENST00000556445 CCDC179H3BU77 68 aa3.16□□□□□ -1.9
SRP54-211ENST00000556445 PDE6GP18545 87 aa3.16□□□□□ -1.9
SRP54-211ENST00000556445 ELOF1P60002 83 aaKnown RBP3.16□□□□□ -1.9
SRP54-211ENST00000556445 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.16□□□□□ -1.9
SRP54-211ENST00000556445 SDIM1Q6ZPB5 146 aa3.16□□□□□ -1.9
SRP54-211ENST00000556445 SMCR5Q8TEV8 140 aa3.16□□□□□ -1.9
SRP54-211ENST00000556445 TENM3Q9P273 2699 aa3.15□□□□□ -1.91
SRP54-211ENST00000556445 UQCRQO14949 82 aa3.15□□□□□ -1.91
SRP54-211ENST00000556445 Q5W150 140 aa3.15□□□□□ -1.91
SRP54-211ENST00000556445 Q6ZR54 194 aa3.15□□□□□ -1.91
SRP54-211ENST00000556445 C7orf65Q6ZTY9 151 aa3.15□□□□□ -1.91
SRP54-211ENST00000556445 DPH3Q96FX2 82 aa3.15□□□□□ -1.91
SRP54-211ENST00000556445 KCNQ1DNQ9H478 68 aa3.15□□□□□ -1.91
SRP54-211ENST00000556445 LINC00474Q9P2X8 69 aa3.15□□□□□ -1.91
SRP54-211ENST00000556445 C16orf90A8MZG2 172 aa3.14□□□□□ -1.91
SRP54-211ENST00000556445 Q8NDZ9 215 aa3.14□□□□□ -1.91
SRP54-211ENST00000556445 OBSCN-AS1Q96MR7 158 aa3.14□□□□□ -1.91
SRP54-211ENST00000556445 ETDCA0A1B0GVM5 59 aa3.13□□□□□ -1.91
SRP54-211ENST00000556445 RBM3P98179 157 aaKnown RBP3.13□□□□□ -1.91
SRP54-211ENST00000556445 C9orf163Q8N9P6 203 aa3.13□□□□□ -1.91
SRP54-211ENST00000556445 TRRAPQ9Y4A5 3859 aa3.13□□□□□ -1.91
SRP54-211ENST00000556445 NBEAL1Q6ZS30 2694 aa3.13□□□□□ -1.91
SRP54-211ENST00000556445 CCKP06307 115 aa3.12□□□□□ -1.91
SRP54-211ENST00000556445 KRTAP1-4P0C5Y4 121 aa3.12□□□□□ -1.91
SRP54-211ENST00000556445 DEFB116Q30KQ4 102 aa3.12□□□□□ -1.91
SRP54-211ENST00000556445 Q6ZQY7 126 aa3.12□□□□□ -1.91
SRP54-211ENST00000556445 LINC00643Q86TS7 51 aa3.12□□□□□ -1.91
SRP54-211ENST00000556445 C22orf24Q9Y442 160 aa3.12□□□□□ -1.91
SRP54-211ENST00000556445 PKD1L1Q8TDX9 2849 aa3.12□□□□□ -1.91
SRP54-211ENST00000556445 LOC110117498A0A087WWA1 95 aa3.11□□□□□ -1.91
SRP54-211ENST00000556445 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
SRP54-211ENST00000556445 SPRR1AP35321 89 aa3.11□□□□□ -1.91
SRP54-211ENST00000556445 TMEM258P61165 79 aa3.11□□□□□ -1.91
SRP54-211ENST00000556445 Q6ZRX8 168 aa3.11□□□□□ -1.91
SRP54-211ENST00000556445 DSCR8Q96T75 97 aa3.11□□□□□ -1.91
SRP54-211ENST00000556445 C14orf132Q9NPU4 83 aa3.11□□□□□ -1.91
SRP54-211ENST00000556445 A0A096LNI7 61 aa3.1□□□□□ -1.91
SRP54-211ENST00000556445 LRCOL1A6NCL2 159 aa3.1□□□□□ -1.91
SRP54-211ENST00000556445 A8MU10 97 aa3.1□□□□□ -1.91
SRP54-211ENST00000556445 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
SRP54-211ENST00000556445 FAM229BQ4G0N7 80 aa3.1□□□□□ -1.91
SRP54-211ENST00000556445 Q6ZRN7 208 aaPredicted RBP3.1□□□□□ -1.91
SRP54-211ENST00000556445 UBL5Q9BZL1 73 aa3.1□□□□□ -1.91
SRP54-211ENST00000556445 TRBV7-7A0A0K0K1E9 115 aa3.09□□□□□ -1.91
SRP54-211ENST00000556445 ZNF861PO60384 105 aa3.09□□□□□ -1.91
SRP54-211ENST00000556445 MT-ATP8P03928 68 aa3.09□□□□□ -1.91
SRP54-211ENST00000556445 C1orf134Q5TEV5 83 aa3.09□□□□□ -1.91
SRP54-211ENST00000556445 ATP5EP2Q5VTU8 51 aa3.09□□□□□ -1.91
SRP54-211ENST00000556445 C1orf64Q8NEQ6 169 aa3.09□□□□□ -1.91
SRP54-211ENST00000556445 STAB2Q8WWQ8 2551 aa3.08□□□□□ -1.92
SRP54-211ENST00000556445 A0A087WTM6 91 aa3.08□□□□□ -1.92
SRP54-211ENST00000556445 IGKV2-24A0A0C4DH68 120 aa3.08□□□□□ -1.92
SRP54-211ENST00000556445 TRBV7-4A0A0J9YYF1 115 aa3.08□□□□□ -1.92
SRP54-211ENST00000556445 M0R2N4 97 aa3.08□□□□□ -1.92
SRP54-211ENST00000556445 Q6ZQT0 140 aa3.08□□□□□ -1.92
SRP54-211ENST00000556445 DNAH3Q8TD57 4116 aa3.08□□□□□ -1.92
SRP54-211ENST00000556445 F8WEM9 126 aa3.07□□□□□ -1.92
SRP54-211ENST00000556445 PANO1I0J062 215 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms