RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 MOBPQ13875 183 aa8.27□□□□□ -1.09
VIPAS39-208ENST00000556412 LAMTOR3Q9UHA4 124 aa8.27□□□□□ -1.09
VIPAS39-208ENST00000556412 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
VIPAS39-208ENST00000556412 A0A1B0GX51 115 aa8.26□□□□□ -1.09
VIPAS39-208ENST00000556412 TAX1BP3O14907 124 aa8.26□□□□□ -1.09
VIPAS39-208ENST00000556412 Q8N377 158 aa8.26□□□□□ -1.09
VIPAS39-208ENST00000556412 C9orf118A6NHY6 69 aa8.24□□□□□ -1.09
VIPAS39-208ENST00000556412 LYRM7Q5U5X0 104 aa8.24□□□□□ -1.09
VIPAS39-208ENST00000556412 LST1O00453 97 aa8.23□□□□□ -1.09
VIPAS39-208ENST00000556412 OCIAD2Q56VL3 154 aa8.23□□□□□ -1.09
VIPAS39-208ENST00000556412 FABP2P12104 132 aa8.22□□□□□ -1.09
VIPAS39-208ENST00000556412 SMIM29Q86T20 159 aa8.22□□□□□ -1.09
VIPAS39-208ENST00000556412 Q8NBF4 154 aa8.22□□□□□ -1.09
VIPAS39-208ENST00000556412 F8WEM9 126 aa8.22□□□□□ -1.09
VIPAS39-208ENST00000556412 TCL1BO95988 128 aa8.22□□□□□ -1.09
VIPAS39-208ENST00000556412 ATXN8Q156A1 80 aa8.22□□□□□ -1.09
VIPAS39-208ENST00000556412 TRACP01848 142 aa8.21□□□□□ -1.1
VIPAS39-208ENST00000556412 ORMDL1Q9P0S3 153 aa8.21□□□□□ -1.1
VIPAS39-208ENST00000556412 A0A1W2PPM0 123 aa8.2□□□□□ -1.1
VIPAS39-208ENST00000556412 GHRHP01286 108 aa8.2□□□□□ -1.1
VIPAS39-208ENST00000556412 LINC00304Q8N9R0 145 aa8.2□□□□□ -1.1
VIPAS39-208ENST00000556412 PPDPFLQ8WWR9 84 aa8.2□□□□□ -1.1
VIPAS39-208ENST00000556412 SSBP3-AS1Q7Z2R9 100 aa8.19□□□□□ -1.1
VIPAS39-208ENST00000556412 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
VIPAS39-208ENST00000556412 DMBT1Q9UGM3 2413 aaPredicted RBP8.18□□□□□ -1.1
VIPAS39-208ENST00000556412 TRBV20-1A0A075B6N2 111 aa8.17□□□□□ -1.1
VIPAS39-208ENST00000556412 NDUFV3P56181 108 aaKnown RBP8.16□□□□□ -1.1
VIPAS39-208ENST00000556412 A0A0G2JQZ4 141 aa8.15□□□□□ -1.1
VIPAS39-208ENST00000556412 A0A1B0GV72 72 aa8.15□□□□□ -1.1
VIPAS39-208ENST00000556412 TMEM256-PLSCR3K7ERE1 68 aa8.15□□□□□ -1.11
VIPAS39-208ENST00000556412 HRCT1Q6UXD1 115 aa8.15□□□□□ -1.11
VIPAS39-208ENST00000556412 H3BQ85 93 aa8.14□□□□□ -1.11
VIPAS39-208ENST00000556412 SPCS1Q9Y6A9 102 aa8.14□□□□□ -1.11
VIPAS39-208ENST00000556412 BAALC-AS2P0C853 105 aa8.13□□□□□ -1.11
VIPAS39-208ENST00000556412 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
VIPAS39-208ENST00000556412 VPS25Q9BRG1 176 aa8.13□□□□□ -1.11
VIPAS39-208ENST00000556412 TNXBP22105 4242 aa8.13□□□□□ -1.11
VIPAS39-208ENST00000556412 C9JAW5 83 aa8.13□□□□□ -1.11
VIPAS39-208ENST00000556412 H3BMG7 143 aa8.13□□□□□ -1.11
VIPAS39-208ENST00000556412 K7ERU9 68 aa8.11□□□□□ -1.11
VIPAS39-208ENST00000556412 GTF2H5Q6ZYL4 71 aa8.1□□□□□ -1.11
VIPAS39-208ENST00000556412 SPINK1P00995 79 aa8.1□□□□□ -1.11
VIPAS39-208ENST00000556412 Q6JHZ5 121 aa8.1□□□□□ -1.11
VIPAS39-208ENST00000556412 IGFL1Q6UW32 110 aa8.1□□□□□ -1.11
VIPAS39-208ENST00000556412 MTURNQ8N3F0 131 aa8.1□□□□□ -1.11
VIPAS39-208ENST00000556412 ANKRD29Q8N6D5 301 aa8.1□□□□□ -1.11
VIPAS39-208ENST00000556412 IGLV8-61A0A075B6I0 122 aa8.09□□□□□ -1.11
VIPAS39-208ENST00000556412 K7EP34 96 aa8.08□□□□□ -1.12
VIPAS39-208ENST00000556412 HERC1Q15751 4861 aa8.08□□□□□ -1.12
VIPAS39-208ENST00000556412 RETNLBQ9BQ08 111 aa8.06□□□□□ -1.12
VIPAS39-208ENST00000556412 SCGB1A1P11684 91 aa8.04□□□□□ -1.12
VIPAS39-208ENST00000556412 CD164Q04900 197 aa8.04□□□□□ -1.12
VIPAS39-208ENST00000556412 RBM3P98179 157 aaKnown RBP8.03□□□□□ -1.12
VIPAS39-208ENST00000556412 LIMD2Q9BT23 127 aa8.03□□□□□ -1.12
VIPAS39-208ENST00000556412 H3BT86 120 aa8.02□□□□□ -1.13
VIPAS39-208ENST00000556412 RPS29P62273 56 aaKnown RBP8.02□□□□□ -1.13
VIPAS39-208ENST00000556412 PRR4Q16378 134 aa8.02□□□□□ -1.13
VIPAS39-208ENST00000556412 DSCR8Q96T75 97 aa8.01□□□□□ -1.13
VIPAS39-208ENST00000556412 TRBV7-7A0A0K0K1E9 115 aa7.99□□□□□ -1.13
VIPAS39-208ENST00000556412 JMJD7-PLA2G4BH0Y9G9 81 aa7.99□□□□□ -1.13
VIPAS39-208ENST00000556412 TEN1Q86WV5 123 aa7.99□□□□□ -1.13
VIPAS39-208ENST00000556412 A0A1W2PNM2 257 aa7.98□□□□□ -1.13
VIPAS39-208ENST00000556412 CCKP06307 115 aa7.98□□□□□ -1.13
VIPAS39-208ENST00000556412 TRBV7-4A0A0J9YYF1 115 aa7.97□□□□□ -1.13
VIPAS39-208ENST00000556412 C14orf132Q9NPU4 83 aa7.97□□□□□ -1.13
VIPAS39-208ENST00000556412 A0A087WSZ3 146 aa7.96□□□□□ -1.14
VIPAS39-208ENST00000556412 SMCPP49901 116 aaPredicted RBP7.96□□□□□ -1.14
VIPAS39-208ENST00000556412 Q6Q795 121 aa7.96□□□□□ -1.14
VIPAS39-208ENST00000556412 PRO0461Q9UI25 63 aa7.95□□□□□ -1.14
VIPAS39-208ENST00000556412 F8W1H4 67 aa7.94□□□□□ -1.14
VIPAS39-208ENST00000556412 Q5XG85 94 aa7.94□□□□□ -1.14
VIPAS39-208ENST00000556412 OBSCN-AS1Q96MR7 158 aa7.93□□□□□ -1.14
VIPAS39-208ENST00000556412 IGLV7-46A0A075B6I9 117 aa7.92□□□□□ -1.14
VIPAS39-208ENST00000556412 LOC110117498A0A087WWA1 95 aa7.92□□□□□ -1.14
VIPAS39-208ENST00000556412 Q6ZQT0 140 aa7.92□□□□□ -1.14
VIPAS39-208ENST00000556412 SS18L2Q9UHA2 77 aa7.92□□□□□ -1.14
VIPAS39-208ENST00000556412 HMCN2Q8NDA2 5059 aa7.9□□□□□ -1.14
VIPAS39-208ENST00000556412 PDE6GP18545 87 aa7.9□□□□□ -1.14
VIPAS39-208ENST00000556412 C1orf195Q5TG92 126 aa7.9□□□□□ -1.14
VIPAS39-208ENST00000556412 FP248Q71RG6 208 aaPredicted RBP7.9□□□□□ -1.14
VIPAS39-208ENST00000556412 J3QR89 54 aa7.87□□□□□ -1.15
VIPAS39-208ENST00000556412 SIGMAR1Q99720 223 aa7.87□□□□□ -1.15
VIPAS39-208ENST00000556412 ASB16-AS1Q495Z4 193 aa7.87□□□□□ -1.15
VIPAS39-208ENST00000556412 ETDBQ3ZM63 59 aa7.85□□□□□ -1.15
VIPAS39-208ENST00000556412 TPRXLQ17RH7 258 aa7.81□□□□□ -1.16
VIPAS39-208ENST00000556412 DEFB116Q30KQ4 102 aa7.81□□□□□ -1.16
VIPAS39-208ENST00000556412 CDIP1Q9H305 208 aa7.81□□□□□ -1.16
VIPAS39-208ENST00000556412 Q96NJ1 140 aa7.8□□□□□ -1.16
VIPAS39-208ENST00000556412 A0A1B0GW54 56 aa7.8□□□□□ -1.16
VIPAS39-208ENST00000556412 C9orf92A6NGG3 77 aa7.79□□□□□ -1.16
VIPAS39-208ENST00000556412 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
VIPAS39-208ENST00000556412 IGKV4-1P06312 121 aa7.78□□□□□ -1.16
VIPAS39-208ENST00000556412 LINC00472Q9H8W2 130 aa7.78□□□□□ -1.16
VIPAS39-208ENST00000556412 NREPQ16612 68 aa7.76□□□□□ -1.17
VIPAS39-208ENST00000556412 LPAP08519 4548 aa7.75□□□□□ -1.17
VIPAS39-208ENST00000556412 LRP2P98164 4655 aa7.72□□□□□ -1.17
VIPAS39-208ENST00000556412 J3KT08 172 aa7.71□□□□□ -1.18
VIPAS39-208ENST00000556412 LINC00846Q9NV44 126 aa7.7□□□□□ -1.18
VIPAS39-208ENST00000556412 XP32Q5T750 250 aa7.69□□□□□ -1.18
VIPAS39-208ENST00000556412 Q6ZVQ6 151 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms