RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 FAM236BA0A1B0GV22 79 aa2.56□□□□□ -2
ATXN3-240ENST00000556339 LRCOL1A6NCL2 159 aa2.56□□□□□ -2
ATXN3-240ENST00000556339 F8WDY8 70 aa2.56□□□□□ -2
ATXN3-240ENST00000556339 CCDC179H3BU77 68 aa2.56□□□□□ -2
ATXN3-240ENST00000556339 CCKP06307 115 aa2.56□□□□□ -2
ATXN3-240ENST00000556339 CRYGAP11844 174 aa2.56□□□□□ -2
ATXN3-240ENST00000556339 COX7CP15954 63 aa2.56□□□□□ -2
ATXN3-240ENST00000556339 CFAP161Q6P656 301 aa2.56□□□□□ -2
ATXN3-240ENST00000556339 FAM218AQ96MZ4 157 aa2.56□□□□□ -2
ATXN3-240ENST00000556339 KLK12Q9UKR0 248 aa2.56□□□□□ -2
ATXN3-240ENST00000556339 C22orf24Q9Y442 160 aa2.56□□□□□ -2
ATXN3-240ENST00000556339 APOBP04114 4563 aaKnown RBP2.56□□□□□ -2
ATXN3-240ENST00000556339 IGLV4-60A0A075B6I1 120 aa2.55□□□□□ -2
ATXN3-240ENST00000556339 GVQW2A0A096LPI5 108 aaPredicted RBP2.55□□□□□ -2
ATXN3-240ENST00000556339 TRBV7-6A0A0J9YX20 115 aa2.55□□□□□ -2
ATXN3-240ENST00000556339 A0A0U1RRA0 63 aa2.55□□□□□ -2
ATXN3-240ENST00000556339 NDUFC2-KCTD14E9PQ53 114 aa2.55□□□□□ -2
ATXN3-240ENST00000556339 RPL18AQ02543 176 aaKnown RBP2.55□□□□□ -2
ATXN3-240ENST00000556339 GAGE2AQ6NT46 116 aa2.55□□□□□ -2
ATXN3-240ENST00000556339 SMIM20Q8N5G0 67 aa2.55□□□□□ -2
ATXN3-240ENST00000556339 OR13C6PQ8NH95 151 aa2.55□□□□□ -2
ATXN3-240ENST00000556339 TOMM7Q9P0U1 55 aa2.55□□□□□ -2
ATXN3-240ENST00000556339 VPS13BQ7Z7G8 4022 aa2.55□□□□□ -2
ATXN3-240ENST00000556339 IGLV7-46A0A075B6I9 117 aa2.54□□□□□ -2
ATXN3-240ENST00000556339 LOC110117498A0A087WWA1 95 aa2.54□□□□□ -2
ATXN3-240ENST00000556339 hADV29S1A0JD25 119 aa2.54□□□□□ -2
ATXN3-240ENST00000556339 ANGP03950 147 aaKnown RBP2.54□□□□□ -2
ATXN3-240ENST00000556339 KIAA0087Q14695 138 aa2.54□□□□□ -2
ATXN3-240ENST00000556339 C9orf153Q5TBE3 101 aa2.54□□□□□ -2
ATXN3-240ENST00000556339 SERP2Q8N6R1 65 aa2.54□□□□□ -2
ATXN3-240ENST00000556339 SMCR5Q8TEV8 140 aa2.54□□□□□ -2
ATXN3-240ENST00000556339 UBL5Q9BZL1 73 aa2.54□□□□□ -2
ATXN3-240ENST00000556339 SS18L2Q9UHA2 77 aa2.54□□□□□ -2
ATXN3-240ENST00000556339 A0A1B0GW54 56 aa2.53□□□□□ -2
ATXN3-240ENST00000556339 PFN2P35080 140 aa2.53□□□□□ -2
ATXN3-240ENST00000556339 KRTAP10-8P60410 259 aa2.53□□□□□ -2
ATXN3-240ENST00000556339 TMEM258P61165 79 aa2.53□□□□□ -2
ATXN3-240ENST00000556339 LINC00575Q6W349 94 aa2.53□□□□□ -2
ATXN3-240ENST00000556339 C2orf48Q96LS8 159 aa2.53□□□□□ -2
ATXN3-240ENST00000556339 PRR34Q9NV39 138 aa2.53□□□□□ -2
ATXN3-240ENST00000556339 FAT1Q14517 4588 aa2.53□□□□□ -2
ATXN3-240ENST00000556339 USP17L23D6RBM5 183 aa2.52□□□□□ -2.01
ATXN3-240ENST00000556339 J3KT08 172 aa2.52□□□□□ -2.01
ATXN3-240ENST00000556339 IGLV6-57P01721 117 aa2.52□□□□□ -2.01
ATXN3-240ENST00000556339 XCL1P47992 114 aa2.52□□□□□ -2.01
ATXN3-240ENST00000556339 RBM3P98179 157 aaKnown RBP2.52□□□□□ -2.01
ATXN3-240ENST00000556339 REG3AQ06141 175 aa2.52□□□□□ -2.01
ATXN3-240ENST00000556339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.52□□□□□ -2.01
ATXN3-240ENST00000556339 CHCHD10Q8WYQ3 142 aaPredicted RBP2.52□□□□□ -2.01
ATXN3-240ENST00000556339 C14orf132Q9NPU4 83 aa2.52□□□□□ -2.01
ATXN3-240ENST00000556339 LINC00846Q9NV44 126 aa2.52□□□□□ -2.01
ATXN3-240ENST00000556339 IGKV3OR2-268A0A0C4DH90 116 aa2.51□□□□□ -2.01
ATXN3-240ENST00000556339 LOC107984640A0A0U1RRK4 108 aa2.51□□□□□ -2.01
ATXN3-240ENST00000556339 RPL37AP61513 92 aaKnown RBP2.51□□□□□ -2.01
ATXN3-240ENST00000556339 CXCL6P80162 114 aa2.51□□□□□ -2.01
ATXN3-240ENST00000556339 CLPSL2Q6UWE3 100 aa2.51□□□□□ -2.01
ATXN3-240ENST00000556339 SCXQ7RTU7 201 aa2.51□□□□□ -2.01
ATXN3-240ENST00000556339 LINC00269Q8N2A0 174 aa2.51□□□□□ -2.01
ATXN3-240ENST00000556339 CIRBP-AS1Q8TBR5 109 aa2.51□□□□□ -2.01
ATXN3-240ENST00000556339 DSCR8Q96T75 97 aa2.51□□□□□ -2.01
ATXN3-240ENST00000556339 MYCBP2O75592 4640 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 IGLV10-54A0A075B6I4 117 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 A8MU10 97 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 NCR3O14931 201 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 NDUFC1O43677 76 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 OXTP01178 125 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 SPAG11BQ08648 103 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 C6orf99Q4VX62 202 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 ENHOQ6UWT2 76 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 Q6ZQT0 140 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 Q6ZSA8 131 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 DIRC1Q969H9 104 aa2.5□□□□□ -2.01
ATXN3-240ENST00000556339 TRAV7A0A075B6U4 112 aa2.49□□□□□ -2.01
ATXN3-240ENST00000556339 M0R378 163 aa2.49□□□□□ -2.01
ATXN3-240ENST00000556339 ERC2-IT1O76042 136 aa2.49□□□□□ -2.01
ATXN3-240ENST00000556339 ATP5EP56381 51 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-240ENST00000556339 PRAC1Q96KF2 57 aa2.49□□□□□ -2.01
ATXN3-240ENST00000556339 TRAV23DV6A0A075B6W5 121 aa2.48□□□□□ -2.01
ATXN3-240ENST00000556339 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
ATXN3-240ENST00000556339 TRBV7-4A0A0J9YYF1 115 aa2.48□□□□□ -2.01
ATXN3-240ENST00000556339 ZNF73O43830 326 aaPredicted RBP2.48□□□□□ -2.01
ATXN3-240ENST00000556339 COX7BP24311 80 aa2.48□□□□□ -2.01
ATXN3-240ENST00000556339 ELOF1P60002 83 aaKnown RBP2.48□□□□□ -2.01
ATXN3-240ENST00000556339 C9orf129Q5T035 196 aaKnown RBP2.48□□□□□ -2.01
ATXN3-240ENST00000556339 C9orf163Q8N9P6 203 aa2.48□□□□□ -2.01
ATXN3-240ENST00000556339 C7orf33Q8WU49 177 aa2.48□□□□□ -2.01
ATXN3-240ENST00000556339 LAMTOR3Q9UHA4 124 aa2.48□□□□□ -2.01
ATXN3-240ENST00000556339 DNAH8Q96JB1 4490 aa2.48□□□□□ -2.01
ATXN3-240ENST00000556339 TLX1NBP0CAT3 122 aa2.47□□□□□ -2.01
ATXN3-240ENST00000556339 KLKP1Q107X0 134 aa2.47□□□□□ -2.01
ATXN3-240ENST00000556339 UNQ6190/PRO20217Q6UXQ8 127 aa2.47□□□□□ -2.01
ATXN3-240ENST00000556339 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
ATXN3-240ENST00000556339 IGKV2-24A0A0C4DH68 120 aa2.46□□□□□ -2.02
ATXN3-240ENST00000556339 VPREB1P12018 145 aa2.46□□□□□ -2.02
ATXN3-240ENST00000556339 PRR3P79522 188 aaKnown RBP2.46□□□□□ -2.02
ATXN3-240ENST00000556339 HIGD2BQ4VC39 106 aa2.46□□□□□ -2.02
ATXN3-240ENST00000556339 C5orf47Q569G3 176 aa2.46□□□□□ -2.02
ATXN3-240ENST00000556339 Q6ZQY7 126 aa2.46□□□□□ -2.02
ATXN3-240ENST00000556339 Q6ZRU5 148 aa2.46□□□□□ -2.02
ATXN3-240ENST00000556339 Q6ZVQ6 151 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms