RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 ETDCA0A1B0GVM5 59 aa2.8□□□□□ -1.96
ATXN3-238ENST00000556288 H0Y9J4 135 aa2.8□□□□□ -1.96
ATXN3-238ENST00000556288 Q6ZVH6 145 aa2.8□□□□□ -1.96
ATXN3-238ENST00000556288 PCP2Q8IVA1 136 aa2.8□□□□□ -1.96
ATXN3-238ENST00000556288 MTURNQ8N3F0 131 aa2.8□□□□□ -1.96
ATXN3-238ENST00000556288 Q8NDZ9 215 aa2.8□□□□□ -1.96
ATXN3-238ENST00000556288 LINC01600Q96MT4 127 aa2.8□□□□□ -1.96
ATXN3-238ENST00000556288 HIGD2AQ9BW72 106 aa2.8□□□□□ -1.96
ATXN3-238ENST00000556288 TMEM126AQ9H061 195 aa2.8□□□□□ -1.96
ATXN3-238ENST00000556288 SPANXB1Q9NS25 103 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-238ENST00000556288 ANAPC11Q9NYG5 84 aa2.8□□□□□ -1.96
ATXN3-238ENST00000556288 TRBV10-3A0A0K0K1G6 114 aa2.79□□□□□ -1.96
ATXN3-238ENST00000556288 FXYD2P54710 66 aa2.79□□□□□ -1.96
ATXN3-238ENST00000556288 NDUFV3P56181 108 aaKnown RBP2.79□□□□□ -1.96
ATXN3-238ENST00000556288 Q6ZVQ6 151 aa2.79□□□□□ -1.96
ATXN3-238ENST00000556288 LINC00308Q8TCZ7 52 aa2.79□□□□□ -1.96
ATXN3-238ENST00000556288 HIST1H4GQ99525 98 aa2.79□□□□□ -1.96
ATXN3-238ENST00000556288 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
ATXN3-238ENST00000556288 H3BMG7 143 aa2.78□□□□□ -1.96
ATXN3-238ENST00000556288 TSPAN13O95857 204 aa2.78□□□□□ -1.96
ATXN3-238ENST00000556288 MUSTN1Q8IVN3 82 aa2.78□□□□□ -1.96
ATXN3-238ENST00000556288 SMCR5Q8TEV8 140 aa2.78□□□□□ -1.96
ATXN3-238ENST00000556288 PPDPFQ9H3Y8 114 aa2.78□□□□□ -1.96
ATXN3-238ENST00000556288 NHP2Q9NX24 153 aaKnown RBP2.78□□□□□ -1.96
ATXN3-238ENST00000556288 DNAH8Q96JB1 4490 aa2.78□□□□□ -1.97
ATXN3-238ENST00000556288 VPS13BQ7Z7G8 4022 aa2.77□□□□□ -1.97
ATXN3-238ENST00000556288 TIMM17BO60830 172 aa2.77□□□□□ -1.97
ATXN3-238ENST00000556288 CRYGAP11844 174 aa2.77□□□□□ -1.97
ATXN3-238ENST00000556288 KRTAP10-8P60410 259 aa2.77□□□□□ -1.97
ATXN3-238ENST00000556288 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
ATXN3-238ENST00000556288 SOSTDC1Q6X4U4 206 aa2.77□□□□□ -1.97
ATXN3-238ENST00000556288 TYMSOSQ8TAI1 123 aa2.77□□□□□ -1.97
ATXN3-238ENST00000556288 COPS9Q8WXC6 57 aa2.77□□□□□ -1.97
ATXN3-238ENST00000556288 RAB37Q96AX2 223 aa2.77□□□□□ -1.97
ATXN3-238ENST00000556288 SPANXDQ9BXN6 97 aa2.77□□□□□ -1.97
ATXN3-238ENST00000556288 TRAV23DV6A0A075B6W5 121 aa2.76□□□□□ -1.97
ATXN3-238ENST00000556288 TRBV10-2A0A0K0K1G8 114 aa2.76□□□□□ -1.97
ATXN3-238ENST00000556288 A0A1B0GV72 72 aa2.76□□□□□ -1.97
ATXN3-238ENST00000556288 NDUFC2O95298 119 aa2.76□□□□□ -1.97
ATXN3-238ENST00000556288 MT1HL1P0DM35 61 aa2.76□□□□□ -1.97
ATXN3-238ENST00000556288 DEFB105AQ8NG35 78 aa2.76□□□□□ -1.97
ATXN3-238ENST00000556288 OCR1Q9BZK8 76 aa2.76□□□□□ -1.97
ATXN3-238ENST00000556288 KCNQ1DNQ9H478 68 aa2.76□□□□□ -1.97
ATXN3-238ENST00000556288 SPANXCQ9NY87 97 aa2.76□□□□□ -1.97
ATXN3-238ENST00000556288 PRO0461Q9UI25 63 aa2.76□□□□□ -1.97
ATXN3-238ENST00000556288 A0A0B4J2C4 111 aa2.75□□□□□ -1.97
ATXN3-238ENST00000556288 LOC107984156A0A0G2JMH3 177 aa2.75□□□□□ -1.97
ATXN3-238ENST00000556288 ZNF73O43830 326 aaPredicted RBP2.75□□□□□ -1.97
ATXN3-238ENST00000556288 IFITM1P13164 125 aa2.75□□□□□ -1.97
ATXN3-238ENST00000556288 RPL13AP40429 203 aaKnown RBP2.75□□□□□ -1.97
ATXN3-238ENST00000556288 ARL17AQ8IVW1 177 aa2.75□□□□□ -1.97
ATXN3-238ENST00000556288 LINC00337Q8N6G1 96 aa2.75□□□□□ -1.97
ATXN3-238ENST00000556288 PPDPFLQ8WWR9 84 aa2.75□□□□□ -1.97
ATXN3-238ENST00000556288 ZNF706Q9Y5V0 76 aaPredicted RBP2.75□□□□□ -1.97
ATXN3-238ENST00000556288 H7C2G1 150 aa2.74□□□□□ -1.97
ATXN3-238ENST00000556288 K7ERJ3 54 aa2.74□□□□□ -1.97
ATXN3-238ENST00000556288 IGLV6-57P01721 117 aa2.74□□□□□ -1.97
ATXN3-238ENST00000556288 KRTAP1-4P0C5Y4 121 aa2.74□□□□□ -1.97
ATXN3-238ENST00000556288 COX7BP24311 80 aa2.74□□□□□ -1.97
ATXN3-238ENST00000556288 PRR4Q16378 134 aa2.74□□□□□ -1.97
ATXN3-238ENST00000556288 TEN1Q86WV5 123 aa2.74□□□□□ -1.97
ATXN3-238ENST00000556288 PRO1854Q9UHT4 67 aa2.74□□□□□ -1.97
ATXN3-238ENST00000556288 FAT1Q14517 4588 aa2.74□□□□□ -1.97
ATXN3-238ENST00000556288 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
ATXN3-238ENST00000556288 A4D1N5 150 aa2.73□□□□□ -1.97
ATXN3-238ENST00000556288 ERC2-IT1O76042 136 aa2.73□□□□□ -1.97
ATXN3-238ENST00000556288 COX6CP09669 75 aa2.73□□□□□ -1.97
ATXN3-238ENST00000556288 SCGB1C2P0DMR2 95 aa2.73□□□□□ -1.97
ATXN3-238ENST00000556288 ETDBQ3ZM63 59 aa2.73□□□□□ -1.97
ATXN3-238ENST00000556288 C6orf99Q4VX62 202 aa2.73□□□□□ -1.97
ATXN3-238ENST00000556288 C9orf153Q5TBE3 101 aa2.73□□□□□ -1.97
ATXN3-238ENST00000556288 KRTAP13-1Q8IUC0 172 aa2.73□□□□□ -1.97
ATXN3-238ENST00000556288 C3orf22Q8N5N4 141 aa2.73□□□□□ -1.97
ATXN3-238ENST00000556288 SPRR4Q96PI1 79 aa2.73□□□□□ -1.97
ATXN3-238ENST00000556288 PKHD1L1Q86WI1 4243 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 TRAV13-2A0A0B4J235 113 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 SPRR1AP35321 89 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 PSMB2P49721 201 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 ATXN8Q156A1 80 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 FAM229BQ4G0N7 80 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 KRTAP13-2Q52LG2 175 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 Q6Q795 121 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 Q6ZRX8 168 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 LINC00304Q8N9R0 145 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 ST20-AS1Q8NBB2 130 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 NAA38Q9BRA0 125 aaKnown RBP2.72□□□□□ -1.97
ATXN3-238ENST00000556288 Q9BRP9 147 aa2.72□□□□□ -1.97
ATXN3-238ENST00000556288 FAM240AA0A1B0GVK7 77 aa2.71□□□□□ -1.98
ATXN3-238ENST00000556288 KRTAP4-16G5E9R7 235 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-238ENST00000556288 H3BT86 120 aa2.71□□□□□ -1.98
ATXN3-238ENST00000556288 SLC25A20O43772 301 aa2.71□□□□□ -1.98
ATXN3-238ENST00000556288 MOBPQ13875 183 aa2.71□□□□□ -1.98
ATXN3-238ENST00000556288 Q1RN00 199 aa2.71□□□□□ -1.98
ATXN3-238ENST00000556288 HRCT1Q6UXD1 115 aa2.71□□□□□ -1.98
ATXN3-238ENST00000556288 SMIM11BQ8TCY0 68 aa2.71□□□□□ -1.98
ATXN3-238ENST00000556288 RETNLBQ9BQ08 111 aa2.71□□□□□ -1.98
ATXN3-238ENST00000556288 DHRS4-AS1Q9P1J3 65 aa2.71□□□□□ -1.98
ATXN3-238ENST00000556288 TCL1BO95988 128 aa2.7□□□□□ -1.98
ATXN3-238ENST00000556288 ACYP1P07311 99 aa2.7□□□□□ -1.98
ATXN3-238ENST00000556288 ANKRD29Q8N6D5 301 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms