RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SPINK1P00995 79 aa3.74□□□□□ -1.81
ATXN3-236ENST00000556220 LGALS3P17931 250 aaKnown RBP3.74□□□□□ -1.81
ATXN3-236ENST00000556220 CKS1BP61024 79 aa3.74□□□□□ -1.81
ATXN3-236ENST00000556220 RPL24P83731 157 aaKnown RBP3.74□□□□□ -1.81
ATXN3-236ENST00000556220 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
ATXN3-236ENST00000556220 SMIM29Q86T20 159 aa3.74□□□□□ -1.81
ATXN3-236ENST00000556220 LINC00308Q8TCZ7 52 aa3.74□□□□□ -1.81
ATXN3-236ENST00000556220 SPANXDQ9BXN6 97 aa3.74□□□□□ -1.81
ATXN3-236ENST00000556220 SPANXCQ9NY87 97 aa3.74□□□□□ -1.81
ATXN3-236ENST00000556220 TOMM7Q9P0U1 55 aa3.74□□□□□ -1.81
ATXN3-236ENST00000556220 HSBP1L1C9JCN9 74 aa3.73□□□□□ -1.81
ATXN3-236ENST00000556220 TIMM17BO60830 172 aa3.73□□□□□ -1.81
ATXN3-236ENST00000556220 HERV-K104P63124 156 aa3.73□□□□□ -1.81
ATXN3-236ENST00000556220 PRLHP81277 87 aa3.73□□□□□ -1.81
ATXN3-236ENST00000556220 BATFQ16520 125 aa3.73□□□□□ -1.81
ATXN3-236ENST00000556220 PCOTHQ58A44 107 aa3.73□□□□□ -1.81
ATXN3-236ENST00000556220 C6orf226Q5I0X4 101 aa3.73□□□□□ -1.81
ATXN3-236ENST00000556220 MIR7-3HGQ8N6C7 128 aa3.73□□□□□ -1.81
ATXN3-236ENST00000556220 Q8NBF4 154 aa3.73□□□□□ -1.81
ATXN3-236ENST00000556220 ERG28Q9UKR5 140 aa3.73□□□□□ -1.81
ATXN3-236ENST00000556220 LOC107984156A0A0G2JMH3 177 aa3.72□□□□□ -1.81
ATXN3-236ENST00000556220 H3BRM9 83 aa3.72□□□□□ -1.81
ATXN3-236ENST00000556220 M0R143 59 aa3.72□□□□□ -1.81
ATXN3-236ENST00000556220 HERVK_113P61574 105 aa3.72□□□□□ -1.81
ATXN3-236ENST00000556220 FAM19A1Q7Z5A9 133 aa3.72□□□□□ -1.81
ATXN3-236ENST00000556220 ARL17AQ8IVW1 177 aa3.72□□□□□ -1.81
ATXN3-236ENST00000556220 SND1-IT1Q9HBX3 110 aa3.72□□□□□ -1.81
ATXN3-236ENST00000556220 KRTAP4-16G5E9R7 235 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-236ENST00000556220 PFN2P35080 140 aa3.71□□□□□ -1.82
ATXN3-236ENST00000556220 SEC11AP67812 179 aa3.71□□□□□ -1.82
ATXN3-236ENST00000556220 TAL2Q16559 108 aa3.71□□□□□ -1.82
ATXN3-236ENST00000556220 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
ATXN3-236ENST00000556220 Q8N377 158 aa3.7□□□□□ -1.82
ATXN3-236ENST00000556220 NKAPP1Q8N9T2 125 aa3.7□□□□□ -1.82
ATXN3-236ENST00000556220 SPRR4Q96PI1 79 aa3.7□□□□□ -1.82
ATXN3-236ENST00000556220 HIST1H4GQ99525 98 aa3.7□□□□□ -1.82
ATXN3-236ENST00000556220 NHP2Q9NX24 153 aaKnown RBP3.7□□□□□ -1.82
ATXN3-236ENST00000556220 IGLV9-49A0A0B4J1Y8 123 aa3.69□□□□□ -1.82
ATXN3-236ENST00000556220 TMEM238C9JI98 176 aa3.69□□□□□ -1.82
ATXN3-236ENST00000556220 SLC25A20O43772 301 aa3.69□□□□□ -1.82
ATXN3-236ENST00000556220 RPS29P62273 56 aaKnown RBP3.69□□□□□ -1.82
ATXN3-236ENST00000556220 COX6B2Q6YFQ2 88 aa3.69□□□□□ -1.82
ATXN3-236ENST00000556220 RAB37Q96AX2 223 aa3.69□□□□□ -1.82
ATXN3-236ENST00000556220 FAM218AQ96MZ4 157 aa3.69□□□□□ -1.82
ATXN3-236ENST00000556220 TMEM126AQ9H061 195 aa3.69□□□□□ -1.82
ATXN3-236ENST00000556220 M0R378 163 aa3.68□□□□□ -1.82
ATXN3-236ENST00000556220 SFTA2Q6UW10 78 aa3.68□□□□□ -1.82
ATXN3-236ENST00000556220 SCGB1D4Q6XE38 83 aa3.68□□□□□ -1.82
ATXN3-236ENST00000556220 HIGD2AQ9BW72 106 aa3.68□□□□□ -1.82
ATXN3-236ENST00000556220 PRO0461Q9UI25 63 aa3.68□□□□□ -1.82
ATXN3-236ENST00000556220 NEBP20929 6669 aa3.67□□□□□ -1.82
ATXN3-236ENST00000556220 A0A0B4J2C4 111 aa3.67□□□□□ -1.82
ATXN3-236ENST00000556220 CXCL5P42830 114 aa3.67□□□□□ -1.82
ATXN3-236ENST00000556220 LINC00158P58513 81 aa3.67□□□□□ -1.82
ATXN3-236ENST00000556220 H3BUT2 72 aa3.66□□□□□ -1.82
ATXN3-236ENST00000556220 MEIG1Q5JSS6 88 aa3.66□□□□□ -1.82
ATXN3-236ENST00000556220 COL5A1-AS1Q5SY13 56 aa3.66□□□□□ -1.82
ATXN3-236ENST00000556220 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
ATXN3-236ENST00000556220 ZNF706Q9Y5V0 76 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-236ENST00000556220 NCR3O14931 201 aa3.65□□□□□ -1.83
ATXN3-236ENST00000556220 IGLV6-57P01721 117 aa3.65□□□□□ -1.83
ATXN3-236ENST00000556220 SSBP3-AS1Q7Z2R9 100 aa3.65□□□□□ -1.83
ATXN3-236ENST00000556220 MTURNQ8N3F0 131 aa3.65□□□□□ -1.83
ATXN3-236ENST00000556220 CLEC2BQ92478 149 aa3.65□□□□□ -1.83
ATXN3-236ENST00000556220 TRBV10-3A0A0K0K1G6 114 aa3.64□□□□□ -1.83
ATXN3-236ENST00000556220 A0A1W2PPM0 123 aa3.64□□□□□ -1.83
ATXN3-236ENST00000556220 TCL1BO95988 128 aa3.64□□□□□ -1.83
ATXN3-236ENST00000556220 IFITM1P13164 125 aa3.64□□□□□ -1.83
ATXN3-236ENST00000556220 SMIM11BQ8TCY0 68 aa3.64□□□□□ -1.83
ATXN3-236ENST00000556220 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
ATXN3-236ENST00000556220 H7C2G1 150 aa3.63□□□□□ -1.83
ATXN3-236ENST00000556220 COX17Q14061 63 aa3.63□□□□□ -1.83
ATXN3-236ENST00000556220 LINC00483Q53H64 154 aa3.63□□□□□ -1.83
ATXN3-236ENST00000556220 Q6ZVQ6 151 aa3.63□□□□□ -1.83
ATXN3-236ENST00000556220 PRO1854Q9UHT4 67 aa3.63□□□□□ -1.83
ATXN3-236ENST00000556220 C9orf92A6NGG3 77 aa3.62□□□□□ -1.83
ATXN3-236ENST00000556220 K7EP34 96 aa3.62□□□□□ -1.83
ATXN3-236ENST00000556220 NDUFC2O95298 119 aa3.62□□□□□ -1.83
ATXN3-236ENST00000556220 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
ATXN3-236ENST00000556220 MOBPQ13875 183 aa3.62□□□□□ -1.83
ATXN3-236ENST00000556220 SMCR5Q8TEV8 140 aa3.62□□□□□ -1.83
ATXN3-236ENST00000556220 SPRR1AP35321 89 aa3.61□□□□□ -1.83
ATXN3-236ENST00000556220 A6NDN8 102 aa3.6□□□□□ -1.83
ATXN3-236ENST00000556220 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
ATXN3-236ENST00000556220 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
ATXN3-236ENST00000556220 Q9BRP9 147 aa3.6□□□□□ -1.83
ATXN3-236ENST00000556220 H3BMG7 143 aa3.59□□□□□ -1.83
ATXN3-236ENST00000556220 TRBV10-2A0A0K0K1G8 114 aa3.58□□□□□ -1.84
ATXN3-236ENST00000556220 LST1O00453 97 aa3.58□□□□□ -1.84
ATXN3-236ENST00000556220 LINC00846Q9NV44 126 aa3.58□□□□□ -1.84
ATXN3-236ENST00000556220 SPCS1Q9Y6A9 102 aa3.58□□□□□ -1.84
ATXN3-236ENST00000556220 RPL37P61927 97 aaKnown RBP3.57□□□□□ -1.84
ATXN3-236ENST00000556220 C6orf99Q4VX62 202 aa3.57□□□□□ -1.84
ATXN3-236ENST00000556220 Q6Q795 121 aa3.57□□□□□ -1.84
ATXN3-236ENST00000556220 KCNQ1DNQ9H478 68 aa3.57□□□□□ -1.84
ATXN3-236ENST00000556220 TRAV13-2A0A0B4J235 113 aa3.55□□□□□ -1.84
ATXN3-236ENST00000556220 PSMB2P49721 201 aa3.55□□□□□ -1.84
ATXN3-236ENST00000556220 ELOF1P60002 83 aaKnown RBP3.55□□□□□ -1.84
ATXN3-236ENST00000556220 VAMP3Q15836 100 aa3.55□□□□□ -1.84
ATXN3-236ENST00000556220 LINC00575Q6W349 94 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms