RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 IMUPQ9GZP8 106 aa9.08□□□□□ -0.96
VPS33B-205ENST00000556096 SMIM29Q86T20 159 aa9.08□□□□□ -0.96
VPS33B-205ENST00000556096 C3orf22Q8N5N4 141 aa9.08□□□□□ -0.96
VPS33B-205ENST00000556096 DYNC1H1Q14204 4646 aaKnown RBP9.07□□□□□ -0.96
VPS33B-205ENST00000556096 Q6JHZ5 121 aa9.07□□□□□ -0.96
VPS33B-205ENST00000556096 UBL5Q9BZL1 73 aa9.07□□□□□ -0.96
VPS33B-205ENST00000556096 SPRR1BP22528 89 aa9.06□□□□□ -0.96
VPS33B-205ENST00000556096 PSORS1C2Q9UIG4 136 aa9.04□□□□□ -0.96
VPS33B-205ENST00000556096 A0A1B0GW54 56 aa9.03□□□□□ -0.96
VPS33B-205ENST00000556096 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
VPS33B-205ENST00000556096 LRP1BQ9NZR2 4599 aa9.03□□□□□ -0.96
VPS33B-205ENST00000556096 IGLV8-61A0A075B6I0 122 aa9.02□□□□□ -0.96
VPS33B-205ENST00000556096 F8WEM9 126 aa9.02□□□□□ -0.96
VPS33B-205ENST00000556096 ATP5EP2Q5VTU8 51 aa9.02□□□□□ -0.96
VPS33B-205ENST00000556096 Q6ZSA8 131 aa9.02□□□□□ -0.97
VPS33B-205ENST00000556096 FAM30AQ9NZY2 134 aa9.02□□□□□ -0.97
VPS33B-205ENST00000556096 DNAH8Q96JB1 4490 aa9□□□□□ -0.97
VPS33B-205ENST00000556096 Q6ZVQ6 151 aa9□□□□□ -0.97
VPS33B-205ENST00000556096 KRTAP10-1P60331 282 aa9□□□□□ -0.97
VPS33B-205ENST00000556096 CIRBP-AS1Q8TBR5 109 aa9□□□□□ -0.97
VPS33B-205ENST00000556096 IGKV3D-7A0A0C4DH55 119 aa8.99□□□□□ -0.97
VPS33B-205ENST00000556096 A0A1W2PNM2 257 aa8.99□□□□□ -0.97
VPS33B-205ENST00000556096 Q8NBF4 154 aa8.99□□□□□ -0.97
VPS33B-205ENST00000556096 ZNF861PO60384 105 aa8.97□□□□□ -0.97
VPS33B-205ENST00000556096 SPRR4Q96PI1 79 aa8.97□□□□□ -0.97
VPS33B-205ENST00000556096 ZNF706Q9Y5V0 76 aaPredicted RBP8.96□□□□□ -0.98
VPS33B-205ENST00000556096 IGFL1Q6UW32 110 aa8.95□□□□□ -0.98
VPS33B-205ENST00000556096 SCXQ7RTU7 201 aa8.95□□□□□ -0.98
VPS33B-205ENST00000556096 HAMPP81172 84 aa8.94□□□□□ -0.98
VPS33B-205ENST00000556096 LINC00483Q53H64 154 aa8.94□□□□□ -0.98
VPS33B-205ENST00000556096 IGLV7-43P04211 117 aa8.94□□□□□ -0.98
VPS33B-205ENST00000556096 CRYGAP11844 174 aa8.94□□□□□ -0.98
VPS33B-205ENST00000556096 CXCL6P80162 114 aa8.94□□□□□ -0.98
VPS33B-205ENST00000556096 APOBP04114 4563 aaKnown RBP8.93□□□□□ -0.98
VPS33B-205ENST00000556096 NREPQ16612 68 aa8.93□□□□□ -0.98
VPS33B-205ENST00000556096 FAM236AA0A1B0GUQ0 79 aa8.9□□□□□ -0.98
VPS33B-205ENST00000556096 FAM236BA0A1B0GV22 79 aa8.9□□□□□ -0.98
VPS33B-205ENST00000556096 KIAA1109Q2LD37 5005 aa8.9□□□□□ -0.99
VPS33B-205ENST00000556096 HIST1H4AP62805 103 aaKnown RBP8.88□□□□□ -0.99
VPS33B-205ENST00000556096 A0A0G2JQZ4 141 aa8.88□□□□□ -0.99
VPS33B-205ENST00000556096 ANAPC13Q9BS18 74 aa8.88□□□□□ -0.99
VPS33B-205ENST00000556096 RPL37AP61513 92 aaKnown RBP8.87□□□□□ -0.99
VPS33B-205ENST00000556096 A0A087WVE0 104 aa8.86□□□□□ -0.99
VPS33B-205ENST00000556096 RYR1P21817 5038 aa8.86□□□□□ -0.99
VPS33B-205ENST00000556096 SRRM2Q9UQ35 2752 aaKnown RBP8.84□□□□□ -0.99
VPS33B-205ENST00000556096 BPY2O14599 106 aa8.84□□□□□ -0.99
VPS33B-205ENST00000556096 HSPG2P98160 4391 aa8.83□□□□□ -1
VPS33B-205ENST00000556096 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
VPS33B-205ENST00000556096 C9orf153Q5TBE3 101 aa8.82□□□□□ -1
VPS33B-205ENST00000556096 A0A087WSZ3 146 aa8.81□□□□□ -1
VPS33B-205ENST00000556096 ATOX1O00244 68 aa8.8□□□□□ -1
VPS33B-205ENST00000556096 SMR3BP02814 79 aaPredicted RBP8.79□□□□□ -1
VPS33B-205ENST00000556096 ANAPC11Q9NYG5 84 aa8.79□□□□□ -1
VPS33B-205ENST00000556096 KRTAP17-1Q9BYP8 105 aa8.78□□□□□ -1
VPS33B-205ENST00000556096 IGKV4-1P06312 121 aa8.77□□□□□ -1
VPS33B-205ENST00000556096 MOBPQ13875 183 aa8.77□□□□□ -1
VPS33B-205ENST00000556096 FAT1Q14517 4588 aa8.77□□□□□ -1.01
VPS33B-205ENST00000556096 CDK2AP2O75956 126 aa8.77□□□□□ -1.01
VPS33B-205ENST00000556096 HERC2O95714 4834 aa8.76□□□□□ -1.01
VPS33B-205ENST00000556096 DSCR10P59022 87 aa8.74□□□□□ -1.01
VPS33B-205ENST00000556096 Q8N9L7 120 aa8.74□□□□□ -1.01
VPS33B-205ENST00000556096 SSBP3-AS1Q7Z2R9 100 aa8.72□□□□□ -1.01
VPS33B-205ENST00000556096 LINC00472Q9H8W2 130 aa8.72□□□□□ -1.01
VPS33B-205ENST00000556096 FAM229BQ4G0N7 80 aa8.71□□□□□ -1.01
VPS33B-205ENST00000556096 VPS13BQ7Z7G8 4022 aa8.7□□□□□ -1.02
VPS33B-205ENST00000556096 COX7CP15954 63 aa8.69□□□□□ -1.02
VPS33B-205ENST00000556096 SERP2Q8N6R1 65 aa8.69□□□□□ -1.02
VPS33B-205ENST00000556096 SS18L2Q9UHA2 77 aa8.69□□□□□ -1.02
VPS33B-205ENST00000556096 CCDC179H3BU77 68 aa8.68□□□□□ -1.02
VPS33B-205ENST00000556096 CD164Q04900 197 aa8.68□□□□□ -1.02
VPS33B-205ENST00000556096 K7EQZ3 153 aa8.68□□□□□ -1.02
VPS33B-205ENST00000556096 UQCRQO14949 82 aa8.68□□□□□ -1.02
VPS33B-205ENST00000556096 DEFB116Q30KQ4 102 aa8.68□□□□□ -1.02
VPS33B-205ENST00000556096 HRCT1Q6UXD1 115 aa8.68□□□□□ -1.02
VPS33B-205ENST00000556096 SMIM20Q8N5G0 67 aa8.68□□□□□ -1.02
VPS33B-205ENST00000556096 J3KT08 172 aa8.67□□□□□ -1.02
VPS33B-205ENST00000556096 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
VPS33B-205ENST00000556096 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
VPS33B-205ENST00000556096 A0A087X002 238 aa8.66□□□□□ -1.02
VPS33B-205ENST00000556096 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
VPS33B-205ENST00000556096 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.03
VPS33B-205ENST00000556096 Q5VSD8 79 aa8.65□□□□□ -1.03
VPS33B-205ENST00000556096 Q8N1X5 172 aa8.65□□□□□ -1.03
VPS33B-205ENST00000556096 TRAV7A0A075B6U4 112 aa8.64□□□□□ -1.03
VPS33B-205ENST00000556096 Q96NJ1 140 aa8.64□□□□□ -1.03
VPS33B-205ENST00000556096 A8MWP4 228 aa8.63□□□□□ -1.03
VPS33B-205ENST00000556096 PRR15Q8IV56 129 aa8.62□□□□□ -1.03
VPS33B-205ENST00000556096 FAM229AH3BQW9 127 aa8.61□□□□□ -1.03
VPS33B-205ENST00000556096 ABCA13Q86UQ4 5058 aa8.61□□□□□ -1.03
VPS33B-205ENST00000556096 HCG22E2RYF7 251 aa8.6□□□□□ -1.03
VPS33B-205ENST00000556096 PLA2G1BP04054 148 aaKnown RBP8.6□□□□□ -1.03
VPS33B-205ENST00000556096 KRTAP10-4P60372 401 aaPredicted RBP8.6□□□□□ -1.03
VPS33B-205ENST00000556096 PCLOQ9Y6V0 5065 aa8.59□□□□□ -1.03
VPS33B-205ENST00000556096 ASB16-AS1Q495Z4 193 aa8.58□□□□□ -1.04
VPS33B-205ENST00000556096 NDUFB1O75438 58 aa8.57□□□□□ -1.04
VPS33B-205ENST00000556096 OCR1Q9BZK8 76 aa8.57□□□□□ -1.04
VPS33B-205ENST00000556096 Q5XG85 94 aa8.56□□□□□ -1.04
VPS33B-205ENST00000556096 KRTAP29-1A8MX34 341 aaPredicted RBP8.54□□□□□ -1.04
VPS33B-205ENST00000556096 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
VPS33B-205ENST00000556096 PKHD1L1Q86WI1 4243 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms