RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TRBV7-7A0A0K0K1E9 115 aa7.36□□□□□ -1.23
CHMP4BP1-201ENST00000556017 IGFL1Q6UW32 110 aa7.36□□□□□ -1.23
CHMP4BP1-201ENST00000556017 Q6Q795 121 aa7.35□□□□□ -1.23
CHMP4BP1-201ENST00000556017 Q6ZVH6 145 aa7.35□□□□□ -1.23
CHMP4BP1-201ENST00000556017 LINC00575Q6W349 94 aa7.34□□□□□ -1.23
CHMP4BP1-201ENST00000556017 NHP2Q9NX24 153 aaKnown RBP7.34□□□□□ -1.23
CHMP4BP1-201ENST00000556017 COA6Q5JTJ3 125 aaKnown RBP7.33□□□□□ -1.24
CHMP4BP1-201ENST00000556017 ATOH7Q8N100 152 aa7.33□□□□□ -1.24
CHMP4BP1-201ENST00000556017 CLEC2BQ92478 149 aa7.33□□□□□ -1.24
CHMP4BP1-201ENST00000556017 TRAV13-2A0A0B4J235 113 aa7.32□□□□□ -1.24
CHMP4BP1-201ENST00000556017 KRTDAPP60985 99 aa7.32□□□□□ -1.24
CHMP4BP1-201ENST00000556017 Q6ZQY7 126 aa7.32□□□□□ -1.24
CHMP4BP1-201ENST00000556017 COPS9Q8WXC6 57 aa7.32□□□□□ -1.24
CHMP4BP1-201ENST00000556017 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
CHMP4BP1-201ENST00000556017 Q6JHZ5 121 aa7.31□□□□□ -1.24
CHMP4BP1-201ENST00000556017 ATP11AUNQ6ZP68 121 aa7.31□□□□□ -1.24
CHMP4BP1-201ENST00000556017 CFC1P0CG37 223 aa7.3□□□□□ -1.24
CHMP4BP1-201ENST00000556017 OCIAD2Q56VL3 154 aa7.3□□□□□ -1.24
CHMP4BP1-201ENST00000556017 F8WEM9 126 aa7.29□□□□□ -1.24
CHMP4BP1-201ENST00000556017 MT2AP02795 61 aa7.29□□□□□ -1.24
CHMP4BP1-201ENST00000556017 C20orf166-AS1Q96NR2 134 aa7.29□□□□□ -1.24
CHMP4BP1-201ENST00000556017 hADV29S1A0JD25 119 aa7.27□□□□□ -1.25
CHMP4BP1-201ENST00000556017 A8MUU9 505 aa7.27□□□□□ -1.25
CHMP4BP1-201ENST00000556017 LCE2BO14633 110 aa7.27□□□□□ -1.25
CHMP4BP1-201ENST00000556017 Q96NJ1 140 aa7.26□□□□□ -1.25
CHMP4BP1-201ENST00000556017 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
CHMP4BP1-201ENST00000556017 C20orf202A1L168 122 aa7.24□□□□□ -1.25
CHMP4BP1-201ENST00000556017 H3BUT2 72 aa7.24□□□□□ -1.25
CHMP4BP1-201ENST00000556017 MT1FP04733 61 aa7.23□□□□□ -1.25
CHMP4BP1-201ENST00000556017 LST1O00453 97 aa7.22□□□□□ -1.25
CHMP4BP1-201ENST00000556017 VAMP3Q15836 100 aa7.22□□□□□ -1.25
CHMP4BP1-201ENST00000556017 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.22□□□□□ -1.25
CHMP4BP1-201ENST00000556017 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
CHMP4BP1-201ENST00000556017 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
CHMP4BP1-201ENST00000556017 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
CHMP4BP1-201ENST00000556017 MPLKIPQ8TAP9 179 aa7.19□□□□□ -1.26
CHMP4BP1-201ENST00000556017 SNRPEP62304 92 aaKnown RBP7.15□□□□□ -1.26
CHMP4BP1-201ENST00000556017 C12orf57Q99622 126 aa7.15□□□□□ -1.26
CHMP4BP1-201ENST00000556017 SNHG12Q9BXW3 62 aa7.15□□□□□ -1.26
CHMP4BP1-201ENST00000556017 DSCR10P59022 87 aa7.14□□□□□ -1.27
CHMP4BP1-201ENST00000556017 TRBV20-1A0A075B6N2 111 aa7.13□□□□□ -1.27
CHMP4BP1-201ENST00000556017 HRES1P13985 223 aa7.13□□□□□ -1.27
CHMP4BP1-201ENST00000556017 BVES-AS1Q5T3Y7 98 aa7.13□□□□□ -1.27
CHMP4BP1-201ENST00000556017 TEN1Q86WV5 123 aa7.13□□□□□ -1.27
CHMP4BP1-201ENST00000556017 SS18L2Q9UHA2 77 aa7.13□□□□□ -1.27
CHMP4BP1-201ENST00000556017 A0A087WSZ3 146 aa7.12□□□□□ -1.27
CHMP4BP1-201ENST00000556017 SCGB1D1O95968 90 aa7.12□□□□□ -1.27
CHMP4BP1-201ENST00000556017 FAM218AQ96MZ4 157 aa7.12□□□□□ -1.27
CHMP4BP1-201ENST00000556017 NDUFV3P56181 108 aaKnown RBP7.1□□□□□ -1.27
CHMP4BP1-201ENST00000556017 HIST1H2BLQ99880 126 aa7.1□□□□□ -1.27
CHMP4BP1-201ENST00000556017 NOTCH2NLQ7Z3S9 236 aa7.09□□□□□ -1.27
CHMP4BP1-201ENST00000556017 HIST3H2BBQ8N257 126 aa7.09□□□□□ -1.27
CHMP4BP1-201ENST00000556017 A0A1W2PNM2 257 aa7.08□□□□□ -1.28
CHMP4BP1-201ENST00000556017 KRTAP10-10P60014 251 aa7.08□□□□□ -1.28
CHMP4BP1-201ENST00000556017 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
CHMP4BP1-201ENST00000556017 HIST1H4GQ99525 98 aa7.05□□□□□ -1.28
CHMP4BP1-201ENST00000556017 H3BMG7 143 aa7.04□□□□□ -1.28
CHMP4BP1-201ENST00000556017 FAM236DA0A1B0GTK5 79 aa7.03□□□□□ -1.28
CHMP4BP1-201ENST00000556017 FAM236CP0DP71 79 aa7.03□□□□□ -1.28
CHMP4BP1-201ENST00000556017 LINC00313P59037 77 aa7.03□□□□□ -1.28
CHMP4BP1-201ENST00000556017 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
CHMP4BP1-201ENST00000556017 SIGMAR1Q99720 223 aa7.02□□□□□ -1.29
CHMP4BP1-201ENST00000556017 HSBP1L1C9JCN9 74 aa7.01□□□□□ -1.29
CHMP4BP1-201ENST00000556017 COX8AP10176 69 aa7.01□□□□□ -1.29
CHMP4BP1-201ENST00000556017 H0YGX0 51 aa7□□□□□ -1.29
CHMP4BP1-201ENST00000556017 SYNE2Q8WXH0 6885 aaKnown RBP7□□□□□ -1.29
CHMP4BP1-201ENST00000556017 DLEU1O43261 78 aa6.99□□□□□ -1.29
CHMP4BP1-201ENST00000556017 LINC00472Q9H8W2 130 aa6.99□□□□□ -1.29
CHMP4BP1-201ENST00000556017 A0A0B4J2C4 111 aa6.98□□□□□ -1.29
CHMP4BP1-201ENST00000556017 IGKV4-1P06312 121 aa6.98□□□□□ -1.29
CHMP4BP1-201ENST00000556017 RBM12B-AS1Q9P1G2 102 aa6.98□□□□□ -1.29
CHMP4BP1-201ENST00000556017 FABP2P12104 132 aa6.96□□□□□ -1.3
CHMP4BP1-201ENST00000556017 DEFB116Q30KQ4 102 aa6.96□□□□□ -1.3
CHMP4BP1-201ENST00000556017 C2orf91Q6ZV80 131 aa6.96□□□□□ -1.3
CHMP4BP1-201ENST00000556017 TRBV7-4A0A0J9YYF1 115 aa6.95□□□□□ -1.3
CHMP4BP1-201ENST00000556017 A0A1B0GX51 115 aa6.95□□□□□ -1.3
CHMP4BP1-201ENST00000556017 S100A2P29034 98 aa6.95□□□□□ -1.3
CHMP4BP1-201ENST00000556017 RAB37Q96AX2 223 aa6.95□□□□□ -1.3
CHMP4BP1-201ENST00000556017 SMCPP49901 116 aaPredicted RBP6.94□□□□□ -1.3
CHMP4BP1-201ENST00000556017 HIGD1BQ9P298 99 aa6.94□□□□□ -1.3
CHMP4BP1-201ENST00000556017 C14orf144Q96I85 54 aa6.93□□□□□ -1.3
CHMP4BP1-201ENST00000556017 TRIAP1O43715 76 aa6.91□□□□□ -1.3
CHMP4BP1-201ENST00000556017 SNCGO76070 127 aa6.91□□□□□ -1.3
CHMP4BP1-201ENST00000556017 IGHV6-1A0A0B4J1U7 121 aa6.9□□□□□ -1.3
CHMP4BP1-201ENST00000556017 A0A1B0GV72 72 aa6.89□□□□□ -1.31
CHMP4BP1-201ENST00000556017 ANKRD29Q8N6D5 301 aa6.89□□□□□ -1.31
CHMP4BP1-201ENST00000556017 PRO1854Q9UHT4 67 aa6.89□□□□□ -1.31
CHMP4BP1-201ENST00000556017 FXYD2P54710 66 aa6.88□□□□□ -1.31
CHMP4BP1-201ENST00000556017 SPINK7P58062 85 aa6.87□□□□□ -1.31
CHMP4BP1-201ENST00000556017 CEND1Q8N111 149 aa6.87□□□□□ -1.31
CHMP4BP1-201ENST00000556017 GHRHP01286 108 aa6.86□□□□□ -1.31
CHMP4BP1-201ENST00000556017 A0A1B0GVX0 72 aa6.85□□□□□ -1.31
CHMP4BP1-201ENST00000556017 CCKP06307 115 aa6.85□□□□□ -1.31
CHMP4BP1-201ENST00000556017 KRTAP6-3Q3LI67 103 aa6.85□□□□□ -1.31
CHMP4BP1-201ENST00000556017 ZCCHC13Q8WW36 166 aaKnown RBP6.85□□□□□ -1.31
CHMP4BP1-201ENST00000556017 PAM16Q9Y3D7 125 aa6.85□□□□□ -1.31
CHMP4BP1-201ENST00000556017 C8orf87E5RJ46 101 aa6.83□□□□□ -1.32
CHMP4BP1-201ENST00000556017 SPATA45Q537H7 98 aa6.83□□□□□ -1.32
CHMP4BP1-201ENST00000556017 ORMDL1Q9P0S3 153 aa6.83□□□□□ -1.32
CHMP4BP1-201ENST00000556017 TRACP01848 142 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms