RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 K7EQZ3 153 aa10.18□□□□□ -0.78
TUBB3-209ENST00000555609 PSCAO43653 123 aa10.18□□□□□ -0.78
TUBB3-209ENST00000555609 SPRR1BP22528 89 aa10.18□□□□□ -0.78
TUBB3-209ENST00000555609 FP248Q71RG6 208 aaPredicted RBP10.17□□□□□ -0.78
TUBB3-209ENST00000555609 ZCCHC13Q8WW36 166 aaKnown RBP10.16□□□□□ -0.78
TUBB3-209ENST00000555609 IGKV2-24A0A0C4DH68 120 aa10.14□□□□□ -0.79
TUBB3-209ENST00000555609 UBE2AP49459 152 aa10.14□□□□□ -0.79
TUBB3-209ENST00000555609 PRLHP81277 87 aa10.13□□□□□ -0.79
TUBB3-209ENST00000555609 KRTAP1-5Q9BYS1 174 aa10.13□□□□□ -0.79
TUBB3-209ENST00000555609 UBE2DNLQ8IWF7 75 aa10.13□□□□□ -0.79
TUBB3-209ENST00000555609 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.12□□□□□ -0.79
TUBB3-209ENST00000555609 APLNQ9ULZ1 77 aa10.12□□□□□ -0.79
TUBB3-209ENST00000555609 LINC00474Q9P2X8 69 aa10.1□□□□□ -0.79
TUBB3-209ENST00000555609 A0A087WSZ3 146 aa10.1□□□□□ -0.79
TUBB3-209ENST00000555609 NDUFB1O75438 58 aa10.09□□□□□ -0.79
TUBB3-209ENST00000555609 HUWE1Q7Z6Z7 4374 aaKnown RBP10.09□□□□□ -0.79
TUBB3-209ENST00000555609 TGP01266 2768 aa10.09□□□□□ -0.79
TUBB3-209ENST00000555609 C9orf163Q8N9P6 203 aa10.08□□□□□ -0.8
TUBB3-209ENST00000555609 B9D2Q9BPU9 175 aa10.06□□□□□ -0.8
TUBB3-209ENST00000555609 V9GYY9 64 aa10.06□□□□□ -0.8
TUBB3-209ENST00000555609 H3BPC8 53 aa10.06□□□□□ -0.8
TUBB3-209ENST00000555609 PHF5AQ7RTV0 110 aaKnown RBP10.06□□□□□ -0.8
TUBB3-209ENST00000555609 CYP4F30PQ9H0H9 118 aa10.05□□□□□ -0.8
TUBB3-209ENST00000555609 DNAH9Q9NYC9 4486 aa10.04□□□□□ -0.8
TUBB3-209ENST00000555609 MP68P56378 58 aa10.04□□□□□ -0.8
TUBB3-209ENST00000555609 C1orf195Q5TG92 126 aa10.04□□□□□ -0.8
TUBB3-209ENST00000555609 hDV103S1A0JD37 113 aa10.04□□□□□ -0.8
TUBB3-209ENST00000555609 KRTAP29-1A8MX34 341 aaPredicted RBP10.04□□□□□ -0.8
TUBB3-209ENST00000555609 PRR15Q8IV56 129 aa10.03□□□□□ -0.8
TUBB3-209ENST00000555609 A0A0G2JQZ4 141 aa10.02□□□□□ -0.8
TUBB3-209ENST00000555609 LRCOL1A6NCL2 159 aa10.02□□□□□ -0.81
TUBB3-209ENST00000555609 A8MWP4 228 aa10.02□□□□□ -0.81
TUBB3-209ENST00000555609 LINC00472Q9H8W2 130 aa10.02□□□□□ -0.81
TUBB3-209ENST00000555609 COL7A1Q02388 2944 aa10.01□□□□□ -0.81
TUBB3-209ENST00000555609 FAM229BQ4G0N7 80 aa10.01□□□□□ -0.81
TUBB3-209ENST00000555609 KRTAP11-1Q8IUC1 163 aa10□□□□□ -0.81
TUBB3-209ENST00000555609 CHTF8P0CG12 524 aa10□□□□□ -0.81
TUBB3-209ENST00000555609 WFDC13Q8IUB5 93 aa10□□□□□ -0.81
TUBB3-209ENST00000555609 BRK1Q8WUW1 75 aa10□□□□□ -0.81
TUBB3-209ENST00000555609 DEFB116Q30KQ4 102 aa9.99□□□□□ -0.81
TUBB3-209ENST00000555609 NBDYA0A0U1RRE5 68 aa9.98□□□□□ -0.81
TUBB3-209ENST00000555609 CASC2Q6XLA1 102 aa9.98□□□□□ -0.81
TUBB3-209ENST00000555609 KRTAP13-1Q8IUC0 172 aa9.98□□□□□ -0.81
TUBB3-209ENST00000555609 RPL37AP61513 92 aaKnown RBP9.98□□□□□ -0.81
TUBB3-209ENST00000555609 C1orf64Q8NEQ6 169 aa9.97□□□□□ -0.81
TUBB3-209ENST00000555609 TRAV22A0A0B4J277 110 aa9.96□□□□□ -0.81
TUBB3-209ENST00000555609 NUPR2A6NF83 97 aa9.96□□□□□ -0.82
TUBB3-209ENST00000555609 SPANXA2-OT1Q8N9U9 137 aa9.95□□□□□ -0.82
TUBB3-209ENST00000555609 Q1T7F1 81 aa9.94□□□□□ -0.82
TUBB3-209ENST00000555609 SEC61GP60059 68 aa9.93□□□□□ -0.82
TUBB3-209ENST00000555609 Q6ZRN7 208 aaPredicted RBP9.93□□□□□ -0.82
TUBB3-209ENST00000555609 MPLKIPQ8TAP9 179 aa9.93□□□□□ -0.82
TUBB3-209ENST00000555609 DYNC2H1Q8NCM8 4307 aaKnown RBP9.92□□□□□ -0.82
TUBB3-209ENST00000555609 STAB2Q8WWQ8 2551 aa9.91□□□□□ -0.82
TUBB3-209ENST00000555609 H0Y9P7 68 aa9.91□□□□□ -0.82
TUBB3-209ENST00000555609 LINC00208Q96KT6 92 aa9.91□□□□□ -0.82
TUBB3-209ENST00000555609 LINC00483Q53H64 154 aa9.89□□□□□ -0.83
TUBB3-209ENST00000555609 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
TUBB3-209ENST00000555609 ZNF706Q9Y5V0 76 aaPredicted RBP9.89□□□□□ -0.83
TUBB3-209ENST00000555609 MMP24-AS1A0A0U1RRL7 71 aa9.86□□□□□ -0.83
TUBB3-209ENST00000555609 TP53AIP1Q9HCN2 124 aa9.85□□□□□ -0.83
TUBB3-209ENST00000555609 PANO1I0J062 215 aa9.85□□□□□ -0.83
TUBB3-209ENST00000555609 DNAH10Q8IVF4 4471 aa9.84□□□□□ -0.83
TUBB3-209ENST00000555609 MOBPQ13875 183 aa9.84□□□□□ -0.83
TUBB3-209ENST00000555609 ASB16-AS1Q495Z4 193 aa9.84□□□□□ -0.83
TUBB3-209ENST00000555609 Q96NJ1 140 aa9.81□□□□□ -0.84
TUBB3-209ENST00000555609 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.81□□□□□ -0.84
TUBB3-209ENST00000555609 A0A087WTM6 91 aa9.8□□□□□ -0.84
TUBB3-209ENST00000555609 PMAIP1Q13794 54 aa9.8□□□□□ -0.84
TUBB3-209ENST00000555609 DNAH7Q8WXX0 4024 aa9.78□□□□□ -0.84
TUBB3-209ENST00000555609 IGLV9-49A0A0B4J1Y8 123 aa9.78□□□□□ -0.84
TUBB3-209ENST00000555609 PRR4Q16378 134 aa9.78□□□□□ -0.84
TUBB3-209ENST00000555609 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
TUBB3-209ENST00000555609 IGLV5-52A0A0A0MRZ9 124 aa9.76□□□□□ -0.85
TUBB3-209ENST00000555609 C8orf17Q9NRJ1 99 aa9.76□□□□□ -0.85
TUBB3-209ENST00000555609 IGLV7-46A0A075B6I9 117 aa9.75□□□□□ -0.85
TUBB3-209ENST00000555609 WWC2-AS2Q96NR7 200 aa9.75□□□□□ -0.85
TUBB3-209ENST00000555609 ZNF861PO60384 105 aa9.74□□□□□ -0.85
TUBB3-209ENST00000555609 Q6ZR54 194 aa9.74□□□□□ -0.85
TUBB3-209ENST00000555609 CSMD3Q7Z407 3707 aa9.74□□□□□ -0.85
TUBB3-209ENST00000555609 A0A1B0GVX0 72 aa9.73□□□□□ -0.85
TUBB3-209ENST00000555609 RTL8CO15255 209 aa9.73□□□□□ -0.85
TUBB3-209ENST00000555609 CDK2AP2O75956 126 aa9.73□□□□□ -0.85
TUBB3-209ENST00000555609 PSORS1C2Q9UIG4 136 aa9.72□□□□□ -0.85
TUBB3-209ENST00000555609 LIMD2Q9BT23 127 aa9.71□□□□□ -0.85
TUBB3-209ENST00000555609 STARD9Q9P2P6 4700 aa9.71□□□□□ -0.86
TUBB3-209ENST00000555609 LYSTQ99698 3801 aa9.7□□□□□ -0.86
TUBB3-209ENST00000555609 CD164Q04900 197 aa9.68□□□□□ -0.86
TUBB3-209ENST00000555609 MRPL34Q9BQ48 92 aaKnown RBP9.68□□□□□ -0.86
TUBB3-209ENST00000555609 PLECQ15149 4684 aaKnown RBP9.67□□□□□ -0.86
TUBB3-209ENST00000555609 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
TUBB3-209ENST00000555609 IGHV6-1A0A0B4J1U7 121 aa9.65□□□□□ -0.86
TUBB3-209ENST00000555609 PSPHP1O15172 72 aa9.65□□□□□ -0.86
TUBB3-209ENST00000555609 TENM2Q9NT68 2774 aa9.64□□□□□ -0.87
TUBB3-209ENST00000555609 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
TUBB3-209ENST00000555609 COA5Q86WW8 74 aa9.63□□□□□ -0.87
TUBB3-209ENST00000555609 A8MUN3 132 aa9.62□□□□□ -0.87
TUBB3-209ENST00000555609 NDUFS5O43920 106 aa9.6□□□□□ -0.87
TUBB3-209ENST00000555609 IGLV7-43P04211 117 aa9.6□□□□□ -0.87
TUBB3-209ENST00000555609 Q5VV11 94 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms