RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 Q5VSD8 79 aa6.17□□□□□ -1.42
NEK9-205ENST00000555405 PCP4P48539 62 aa6.16□□□□□ -1.42
NEK9-205ENST00000555405 OCIAD2Q56VL3 154 aa6.16□□□□□ -1.42
NEK9-205ENST00000555405 KRTAP13-1Q8IUC0 172 aa6.16□□□□□ -1.42
NEK9-205ENST00000555405 SPRR4Q96PI1 79 aa6.16□□□□□ -1.42
NEK9-205ENST00000555405 PLA2G1BP04054 148 aaKnown RBP6.15□□□□□ -1.42
NEK9-205ENST00000555405 LINC01547P58512 204 aaPredicted RBP6.15□□□□□ -1.42
NEK9-205ENST00000555405 MOBPQ13875 183 aa6.15□□□□□ -1.42
NEK9-205ENST00000555405 H0Y9J4 135 aa6.15□□□□□ -1.43
NEK9-205ENST00000555405 PPDPFLQ8WWR9 84 aa6.15□□□□□ -1.43
NEK9-205ENST00000555405 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.43
NEK9-205ENST00000555405 ZNF706Q9Y5V0 76 aaPredicted RBP6.14□□□□□ -1.43
NEK9-205ENST00000555405 VPS13BQ7Z7G8 4022 aa6.13□□□□□ -1.43
NEK9-205ENST00000555405 CCKP06307 115 aa6.13□□□□□ -1.43
NEK9-205ENST00000555405 JMJD7-PLA2G4BH0Y9G9 81 aa6.12□□□□□ -1.43
NEK9-205ENST00000555405 SMIM29Q86T20 159 aa6.12□□□□□ -1.43
NEK9-205ENST00000555405 IGLV5-48A0A075B6I7 105 aa6.11□□□□□ -1.43
NEK9-205ENST00000555405 PRR26Q8N8Z3 221 aa6.11□□□□□ -1.43
NEK9-205ENST00000555405 J3QR89 54 aa6.1□□□□□ -1.43
NEK9-205ENST00000555405 CDK2AP2O75956 126 aa6.1□□□□□ -1.43
NEK9-205ENST00000555405 A0A087X002 238 aa6.1□□□□□ -1.43
NEK9-205ENST00000555405 K7ERU9 68 aa6.09□□□□□ -1.43
NEK9-205ENST00000555405 CRYGAP11844 174 aa6.09□□□□□ -1.44
NEK9-205ENST00000555405 H3BQ85 93 aa6.08□□□□□ -1.44
NEK9-205ENST00000555405 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
NEK9-205ENST00000555405 IGFL1Q6UW32 110 aa6.08□□□□□ -1.44
NEK9-205ENST00000555405 SPINK6Q6UWN8 80 aa6.08□□□□□ -1.44
NEK9-205ENST00000555405 TYMSOSQ8TAI1 123 aa6.07□□□□□ -1.44
NEK9-205ENST00000555405 DEFB116Q30KQ4 102 aa6.06□□□□□ -1.44
NEK9-205ENST00000555405 RYR1P21817 5038 aa6.06□□□□□ -1.44
NEK9-205ENST00000555405 A0A087WSZ3 146 aa6.06□□□□□ -1.44
NEK9-205ENST00000555405 Q6ZQT0 140 aa6.05□□□□□ -1.44
NEK9-205ENST00000555405 C4orf48Q5BLP8 95 aa6.04□□□□□ -1.44
NEK9-205ENST00000555405 Q8N1X5 172 aa6.04□□□□□ -1.44
NEK9-205ENST00000555405 Q8NBF4 154 aa6.04□□□□□ -1.44
NEK9-205ENST00000555405 HSPG2P98160 4391 aa6.04□□□□□ -1.44
NEK9-205ENST00000555405 A0A1W2PNM2 257 aa6.04□□□□□ -1.44
NEK9-205ENST00000555405 KRTAP4-5Q9BYR2 181 aa6.04□□□□□ -1.44
NEK9-205ENST00000555405 SPRR1BP22528 89 aa6.03□□□□□ -1.44
NEK9-205ENST00000555405 KRTAP13-2Q52LG2 175 aa6.03□□□□□ -1.44
NEK9-205ENST00000555405 LINC00846Q9NV44 126 aa6.03□□□□□ -1.44
NEK9-205ENST00000555405 TRBV7-4A0A0J9YYF1 115 aa6.03□□□□□ -1.44
NEK9-205ENST00000555405 KRTAP1-4P0C5Y4 121 aa6.03□□□□□ -1.44
NEK9-205ENST00000555405 KRTAP10-4P60372 401 aaPredicted RBP6.02□□□□□ -1.45
NEK9-205ENST00000555405 LINC00483Q53H64 154 aa6.01□□□□□ -1.45
NEK9-205ENST00000555405 OBSCN-AS1Q96MR7 158 aa6.01□□□□□ -1.45
NEK9-205ENST00000555405 NREPQ16612 68 aa6.01□□□□□ -1.45
NEK9-205ENST00000555405 IGKV3D-7A0A0C4DH55 119 aa6.01□□□□□ -1.45
NEK9-205ENST00000555405 Q6JHZ5 121 aa6.01□□□□□ -1.45
NEK9-205ENST00000555405 PDE6GP18545 87 aa6□□□□□ -1.45
NEK9-205ENST00000555405 UBL5Q9BZL1 73 aa6□□□□□ -1.45
NEK9-205ENST00000555405 LRP1Q07954 4544 aaKnown RBP5.99□□□□□ -1.45
NEK9-205ENST00000555405 LOC110117498A0A087WWA1 95 aa5.99□□□□□ -1.45
NEK9-205ENST00000555405 LINC01600Q96MT4 127 aa5.99□□□□□ -1.45
NEK9-205ENST00000555405 SSBP3-AS1Q7Z2R9 100 aa5.97□□□□□ -1.45
NEK9-205ENST00000555405 MYCBP2O75592 4640 aa5.96□□□□□ -1.46
NEK9-205ENST00000555405 FAM229BQ4G0N7 80 aa5.96□□□□□ -1.46
NEK9-205ENST00000555405 LINC00304Q8N9R0 145 aa5.96□□□□□ -1.46
NEK9-205ENST00000555405 Q6ZVQ6 151 aa5.95□□□□□ -1.46
NEK9-205ENST00000555405 HIST1H4AP62805 103 aaKnown RBP5.95□□□□□ -1.46
NEK9-205ENST00000555405 Q8N9L7 120 aa5.95□□□□□ -1.46
NEK9-205ENST00000555405 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
NEK9-205ENST00000555405 IGLV8-61A0A075B6I0 122 aa5.95□□□□□ -1.46
NEK9-205ENST00000555405 BIRC6Q9NR09 4857 aa5.94□□□□□ -1.46
NEK9-205ENST00000555405 SIGMAR1Q99720 223 aa5.93□□□□□ -1.46
NEK9-205ENST00000555405 CDIP1Q9H305 208 aa5.93□□□□□ -1.46
NEK9-205ENST00000555405 TRBV7-7A0A0K0K1E9 115 aa5.93□□□□□ -1.46
NEK9-205ENST00000555405 ACYP1P07311 99 aa5.93□□□□□ -1.46
NEK9-205ENST00000555405 BPY2O14599 106 aa5.92□□□□□ -1.46
NEK9-205ENST00000555405 MT-ATP8P03928 68 aa5.92□□□□□ -1.46
NEK9-205ENST00000555405 IGKV4-1P06312 121 aa5.91□□□□□ -1.46
NEK9-205ENST00000555405 J3QL48 77 aa5.91□□□□□ -1.46
NEK9-205ENST00000555405 FAM240AA0A1B0GVK7 77 aa5.9□□□□□ -1.47
NEK9-205ENST00000555405 SS18L2Q9UHA2 77 aa5.89□□□□□ -1.47
NEK9-205ENST00000555405 LINC00643Q86TS7 51 aa5.88□□□□□ -1.47
NEK9-205ENST00000555405 A0A087WVE0 104 aa5.88□□□□□ -1.47
NEK9-205ENST00000555405 HERC2O95714 4834 aa5.87□□□□□ -1.47
NEK9-205ENST00000555405 IGHV6-1A0A0B4J1U7 121 aa5.86□□□□□ -1.47
NEK9-205ENST00000555405 SPINK1P00995 79 aa5.86□□□□□ -1.47
NEK9-205ENST00000555405 ABCA13Q86UQ4 5058 aa5.85□□□□□ -1.47
NEK9-205ENST00000555405 LIMD2Q9BT23 127 aa5.85□□□□□ -1.47
NEK9-205ENST00000555405 KRTAP3-3Q9BYR6 98 aa5.85□□□□□ -1.47
NEK9-205ENST00000555405 KRTAP3-2Q9BYR7 98 aa5.85□□□□□ -1.47
NEK9-205ENST00000555405 WFDC13Q8IUB5 93 aa5.84□□□□□ -1.47
NEK9-205ENST00000555405 SPAG11AQ6PDA7 123 aa5.84□□□□□ -1.48
NEK9-205ENST00000555405 K7EQZ3 153 aa5.83□□□□□ -1.48
NEK9-205ENST00000555405 NDUFB1O75438 58 aa5.83□□□□□ -1.48
NEK9-205ENST00000555405 PRR4Q16378 134 aa5.83□□□□□ -1.48
NEK9-205ENST00000555405 KRTAP10-8P60410 259 aa5.83□□□□□ -1.48
NEK9-205ENST00000555405 Q6Q795 121 aa5.83□□□□□ -1.48
NEK9-205ENST00000555405 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
NEK9-205ENST00000555405 CD164Q04900 197 aa5.82□□□□□ -1.48
NEK9-205ENST00000555405 C1orf195Q5TG92 126 aa5.82□□□□□ -1.48
NEK9-205ENST00000555405 C9orf92A6NGG3 77 aa5.81□□□□□ -1.48
NEK9-205ENST00000555405 SCGB1A1P11684 91 aa5.81□□□□□ -1.48
NEK9-205ENST00000555405 LINC00472Q9H8W2 130 aa5.81□□□□□ -1.48
NEK9-205ENST00000555405 DSCR10P59022 87 aa5.81□□□□□ -1.48
NEK9-205ENST00000555405 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
NEK9-205ENST00000555405 A0A1B0GW54 56 aa5.8□□□□□ -1.48
NEK9-205ENST00000555405 NDUFS5O43920 106 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms