RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 EPM2AB3EWF7 344 aa6.2□□□□□ -1.42
PSEN1-213ENST00000555386 HIST1H4AP62805 103 aaKnown RBP6.2□□□□□ -1.42
PSEN1-213ENST00000555386 Q6ZQT0 140 aa6.2□□□□□ -1.42
PSEN1-213ENST00000555386 KRTAP4-5Q9BYR2 181 aa6.2□□□□□ -1.42
PSEN1-213ENST00000555386 LAMTOR3Q9UHA4 124 aa6.2□□□□□ -1.42
PSEN1-213ENST00000555386 IGLV5-37A0A075B6J1 123 aa6.19□□□□□ -1.42
PSEN1-213ENST00000555386 B5MCH6 92 aa6.19□□□□□ -1.42
PSEN1-213ENST00000555386 NKAPP1Q8N9T2 125 aa6.19□□□□□ -1.42
PSEN1-213ENST00000555386 DSCR8Q96T75 97 aa6.19□□□□□ -1.42
PSEN1-213ENST00000555386 KCNQ1DNQ9H478 68 aa6.19□□□□□ -1.42
PSEN1-213ENST00000555386 PLAC8Q9NZF1 115 aa6.19□□□□□ -1.42
PSEN1-213ENST00000555386 PCLOQ9Y6V0 5065 aa6.18□□□□□ -1.42
PSEN1-213ENST00000555386 UBL5Q9BZL1 73 aa6.18□□□□□ -1.42
PSEN1-213ENST00000555386 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
PSEN1-213ENST00000555386 ATOX1O00244 68 aa6.17□□□□□ -1.42
PSEN1-213ENST00000555386 PLA2G1BP04054 148 aaKnown RBP6.17□□□□□ -1.42
PSEN1-213ENST00000555386 PHF5AQ7RTV0 110 aaKnown RBP6.17□□□□□ -1.42
PSEN1-213ENST00000555386 CCDC179H3BU77 68 aa6.16□□□□□ -1.42
PSEN1-213ENST00000555386 RPL37AP61513 92 aaKnown RBP6.16□□□□□ -1.42
PSEN1-213ENST00000555386 C7orf33Q8WU49 177 aa6.16□□□□□ -1.42
PSEN1-213ENST00000555386 IGKV3D-7A0A0C4DH55 119 aa6.15□□□□□ -1.42
PSEN1-213ENST00000555386 TRBV7-4A0A0J9YYF1 115 aa6.15□□□□□ -1.42
PSEN1-213ENST00000555386 SERTAD4-AS1Q5TG53 156 aa6.15□□□□□ -1.42
PSEN1-213ENST00000555386 PKHD1L1Q86WI1 4243 aa6.15□□□□□ -1.42
PSEN1-213ENST00000555386 FLG2Q5D862 2391 aaPredicted RBP6.15□□□□□ -1.43
PSEN1-213ENST00000555386 PRYO14603 147 aa6.15□□□□□ -1.43
PSEN1-213ENST00000555386 UQCRQO14949 82 aa6.14□□□□□ -1.43
PSEN1-213ENST00000555386 UBE2BP63146 152 aa6.14□□□□□ -1.43
PSEN1-213ENST00000555386 KRTAP7-1Q8IUC3 87 aa6.14□□□□□ -1.43
PSEN1-213ENST00000555386 DHRS4-AS1Q9P1J3 65 aa6.14□□□□□ -1.43
PSEN1-213ENST00000555386 C3orf22Q8N5N4 141 aa6.13□□□□□ -1.43
PSEN1-213ENST00000555386 IGLV1-50A0A075B6I6 118 aa6.12□□□□□ -1.43
PSEN1-213ENST00000555386 SPRR1AP35321 89 aa6.12□□□□□ -1.43
PSEN1-213ENST00000555386 COX7CP15954 63 aa6.11□□□□□ -1.43
PSEN1-213ENST00000555386 Q6ZRX8 168 aa6.11□□□□□ -1.43
PSEN1-213ENST00000555386 RPL37AP8A6NKH3 93 aa6.1□□□□□ -1.43
PSEN1-213ENST00000555386 KRTAP4-16G5E9R7 235 aaPredicted RBP6.1□□□□□ -1.43
PSEN1-213ENST00000555386 CXCL6P80162 114 aa6.1□□□□□ -1.43
PSEN1-213ENST00000555386 KRTAP11-1Q8IUC1 163 aa6.1□□□□□ -1.43
PSEN1-213ENST00000555386 A0A1B0GW54 56 aa6.09□□□□□ -1.43
PSEN1-213ENST00000555386 BCE1O60756 84 aa6.09□□□□□ -1.43
PSEN1-213ENST00000555386 Q6ZVQ6 151 aa6.09□□□□□ -1.43
PSEN1-213ENST00000555386 MRPL55Q7Z7F7 128 aaKnown RBP6.09□□□□□ -1.43
PSEN1-213ENST00000555386 PSORS1C2Q9UIG4 136 aa6.09□□□□□ -1.43
PSEN1-213ENST00000555386 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
PSEN1-213ENST00000555386 ETDCA0A1B0GVM5 59 aa6.09□□□□□ -1.44
PSEN1-213ENST00000555386 LINC01547P58512 204 aaPredicted RBP6.09□□□□□ -1.44
PSEN1-213ENST00000555386 KRTAP10-4P60372 401 aaPredicted RBP6.09□□□□□ -1.44
PSEN1-213ENST00000555386 C1orf137Q5JT78 98 aa6.09□□□□□ -1.44
PSEN1-213ENST00000555386 SERP2Q8N6R1 65 aa6.09□□□□□ -1.44
PSEN1-213ENST00000555386 IGLV5-48A0A075B6I7 105 aa6.08□□□□□ -1.44
PSEN1-213ENST00000555386 A0A087WVE0 104 aa6.08□□□□□ -1.44
PSEN1-213ENST00000555386 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
PSEN1-213ENST00000555386 CRYGAP11844 174 aa6.08□□□□□ -1.44
PSEN1-213ENST00000555386 C9orf153Q5TBE3 101 aa6.08□□□□□ -1.44
PSEN1-213ENST00000555386 KRTAP4-6Q9BYQ5 205 aa6.08□□□□□ -1.44
PSEN1-213ENST00000555386 Q8N377 158 aa6.06□□□□□ -1.44
PSEN1-213ENST00000555386 SS18L2Q9UHA2 77 aa6.06□□□□□ -1.44
PSEN1-213ENST00000555386 LRP1Q07954 4544 aaKnown RBP6.05□□□□□ -1.44
PSEN1-213ENST00000555386 FAT3Q8TDW7 4589 aa6.05□□□□□ -1.44
PSEN1-213ENST00000555386 FAM19A1Q7Z5A9 133 aa6.05□□□□□ -1.44
PSEN1-213ENST00000555386 SMIM20Q8N5G0 67 aa6.05□□□□□ -1.44
PSEN1-213ENST00000555386 Q9BRP9 147 aa6.05□□□□□ -1.44
PSEN1-213ENST00000555386 REG3GQ6UW15 175 aa6.04□□□□□ -1.44
PSEN1-213ENST00000555386 IGLV7-43P04211 117 aa6.02□□□□□ -1.45
PSEN1-213ENST00000555386 DEFB105AQ8NG35 78 aa6.02□□□□□ -1.45
PSEN1-213ENST00000555386 NREPQ16612 68 aa6.01□□□□□ -1.45
PSEN1-213ENST00000555386 UBE2AP49459 152 aa6□□□□□ -1.45
PSEN1-213ENST00000555386 TRAV7A0A075B6U4 112 aa5.99□□□□□ -1.45
PSEN1-213ENST00000555386 H0Y9J4 135 aa5.98□□□□□ -1.45
PSEN1-213ENST00000555386 PRLHP81277 87 aa5.98□□□□□ -1.45
PSEN1-213ENST00000555386 SPINK6Q6UWN8 80 aa5.98□□□□□ -1.45
PSEN1-213ENST00000555386 ST20-AS1Q8NBB2 130 aa5.98□□□□□ -1.45
PSEN1-213ENST00000555386 Q8NBF4 154 aa5.98□□□□□ -1.45
PSEN1-213ENST00000555386 SPRR4Q96PI1 79 aa5.98□□□□□ -1.45
PSEN1-213ENST00000555386 ERC2-IT1O76042 136 aa5.97□□□□□ -1.45
PSEN1-213ENST00000555386 TMEM258P61165 79 aa5.97□□□□□ -1.45
PSEN1-213ENST00000555386 DMBT1Q9UGM3 2413 aaPredicted RBP5.97□□□□□ -1.45
PSEN1-213ENST00000555386 A0A1W2PNM2 257 aa5.96□□□□□ -1.45
PSEN1-213ENST00000555386 F8WEM9 126 aa5.96□□□□□ -1.45
PSEN1-213ENST00000555386 TNXBP22105 4242 aa5.96□□□□□ -1.46
PSEN1-213ENST00000555386 IGLV8-61A0A075B6I0 122 aa5.96□□□□□ -1.46
PSEN1-213ENST00000555386 BPY2O14599 106 aa5.96□□□□□ -1.46
PSEN1-213ENST00000555386 ZNF861PO60384 105 aa5.96□□□□□ -1.46
PSEN1-213ENST00000555386 SMIM29Q86T20 159 aa5.96□□□□□ -1.46
PSEN1-213ENST00000555386 HIGD2AQ9BW72 106 aa5.95□□□□□ -1.46
PSEN1-213ENST00000555386 HERC1Q15751 4861 aa5.94□□□□□ -1.46
PSEN1-213ENST00000555386 IGKV4-1P06312 121 aa5.94□□□□□ -1.46
PSEN1-213ENST00000555386 SPRR1BP22528 89 aa5.93□□□□□ -1.46
PSEN1-213ENST00000555386 RPS28P62857 69 aaKnown RBP5.92□□□□□ -1.46
PSEN1-213ENST00000555386 KRTAP29-1A8MX34 341 aaPredicted RBP5.91□□□□□ -1.46
PSEN1-213ENST00000555386 OXTP01178 125 aa5.91□□□□□ -1.46
PSEN1-213ENST00000555386 KLKP1Q107X0 134 aa5.91□□□□□ -1.46
PSEN1-213ENST00000555386 KRTAP13-1Q8IUC0 172 aa5.91□□□□□ -1.46
PSEN1-213ENST00000555386 ANAPC11Q9NYG5 84 aa5.91□□□□□ -1.46
PSEN1-213ENST00000555386 C20orf197Q8N268 126 aa5.9□□□□□ -1.46
PSEN1-213ENST00000555386 CYSTM1Q9H1C7 97 aa5.9□□□□□ -1.46
PSEN1-213ENST00000555386 J3KT08 172 aa5.9□□□□□ -1.47
PSEN1-213ENST00000555386 IGFL1Q6UW32 110 aa5.9□□□□□ -1.47
PSEN1-213ENST00000555386 PRR26Q8N8Z3 221 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms