RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 F8WEM9 126 aa6.49□□□□□ -1.37
VRK1-204ENST00000555351 BVES-AS1Q5T3Y7 98 aa6.49□□□□□ -1.37
VRK1-204ENST00000555351 PPDPFLQ8WWR9 84 aa6.49□□□□□ -1.37
VRK1-204ENST00000555351 FAT4Q6V0I7 4981 aa6.48□□□□□ -1.37
VRK1-204ENST00000555351 IGLV8-61A0A075B6I0 122 aa6.48□□□□□ -1.37
VRK1-204ENST00000555351 HIST1H4GQ99525 98 aa6.48□□□□□ -1.37
VRK1-204ENST00000555351 TCL1BO95988 128 aa6.47□□□□□ -1.37
VRK1-204ENST00000555351 C1orf195Q5TG92 126 aa6.47□□□□□ -1.37
VRK1-204ENST00000555351 Q6JHZ5 121 aa6.47□□□□□ -1.37
VRK1-204ENST00000555351 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.47□□□□□ -1.37
VRK1-204ENST00000555351 Q6ZQY7 126 aa6.47□□□□□ -1.37
VRK1-204ENST00000555351 KRTAP4-1Q9BYQ7 146 aa6.46□□□□□ -1.38
VRK1-204ENST00000555351 HIGD1BQ9P298 99 aa6.46□□□□□ -1.38
VRK1-204ENST00000555351 SNCGO76070 127 aa6.43□□□□□ -1.38
VRK1-204ENST00000555351 OCIAD2Q56VL3 154 aa6.43□□□□□ -1.38
VRK1-204ENST00000555351 CLEC2BQ92478 149 aa6.43□□□□□ -1.38
VRK1-204ENST00000555351 A0A0B4J2C4 111 aa6.42□□□□□ -1.38
VRK1-204ENST00000555351 A0A0G2JQZ4 141 aa6.42□□□□□ -1.38
VRK1-204ENST00000555351 C9orf92A6NGG3 77 aa6.42□□□□□ -1.38
VRK1-204ENST00000555351 H0YGX0 51 aa6.41□□□□□ -1.38
VRK1-204ENST00000555351 CFC1BP0CG36 223 aa6.41□□□□□ -1.38
VRK1-204ENST00000555351 CFC1P0CG37 223 aa6.41□□□□□ -1.38
VRK1-204ENST00000555351 C12orf57Q99622 126 aa6.41□□□□□ -1.38
VRK1-204ENST00000555351 TRBV7-7A0A0K0K1E9 115 aa6.4□□□□□ -1.38
VRK1-204ENST00000555351 SPATA45Q537H7 98 aa6.4□□□□□ -1.38
VRK1-204ENST00000555351 IGFL1Q6UW32 110 aa6.4□□□□□ -1.38
VRK1-204ENST00000555351 RAB37Q96AX2 223 aa6.4□□□□□ -1.38
VRK1-204ENST00000555351 C14orf144Q96I85 54 aa6.4□□□□□ -1.38
VRK1-204ENST00000555351 VAMP8Q9BV40 100 aa6.4□□□□□ -1.38
VRK1-204ENST00000555351 PCOTHQ58A44 107 aa6.39□□□□□ -1.39
VRK1-204ENST00000555351 SNHG12Q9BXW3 62 aa6.39□□□□□ -1.39
VRK1-204ENST00000555351 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
VRK1-204ENST00000555351 PAM16Q9Y3D7 125 aa6.39□□□□□ -1.39
VRK1-204ENST00000555351 A0A1B0GX51 115 aa6.38□□□□□ -1.39
VRK1-204ENST00000555351 C2orf91Q6ZV80 131 aa6.38□□□□□ -1.39
VRK1-204ENST00000555351 RPL37P61927 97 aaKnown RBP6.37□□□□□ -1.39
VRK1-204ENST00000555351 Q6Q795 121 aa6.36□□□□□ -1.39
VRK1-204ENST00000555351 CEND1Q8N111 149 aa6.36□□□□□ -1.39
VRK1-204ENST00000555351 PRO1854Q9UHT4 67 aa6.35□□□□□ -1.39
VRK1-204ENST00000555351 SS18L2Q9UHA2 77 aa6.34□□□□□ -1.39
VRK1-204ENST00000555351 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
VRK1-204ENST00000555351 NDUFV3P56181 108 aaKnown RBP6.32□□□□□ -1.4
VRK1-204ENST00000555351 TEN1Q86WV5 123 aa6.32□□□□□ -1.4
VRK1-204ENST00000555351 H3BUT2 72 aa6.31□□□□□ -1.4
VRK1-204ENST00000555351 LST1O00453 97 aa6.31□□□□□ -1.4
VRK1-204ENST00000555351 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
VRK1-204ENST00000555351 H3BQ85 93 aa6.3□□□□□ -1.4
VRK1-204ENST00000555351 FXYD2P54710 66 aa6.29□□□□□ -1.4
VRK1-204ENST00000555351 HSD52Q0P140 79 aa6.29□□□□□ -1.4
VRK1-204ENST00000555351 H3BMG7 143 aa6.28□□□□□ -1.4
VRK1-204ENST00000555351 PYY3Q5JQD4 70 aa6.28□□□□□ -1.4
VRK1-204ENST00000555351 Q75L30 129 aa6.28□□□□□ -1.4
VRK1-204ENST00000555351 TRIAP1O43715 76 aa6.27□□□□□ -1.41
VRK1-204ENST00000555351 MT1HP80294 61 aa6.26□□□□□ -1.41
VRK1-204ENST00000555351 OBSCN-AS1Q96MR7 158 aa6.26□□□□□ -1.41
VRK1-204ENST00000555351 H3BS24 57 aa6.25□□□□□ -1.41
VRK1-204ENST00000555351 COX6CP09669 75 aa6.25□□□□□ -1.41
VRK1-204ENST00000555351 FABP2P12104 132 aa6.25□□□□□ -1.41
VRK1-204ENST00000555351 DNAL4O96015 105 aa6.24□□□□□ -1.41
VRK1-204ENST00000555351 ATP11AUNQ6ZP68 121 aa6.24□□□□□ -1.41
VRK1-204ENST00000555351 A0A087WSZ3 146 aa6.23□□□□□ -1.41
VRK1-204ENST00000555351 TMEM256-PLSCR3K7ERE1 68 aa6.23□□□□□ -1.41
VRK1-204ENST00000555351 ORMDL1Q9P0S3 153 aa6.23□□□□□ -1.41
VRK1-204ENST00000555351 TRBV7-4A0A0J9YYF1 115 aa6.22□□□□□ -1.41
VRK1-204ENST00000555351 PSMB2P49721 201 aa6.22□□□□□ -1.41
VRK1-204ENST00000555351 UQCR10Q9UDW1 63 aa6.22□□□□□ -1.41
VRK1-204ENST00000555351 A0A1W2PNM2 257 aa6.21□□□□□ -1.42
VRK1-204ENST00000555351 Q96NJ1 140 aa6.21□□□□□ -1.42
VRK1-204ENST00000555351 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
VRK1-204ENST00000555351 ANKRD29Q8N6D5 301 aa6.2□□□□□ -1.42
VRK1-204ENST00000555351 TMA7Q9Y2S6 64 aaKnown RBP6.2□□□□□ -1.42
VRK1-204ENST00000555351 KRTAP9-6A0A140TA67 174 aa6.19□□□□□ -1.42
VRK1-204ENST00000555351 A8MUU9 505 aa6.19□□□□□ -1.42
VRK1-204ENST00000555351 UBE2V1Q13404 147 aa6.19□□□□□ -1.42
VRK1-204ENST00000555351 COX6B2Q6YFQ2 88 aa6.19□□□□□ -1.42
VRK1-204ENST00000555351 K7ERJ3 54 aa6.18□□□□□ -1.42
VRK1-204ENST00000555351 TRACP01848 142 aa6.18□□□□□ -1.42
VRK1-204ENST00000555351 KRTAP10-6P60371 365 aaPredicted RBP6.15□□□□□ -1.42
VRK1-204ENST00000555351 CCKP06307 115 aa6.14□□□□□ -1.43
VRK1-204ENST00000555351 C21orf62-AS1Q17RA5 79 aa6.14□□□□□ -1.43
VRK1-204ENST00000555351 SIGMAR1Q99720 223 aa6.14□□□□□ -1.43
VRK1-204ENST00000555351 M0R2T5 61 aa6.13□□□□□ -1.43
VRK1-204ENST00000555351 LINC00313P59037 77 aa6.13□□□□□ -1.43
VRK1-204ENST00000555351 LINC00472Q9H8W2 130 aa6.13□□□□□ -1.43
VRK1-204ENST00000555351 IGKV4-1P06312 121 aa6.12□□□□□ -1.43
VRK1-204ENST00000555351 SCGB1C2P0DMR2 95 aa6.12□□□□□ -1.43
VRK1-204ENST00000555351 DSCR10P59022 87 aa6.11□□□□□ -1.43
VRK1-204ENST00000555351 RBM3P98179 157 aaKnown RBP6.11□□□□□ -1.43
VRK1-204ENST00000555351 KRTAP16-1A8MUX0 517 aa6.09□□□□□ -1.43
VRK1-204ENST00000555351 DSCR8Q96T75 97 aa6.09□□□□□ -1.43
VRK1-204ENST00000555351 TRBV20-1A0A075B6N2 111 aa6.08□□□□□ -1.44
VRK1-204ENST00000555351 A0A1B0GV72 72 aa6.08□□□□□ -1.44
VRK1-204ENST00000555351 M0R143 59 aa6.08□□□□□ -1.44
VRK1-204ENST00000555351 A0A1B0GW54 56 aa6.07□□□□□ -1.44
VRK1-204ENST00000555351 BAALC-AS2P0C853 105 aa6.07□□□□□ -1.44
VRK1-204ENST00000555351 C9JAW5 83 aa6.06□□□□□ -1.44
VRK1-204ENST00000555351 C8orf87E5RJ46 101 aa6.06□□□□□ -1.44
VRK1-204ENST00000555351 J3KT08 172 aa6.06□□□□□ -1.44
VRK1-204ENST00000555351 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
VRK1-204ENST00000555351 FLGP20930 4061 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms