RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 ALMS1Q8TCU4 4167 aa8.94□□□□□ -0.98
IFT43-209ENST00000555305 FAM236AA0A1B0GUQ0 79 aa8.94□□□□□ -0.98
IFT43-209ENST00000555305 FAM236BA0A1B0GV22 79 aa8.94□□□□□ -0.98
IFT43-209ENST00000555305 KMT2AQ03164 3969 aa8.94□□□□□ -0.98
IFT43-209ENST00000555305 PSORS1C2Q9UIG4 136 aa8.94□□□□□ -0.98
IFT43-209ENST00000555305 HIST1H4AP62805 103 aaKnown RBP8.93□□□□□ -0.98
IFT43-209ENST00000555305 A0A1W2PNM2 257 aa8.92□□□□□ -0.98
IFT43-209ENST00000555305 CRYGAP11844 174 aa8.92□□□□□ -0.98
IFT43-209ENST00000555305 KRTAP10-2P60368 255 aa8.92□□□□□ -0.98
IFT43-209ENST00000555305 ZNF861PO60384 105 aa8.91□□□□□ -0.98
IFT43-209ENST00000555305 ATOX1O00244 68 aa8.91□□□□□ -0.98
IFT43-209ENST00000555305 RPL37AP61513 92 aaKnown RBP8.91□□□□□ -0.98
IFT43-209ENST00000555305 LINC00336Q6ZUF6 198 aa8.91□□□□□ -0.98
IFT43-209ENST00000555305 IGFL1Q6UW32 110 aa8.9□□□□□ -0.98
IFT43-209ENST00000555305 Q6ZSA8 131 aa8.9□□□□□ -0.98
IFT43-209ENST00000555305 LCE6AA0A183 80 aa8.89□□□□□ -0.99
IFT43-209ENST00000555305 LINC00483Q53H64 154 aa8.89□□□□□ -0.99
IFT43-209ENST00000555305 TGP01266 2768 aa8.88□□□□□ -0.99
IFT43-209ENST00000555305 BPY2O14599 106 aa8.86□□□□□ -0.99
IFT43-209ENST00000555305 SMIM20Q8N5G0 67 aa8.86□□□□□ -0.99
IFT43-209ENST00000555305 CIRBP-AS1Q8TBR5 109 aa8.86□□□□□ -0.99
IFT43-209ENST00000555305 IGLV7-43P04211 117 aa8.86□□□□□ -0.99
IFT43-209ENST00000555305 DNAH2Q9P225 4427 aa8.85□□□□□ -0.99
IFT43-209ENST00000555305 A0A087WVE0 104 aa8.84□□□□□ -1
IFT43-209ENST00000555305 SCXQ7RTU7 201 aa8.84□□□□□ -1
IFT43-209ENST00000555305 HECTD4Q9Y4D8 3996 aa8.83□□□□□ -1
IFT43-209ENST00000555305 FAM30AQ9NZY2 134 aa8.83□□□□□ -1
IFT43-209ENST00000555305 DNAH17Q9UFH2 4485 aa8.82□□□□□ -1
IFT43-209ENST00000555305 KRTAP10-1P60331 282 aa8.82□□□□□ -1
IFT43-209ENST00000555305 UQCRQO14949 82 aa8.79□□□□□ -1
IFT43-209ENST00000555305 A0A087WSZ3 146 aa8.78□□□□□ -1
IFT43-209ENST00000555305 C9orf153Q5TBE3 101 aa8.78□□□□□ -1
IFT43-209ENST00000555305 IGLV9-49A0A0B4J1Y8 123 aa8.76□□□□□ -1.01
IFT43-209ENST00000555305 SERP2Q8N6R1 65 aa8.76□□□□□ -1.01
IFT43-209ENST00000555305 COX7CP15954 63 aa8.76□□□□□ -1.01
IFT43-209ENST00000555305 IGKV4-1P06312 121 aa8.75□□□□□ -1.01
IFT43-209ENST00000555305 FRAS1Q86XX4 4008 aa8.75□□□□□ -1.01
IFT43-209ENST00000555305 A0A0G2JQZ4 141 aa8.73□□□□□ -1.01
IFT43-209ENST00000555305 J3KT08 172 aa8.72□□□□□ -1.01
IFT43-209ENST00000555305 RPS28P62857 69 aaKnown RBP8.71□□□□□ -1.01
IFT43-209ENST00000555305 MOBPQ13875 183 aa8.71□□□□□ -1.02
IFT43-209ENST00000555305 DSCR10P59022 87 aa8.7□□□□□ -1.02
IFT43-209ENST00000555305 SSBP3-AS1Q7Z2R9 100 aa8.7□□□□□ -1.02
IFT43-209ENST00000555305 TRAV7A0A075B6U4 112 aa8.69□□□□□ -1.02
IFT43-209ENST00000555305 FAM229BQ4G0N7 80 aa8.69□□□□□ -1.02
IFT43-209ENST00000555305 CD164Q04900 197 aa8.68□□□□□ -1.02
IFT43-209ENST00000555305 Q8N9L7 120 aa8.68□□□□□ -1.02
IFT43-209ENST00000555305 HYDINQ4G0P3 5121 aa8.67□□□□□ -1.02
IFT43-209ENST00000555305 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
IFT43-209ENST00000555305 LINC00472Q9H8W2 130 aa8.67□□□□□ -1.02
IFT43-209ENST00000555305 K7EQZ3 153 aa8.65□□□□□ -1.02
IFT43-209ENST00000555305 FAT2Q9NYQ8 4349 aa8.65□□□□□ -1.03
IFT43-209ENST00000555305 DNAH11Q96DT5 4516 aa8.64□□□□□ -1.03
IFT43-209ENST00000555305 A8MWP4 228 aa8.64□□□□□ -1.03
IFT43-209ENST00000555305 DNAH5Q8TE73 4624 aa8.64□□□□□ -1.03
IFT43-209ENST00000555305 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
IFT43-209ENST00000555305 HCG22E2RYF7 251 aa8.63□□□□□ -1.03
IFT43-209ENST00000555305 NDUFB1O75438 58 aa8.63□□□□□ -1.03
IFT43-209ENST00000555305 C5orf47Q569G3 176 aa8.63□□□□□ -1.03
IFT43-209ENST00000555305 PKD1P98161 4303 aa8.61□□□□□ -1.03
IFT43-209ENST00000555305 DNAH8Q96JB1 4490 aa8.61□□□□□ -1.03
IFT43-209ENST00000555305 TMEM258P61165 79 aa8.61□□□□□ -1.03
IFT43-209ENST00000555305 PRR15Q8IV56 129 aa8.61□□□□□ -1.03
IFT43-209ENST00000555305 SPINK6Q6UWN8 80 aa8.61□□□□□ -1.03
IFT43-209ENST00000555305 DEFB116Q30KQ4 102 aa8.59□□□□□ -1.03
IFT43-209ENST00000555305 SRRM2Q9UQ35 2752 aaKnown RBP8.59□□□□□ -1.03
IFT43-209ENST00000555305 HRCT1Q6UXD1 115 aa8.58□□□□□ -1.04
IFT43-209ENST00000555305 OCR1Q9BZK8 76 aa8.57□□□□□ -1.04
IFT43-209ENST00000555305 CDK2AP2O75956 126 aa8.56□□□□□ -1.04
IFT43-209ENST00000555305 ASB16-AS1Q495Z4 193 aa8.56□□□□□ -1.04
IFT43-209ENST00000555305 Q96NJ1 140 aa8.56□□□□□ -1.04
IFT43-209ENST00000555305 SACSQ9NZJ4 4579 aa8.56□□□□□ -1.04
IFT43-209ENST00000555305 KRTAP1-4P0C5Y4 121 aa8.54□□□□□ -1.04
IFT43-209ENST00000555305 Q5XG85 94 aa8.54□□□□□ -1.04
IFT43-209ENST00000555305 KLKP1Q107X0 134 aa8.53□□□□□ -1.04
IFT43-209ENST00000555305 A0A087X002 238 aa8.53□□□□□ -1.04
IFT43-209ENST00000555305 CASC2Q6XLA1 102 aa8.53□□□□□ -1.04
IFT43-209ENST00000555305 C20orf197Q8N268 126 aa8.53□□□□□ -1.04
IFT43-209ENST00000555305 PLA2G1BP04054 148 aaKnown RBP8.52□□□□□ -1.05
IFT43-209ENST00000555305 NDUFC1O43677 76 aa8.51□□□□□ -1.05
IFT43-209ENST00000555305 KRTAP13-2Q52LG2 175 aa8.51□□□□□ -1.05
IFT43-209ENST00000555305 LIMD2Q9BT23 127 aa8.51□□□□□ -1.05
IFT43-209ENST00000555305 KRTAP29-1A8MX34 341 aaPredicted RBP8.5□□□□□ -1.05
IFT43-209ENST00000555305 A0A1B0GVX0 72 aa8.49□□□□□ -1.05
IFT43-209ENST00000555305 WFDC13Q8IUB5 93 aa8.49□□□□□ -1.05
IFT43-209ENST00000555305 C4orf48Q5BLP8 95 aa8.48□□□□□ -1.05
IFT43-209ENST00000555305 TMEM254Q8TBM7 123 aa8.48□□□□□ -1.05
IFT43-209ENST00000555305 CYSTM1Q9H1C7 97 aa8.48□□□□□ -1.05
IFT43-209ENST00000555305 TYMSOSQ8TAI1 123 aa8.47□□□□□ -1.05
IFT43-209ENST00000555305 RYR2Q92736 4967 aa8.47□□□□□ -1.05
IFT43-209ENST00000555305 MMP24-AS1A0A0U1RRL7 71 aa8.46□□□□□ -1.05
IFT43-209ENST00000555305 hDV103S1A0JD37 113 aa8.46□□□□□ -1.05
IFT43-209ENST00000555305 SPINK1P00995 79 aa8.45□□□□□ -1.06
IFT43-209ENST00000555305 RPS29P62273 56 aaKnown RBP8.45□□□□□ -1.06
IFT43-209ENST00000555305 C8orf17Q9NRJ1 99 aa8.45□□□□□ -1.06
IFT43-209ENST00000555305 SMR3BP02814 79 aaPredicted RBP8.44□□□□□ -1.06
IFT43-209ENST00000555305 SPAG11AQ6PDA7 123 aa8.44□□□□□ -1.06
IFT43-209ENST00000555305 LRP1BQ9NZR2 4599 aa8.44□□□□□ -1.06
IFT43-209ENST00000555305 TP53AIP1Q9HCN2 124 aa8.43□□□□□ -1.06
IFT43-209ENST00000555305 IGHV6-1A0A0B4J1U7 121 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms