RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 Q6ZQY7 126 aa6.55□□□□□ -1.36
SHMT2-218ENST00000555213 ST20-AS1Q8NBB2 130 aa6.55□□□□□ -1.36
SHMT2-218ENST00000555213 DHRS4-AS1Q9P1J3 65 aa6.55□□□□□ -1.36
SHMT2-218ENST00000555213 ETDBQ3ZM63 59 aa6.54□□□□□ -1.36
SHMT2-218ENST00000555213 Q8N377 158 aa6.54□□□□□ -1.36
SHMT2-218ENST00000555213 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
SHMT2-218ENST00000555213 ORMDL1Q9P0S3 153 aa6.53□□□□□ -1.36
SHMT2-218ENST00000555213 IGLV5-48A0A075B6I7 105 aa6.52□□□□□ -1.37
SHMT2-218ENST00000555213 DNAL4O96015 105 aa6.52□□□□□ -1.37
SHMT2-218ENST00000555213 CRYGAP11844 174 aa6.52□□□□□ -1.37
SHMT2-218ENST00000555213 FAM229BQ4G0N7 80 aa6.52□□□□□ -1.37
SHMT2-218ENST00000555213 OBSCN-AS1Q96MR7 158 aa6.52□□□□□ -1.37
SHMT2-218ENST00000555213 SPRR4Q96PI1 79 aa6.52□□□□□ -1.37
SHMT2-218ENST00000555213 SNCGO76070 127 aa6.51□□□□□ -1.37
SHMT2-218ENST00000555213 TEN1Q86WV5 123 aa6.51□□□□□ -1.37
SHMT2-218ENST00000555213 PRR26Q8N8Z3 221 aa6.51□□□□□ -1.37
SHMT2-218ENST00000555213 TMEM256-PLSCR3K7ERE1 68 aa6.5□□□□□ -1.37
SHMT2-218ENST00000555213 OCIAD2Q56VL3 154 aa6.5□□□□□ -1.37
SHMT2-218ENST00000555213 SMIM29Q86T20 159 aa6.5□□□□□ -1.37
SHMT2-218ENST00000555213 TEX49A0A1B0GTD5 131 aa6.49□□□□□ -1.37
SHMT2-218ENST00000555213 DEFB105AQ8NG35 78 aa6.49□□□□□ -1.37
SHMT2-218ENST00000555213 MYCBP2O75592 4640 aa6.49□□□□□ -1.37
SHMT2-218ENST00000555213 PKHD1L1Q86WI1 4243 aa6.48□□□□□ -1.37
SHMT2-218ENST00000555213 MT1HL1P0DM35 61 aa6.48□□□□□ -1.37
SHMT2-218ENST00000555213 SPRR1BP22528 89 aa6.48□□□□□ -1.37
SHMT2-218ENST00000555213 GAGE2AQ6NT46 116 aa6.48□□□□□ -1.37
SHMT2-218ENST00000555213 KRTAP10-8P60410 259 aa6.47□□□□□ -1.37
SHMT2-218ENST00000555213 LINC00483Q53H64 154 aa6.47□□□□□ -1.37
SHMT2-218ENST00000555213 ANAPC11Q9NYG5 84 aa6.47□□□□□ -1.37
SHMT2-218ENST00000555213 A0A087X002 238 aa6.46□□□□□ -1.38
SHMT2-218ENST00000555213 H3BQ85 93 aa6.46□□□□□ -1.38
SHMT2-218ENST00000555213 NDUFV3P56181 108 aaKnown RBP6.46□□□□□ -1.38
SHMT2-218ENST00000555213 TYMSOSQ8TAI1 123 aa6.46□□□□□ -1.38
SHMT2-218ENST00000555213 PPDPFLQ8WWR9 84 aa6.46□□□□□ -1.38
SHMT2-218ENST00000555213 C3orf22Q8N5N4 141 aa6.45□□□□□ -1.38
SHMT2-218ENST00000555213 GHRHP01286 108 aa6.42□□□□□ -1.38
SHMT2-218ENST00000555213 KRTAP13-2Q52LG2 175 aa6.42□□□□□ -1.38
SHMT2-218ENST00000555213 IGLV9-49A0A0B4J1Y8 123 aa6.41□□□□□ -1.38
SHMT2-218ENST00000555213 TRBV7-4A0A0J9YYF1 115 aa6.41□□□□□ -1.38
SHMT2-218ENST00000555213 A0A1B0GV72 72 aa6.41□□□□□ -1.38
SHMT2-218ENST00000555213 JMJD7-PLA2G4BH0Y9G9 81 aa6.41□□□□□ -1.38
SHMT2-218ENST00000555213 RBM3P98179 157 aaKnown RBP6.41□□□□□ -1.38
SHMT2-218ENST00000555213 C9orf153Q5TBE3 101 aa6.41□□□□□ -1.38
SHMT2-218ENST00000555213 C14orf132Q9NPU4 83 aa6.41□□□□□ -1.38
SHMT2-218ENST00000555213 LAMTOR3Q9UHA4 124 aa6.41□□□□□ -1.38
SHMT2-218ENST00000555213 LRP1Q07954 4544 aaKnown RBP6.41□□□□□ -1.38
SHMT2-218ENST00000555213 IGLV8-61A0A075B6I0 122 aa6.4□□□□□ -1.38
SHMT2-218ENST00000555213 MOBPQ13875 183 aa6.4□□□□□ -1.38
SHMT2-218ENST00000555213 LINC00304Q8N9R0 145 aa6.4□□□□□ -1.38
SHMT2-218ENST00000555213 LOC110117498A0A087WWA1 95 aa6.39□□□□□ -1.39
SHMT2-218ENST00000555213 LCE2BO14633 110 aa6.39□□□□□ -1.39
SHMT2-218ENST00000555213 Q6ZQT0 140 aa6.39□□□□□ -1.39
SHMT2-218ENST00000555213 Q8NBF4 154 aa6.39□□□□□ -1.39
SHMT2-218ENST00000555213 A0A0G2JQZ4 141 aa6.38□□□□□ -1.39
SHMT2-218ENST00000555213 FAT3Q8TDW7 4589 aa6.38□□□□□ -1.39
SHMT2-218ENST00000555213 F8WEM9 126 aa6.37□□□□□ -1.39
SHMT2-218ENST00000555213 CCKP06307 115 aa6.37□□□□□ -1.39
SHMT2-218ENST00000555213 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
SHMT2-218ENST00000555213 SSBP3-AS1Q7Z2R9 100 aa6.37□□□□□ -1.39
SHMT2-218ENST00000555213 A0A1W2PNM2 257 aa6.35□□□□□ -1.39
SHMT2-218ENST00000555213 IGFL1Q6UW32 110 aa6.35□□□□□ -1.39
SHMT2-218ENST00000555213 HMCN2Q8NDA2 5059 aa6.35□□□□□ -1.39
SHMT2-218ENST00000555213 DSCR8Q96T75 97 aa6.34□□□□□ -1.39
SHMT2-218ENST00000555213 K7ERU9 68 aa6.33□□□□□ -1.4
SHMT2-218ENST00000555213 PDE6GP18545 87 aa6.33□□□□□ -1.4
SHMT2-218ENST00000555213 CDIP1Q9H305 208 aa6.33□□□□□ -1.4
SHMT2-218ENST00000555213 SPINK1P00995 79 aa6.32□□□□□ -1.4
SHMT2-218ENST00000555213 FAM240AA0A1B0GVK7 77 aa6.31□□□□□ -1.4
SHMT2-218ENST00000555213 TNXBP22105 4242 aa6.3□□□□□ -1.4
SHMT2-218ENST00000555213 J3QR89 54 aa6.3□□□□□ -1.4
SHMT2-218ENST00000555213 Q6JHZ5 121 aa6.3□□□□□ -1.4
SHMT2-218ENST00000555213 LINC00846Q9NV44 126 aa6.3□□□□□ -1.4
SHMT2-218ENST00000555213 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
SHMT2-218ENST00000555213 ACYP1P07311 99 aa6.28□□□□□ -1.4
SHMT2-218ENST00000555213 Q6Q795 121 aa6.28□□□□□ -1.4
SHMT2-218ENST00000555213 LIMD2Q9BT23 127 aa6.28□□□□□ -1.4
SHMT2-218ENST00000555213 CD164Q04900 197 aa6.27□□□□□ -1.41
SHMT2-218ENST00000555213 PRR4Q16378 134 aa6.26□□□□□ -1.41
SHMT2-218ENST00000555213 VPS25Q9BRG1 176 aa6.26□□□□□ -1.41
SHMT2-218ENST00000555213 HRCT1Q6UXD1 115 aa6.25□□□□□ -1.41
SHMT2-218ENST00000555213 A0A1B0GW54 56 aa6.24□□□□□ -1.41
SHMT2-218ENST00000555213 C21orf62-AS1Q17RA5 79 aa6.23□□□□□ -1.41
SHMT2-218ENST00000555213 RETNLBQ9BQ08 111 aa6.23□□□□□ -1.41
SHMT2-218ENST00000555213 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
SHMT2-218ENST00000555213 Q6ZVQ6 151 aa6.22□□□□□ -1.41
SHMT2-218ENST00000555213 FP248Q71RG6 208 aaPredicted RBP6.21□□□□□ -1.42
SHMT2-218ENST00000555213 A0A087WSZ3 146 aa6.2□□□□□ -1.42
SHMT2-218ENST00000555213 MT-ATP8P03928 68 aa6.19□□□□□ -1.42
SHMT2-218ENST00000555213 Q5XG85 94 aa6.19□□□□□ -1.42
SHMT2-218ENST00000555213 LINC00643Q86TS7 51 aa6.19□□□□□ -1.42
SHMT2-218ENST00000555213 IGLV7-46A0A075B6I9 117 aa6.18□□□□□ -1.42
SHMT2-218ENST00000555213 LINC00472Q9H8W2 130 aa6.18□□□□□ -1.42
SHMT2-218ENST00000555213 NREPQ16612 68 aa6.17□□□□□ -1.42
SHMT2-218ENST00000555213 Q96NJ1 140 aa6.17□□□□□ -1.42
SHMT2-218ENST00000555213 SS18L2Q9UHA2 77 aa6.17□□□□□ -1.42
SHMT2-218ENST00000555213 UBL5Q9BZL1 73 aa6.16□□□□□ -1.42
SHMT2-218ENST00000555213 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
SHMT2-218ENST00000555213 IGKV3D-7A0A0C4DH55 119 aa6.15□□□□□ -1.42
SHMT2-218ENST00000555213 SIGMAR1Q99720 223 aa6.15□□□□□ -1.42
SHMT2-218ENST00000555213 DSCR10P59022 87 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms