RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 B5MCH6 92 aa8.54□□□□□ -1.04
SHMT2-217ENST00000555116 C6orf99Q4VX62 202 aa8.54□□□□□ -1.04
SHMT2-217ENST00000555116 SVIPQ8NHG7 77 aa8.54□□□□□ -1.04
SHMT2-217ENST00000555116 TRBV7-7A0A0K0K1E9 115 aa8.53□□□□□ -1.04
SHMT2-217ENST00000555116 TRBV10-3A0A0K0K1G6 114 aa8.53□□□□□ -1.04
SHMT2-217ENST00000555116 A0A1B0GX51 115 aa8.53□□□□□ -1.04
SHMT2-217ENST00000555116 UBE2AP49459 152 aa8.53□□□□□ -1.04
SHMT2-217ENST00000555116 PRYO14603 147 aa8.53□□□□□ -1.04
SHMT2-217ENST00000555116 FAM19A1Q7Z5A9 133 aa8.53□□□□□ -1.04
SHMT2-217ENST00000555116 KCNQ1DNQ9H478 68 aa8.53□□□□□ -1.04
SHMT2-217ENST00000555116 PRLHP81277 87 aa8.52□□□□□ -1.05
SHMT2-217ENST00000555116 SS18L2Q9UHA2 77 aa8.51□□□□□ -1.05
SHMT2-217ENST00000555116 SPRR1AP35321 89 aa8.51□□□□□ -1.05
SHMT2-217ENST00000555116 PRR26Q8N8Z3 221 aa8.5□□□□□ -1.05
SHMT2-217ENST00000555116 ORMDL1Q9P0S3 153 aa8.5□□□□□ -1.05
SHMT2-217ENST00000555116 KRTAP4-16G5E9R7 235 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-217ENST00000555116 LINC00575Q6W349 94 aa8.49□□□□□ -1.05
SHMT2-217ENST00000555116 LINC00643Q86TS7 51 aa8.49□□□□□ -1.05
SHMT2-217ENST00000555116 TRAV23DV6A0A075B6W5 121 aa8.49□□□□□ -1.05
SHMT2-217ENST00000555116 CCDC179H3BU77 68 aa8.49□□□□□ -1.05
SHMT2-217ENST00000555116 OBSCN-AS1Q96MR7 158 aa8.47□□□□□ -1.05
SHMT2-217ENST00000555116 ZNF73O43830 326 aaPredicted RBP8.45□□□□□ -1.06
SHMT2-217ENST00000555116 ETDCA0A1B0GVM5 59 aa8.45□□□□□ -1.06
SHMT2-217ENST00000555116 hADV29S1A0JD25 119 aa8.45□□□□□ -1.06
SHMT2-217ENST00000555116 TRBV7-6A0A0J9YX20 115 aa8.44□□□□□ -1.06
SHMT2-217ENST00000555116 TMEM256-PLSCR3K7ERE1 68 aa8.44□□□□□ -1.06
SHMT2-217ENST00000555116 HIGD2AQ9BW72 106 aa8.44□□□□□ -1.06
SHMT2-217ENST00000555116 ANAPC11Q9NYG5 84 aa8.43□□□□□ -1.06
SHMT2-217ENST00000555116 A0A087X002 238 aa8.42□□□□□ -1.06
SHMT2-217ENST00000555116 COX7BP24311 80 aa8.42□□□□□ -1.06
SHMT2-217ENST00000555116 ELOF1P60002 83 aaKnown RBP8.42□□□□□ -1.06
SHMT2-217ENST00000555116 C14orf132Q9NPU4 83 aa8.42□□□□□ -1.06
SHMT2-217ENST00000555116 FAM236AA0A1B0GUQ0 79 aa8.41□□□□□ -1.06
SHMT2-217ENST00000555116 FAM236BA0A1B0GV22 79 aa8.41□□□□□ -1.06
SHMT2-217ENST00000555116 SMCR5Q8TEV8 140 aa8.41□□□□□ -1.06
SHMT2-217ENST00000555116 GAGE2AQ6NT46 116 aa8.4□□□□□ -1.06
SHMT2-217ENST00000555116 CRYGAP11844 174 aa8.4□□□□□ -1.07
SHMT2-217ENST00000555116 FAM229BQ4G0N7 80 aa8.4□□□□□ -1.07
SHMT2-217ENST00000555116 JMJD7-PLA2G4BH0Y9G9 81 aa8.39□□□□□ -1.07
SHMT2-217ENST00000555116 Q6ZRX8 168 aa8.39□□□□□ -1.07
SHMT2-217ENST00000555116 SPRR4Q96PI1 79 aa8.39□□□□□ -1.07
SHMT2-217ENST00000555116 KRTAP13-2Q52LG2 175 aa8.38□□□□□ -1.07
SHMT2-217ENST00000555116 Q6ZQY7 126 aa8.38□□□□□ -1.07
SHMT2-217ENST00000555116 Q9BRP9 147 aa8.38□□□□□ -1.07
SHMT2-217ENST00000555116 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
SHMT2-217ENST00000555116 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
SHMT2-217ENST00000555116 UQCRQO14949 82 aa8.37□□□□□ -1.07
SHMT2-217ENST00000555116 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
SHMT2-217ENST00000555116 C3orf22Q8N5N4 141 aa8.37□□□□□ -1.07
SHMT2-217ENST00000555116 H3BQ85 93 aa8.36□□□□□ -1.07
SHMT2-217ENST00000555116 LCE2DQ5TA82 110 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-217ENST00000555116 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-217ENST00000555116 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-217ENST00000555116 C9orf153Q5TBE3 101 aa8.35□□□□□ -1.07
SHMT2-217ENST00000555116 TYMSOSQ8TAI1 123 aa8.35□□□□□ -1.07
SHMT2-217ENST00000555116 ATOX1O00244 68 aa8.34□□□□□ -1.07
SHMT2-217ENST00000555116 CCKP06307 115 aa8.34□□□□□ -1.07
SHMT2-217ENST00000555116 Q6JHZ5 121 aa8.33□□□□□ -1.08
SHMT2-217ENST00000555116 SMIM20Q8N5G0 67 aa8.33□□□□□ -1.08
SHMT2-217ENST00000555116 LAMTOR3Q9UHA4 124 aa8.33□□□□□ -1.08
SHMT2-217ENST00000555116 HMCN2Q8NDA2 5059 aa8.33□□□□□ -1.08
SHMT2-217ENST00000555116 LINC00483Q53H64 154 aa8.32□□□□□ -1.08
SHMT2-217ENST00000555116 GHRHP01286 108 aa8.32□□□□□ -1.08
SHMT2-217ENST00000555116 COX7CP15954 63 aa8.32□□□□□ -1.08
SHMT2-217ENST00000555116 RBM3P98179 157 aaKnown RBP8.32□□□□□ -1.08
SHMT2-217ENST00000555116 LINC00846Q9NV44 126 aa8.3□□□□□ -1.08
SHMT2-217ENST00000555116 HIST1H4AP62805 103 aaKnown RBP8.3□□□□□ -1.08
SHMT2-217ENST00000555116 LOC110117498A0A087WWA1 95 aa8.29□□□□□ -1.08
SHMT2-217ENST00000555116 Q6ZQT0 140 aa8.28□□□□□ -1.08
SHMT2-217ENST00000555116 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
SHMT2-217ENST00000555116 ST20-AS1Q8NBB2 130 aa8.28□□□□□ -1.08
SHMT2-217ENST00000555116 LINC00304Q8N9R0 145 aa8.26□□□□□ -1.09
SHMT2-217ENST00000555116 DSCR8Q96T75 97 aa8.26□□□□□ -1.09
SHMT2-217ENST00000555116 PDE6GP18545 87 aa8.25□□□□□ -1.09
SHMT2-217ENST00000555116 ATP5EP2Q5VTU8 51 aa8.25□□□□□ -1.09
SHMT2-217ENST00000555116 IGKV3D-7A0A0C4DH55 119 aa8.23□□□□□ -1.09
SHMT2-217ENST00000555116 TRBV7-4A0A0J9YYF1 115 aa8.23□□□□□ -1.09
SHMT2-217ENST00000555116 SPRR1BP22528 89 aa8.23□□□□□ -1.09
SHMT2-217ENST00000555116 LINC01547P58512 204 aaPredicted RBP8.22□□□□□ -1.09
SHMT2-217ENST00000555116 Q8N377 158 aa8.22□□□□□ -1.09
SHMT2-217ENST00000555116 SERP2Q8N6R1 65 aa8.22□□□□□ -1.09
SHMT2-217ENST00000555116 Q8NBF4 154 aa8.21□□□□□ -1.09
SHMT2-217ENST00000555116 DEFB105AQ8NG35 78 aa8.21□□□□□ -1.09
SHMT2-217ENST00000555116 IGLV9-49A0A0B4J1Y8 123 aa8.21□□□□□ -1.1
SHMT2-217ENST00000555116 MOBPQ13875 183 aa8.21□□□□□ -1.1
SHMT2-217ENST00000555116 J3KT08 172 aa8.2□□□□□ -1.1
SHMT2-217ENST00000555116 RPS28P62857 69 aaKnown RBP8.19□□□□□ -1.1
SHMT2-217ENST00000555116 SPAG11AQ6PDA7 123 aa8.19□□□□□ -1.1
SHMT2-217ENST00000555116 SSBP3-AS1Q7Z2R9 100 aa8.19□□□□□ -1.1
SHMT2-217ENST00000555116 UBL5Q9BZL1 73 aa8.19□□□□□ -1.1
SHMT2-217ENST00000555116 IGLV5-48A0A075B6I7 105 aa8.18□□□□□ -1.1
SHMT2-217ENST00000555116 TMEM258P61165 79 aa8.17□□□□□ -1.1
SHMT2-217ENST00000555116 PRR4Q16378 134 aa8.15□□□□□ -1.1
SHMT2-217ENST00000555116 LRP2P98164 4655 aa8.15□□□□□ -1.1
SHMT2-217ENST00000555116 A0A087WVE0 104 aa8.14□□□□□ -1.11
SHMT2-217ENST00000555116 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
SHMT2-217ENST00000555116 Q6ZVQ6 151 aa8.13□□□□□ -1.11
SHMT2-217ENST00000555116 RETNLBQ9BQ08 111 aa8.13□□□□□ -1.11
SHMT2-217ENST00000555116 SPINK1P00995 79 aa8.13□□□□□ -1.11
SHMT2-217ENST00000555116 RPS29P62273 56 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms