RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 LINC00336Q6ZUF6 198 aa6.06□□□□□ -1.44
SYNE2-213ENST00000554805 A0A1B0GW54 56 aa6.06□□□□□ -1.44
SYNE2-213ENST00000554805 TNP2Q05952 138 aa6.06□□□□□ -1.44
SYNE2-213ENST00000554805 A0A087WSZ3 146 aa6.06□□□□□ -1.44
SYNE2-213ENST00000554805 DSCR10P59022 87 aa6.06□□□□□ -1.44
SYNE2-213ENST00000554805 UBE2AP49459 152 aa6.05□□□□□ -1.44
SYNE2-213ENST00000554805 BRK1Q8WUW1 75 aa6.05□□□□□ -1.44
SYNE2-213ENST00000554805 DNAH1Q9P2D7 4330 aa6.05□□□□□ -1.44
SYNE2-213ENST00000554805 A0A096LNI7 61 aa6.05□□□□□ -1.44
SYNE2-213ENST00000554805 FAM229BQ4G0N7 80 aa6.04□□□□□ -1.44
SYNE2-213ENST00000554805 HCG22E2RYF7 251 aa6.04□□□□□ -1.44
SYNE2-213ENST00000554805 SPRR4Q96PI1 79 aa6.04□□□□□ -1.44
SYNE2-213ENST00000554805 K7EIL1 84 aa6.04□□□□□ -1.44
SYNE2-213ENST00000554805 IGFL1Q6UW32 110 aa6.04□□□□□ -1.44
SYNE2-213ENST00000554805 RPL37AP61513 92 aaKnown RBP6.02□□□□□ -1.44
SYNE2-213ENST00000554805 CHTF8P0CG12 524 aa6.01□□□□□ -1.45
SYNE2-213ENST00000554805 PHF5AQ7RTV0 110 aaKnown RBP6.01□□□□□ -1.45
SYNE2-213ENST00000554805 MP68P56378 58 aa6□□□□□ -1.45
SYNE2-213ENST00000554805 C16orf90A8MZG2 172 aa6□□□□□ -1.45
SYNE2-213ENST00000554805 LYSTQ99698 3801 aa5.99□□□□□ -1.45
SYNE2-213ENST00000554805 LINC00208Q96KT6 92 aa5.98□□□□□ -1.45
SYNE2-213ENST00000554805 KRTAP1-5Q9BYS1 174 aa5.98□□□□□ -1.45
SYNE2-213ENST00000554805 C1orf64Q8NEQ6 169 aa5.97□□□□□ -1.45
SYNE2-213ENST00000554805 H0Y9J4 135 aa5.96□□□□□ -1.45
SYNE2-213ENST00000554805 CASC2Q6XLA1 102 aa5.95□□□□□ -1.46
SYNE2-213ENST00000554805 C14orf177Q52M58 125 aa5.95□□□□□ -1.46
SYNE2-213ENST00000554805 hDV103S1A0JD37 113 aa5.95□□□□□ -1.46
SYNE2-213ENST00000554805 C1orf195Q5TG92 126 aa5.95□□□□□ -1.46
SYNE2-213ENST00000554805 B9D2Q9BPU9 175 aa5.95□□□□□ -1.46
SYNE2-213ENST00000554805 CNBPP62633 177 aaKnown RBP5.93□□□□□ -1.46
SYNE2-213ENST00000554805 KRTAP11-1Q8IUC1 163 aa5.93□□□□□ -1.46
SYNE2-213ENST00000554805 H0Y9P7 68 aa5.93□□□□□ -1.46
SYNE2-213ENST00000554805 PSPHP1O15172 72 aa5.93□□□□□ -1.46
SYNE2-213ENST00000554805 NDUFB1O75438 58 aa5.93□□□□□ -1.46
SYNE2-213ENST00000554805 ZCCHC13Q8WW36 166 aaKnown RBP5.93□□□□□ -1.46
SYNE2-213ENST00000554805 IGLV9-49A0A0B4J1Y8 123 aa5.91□□□□□ -1.46
SYNE2-213ENST00000554805 IGLV8-61A0A075B6I0 122 aa5.91□□□□□ -1.46
SYNE2-213ENST00000554805 PRR15Q8IV56 129 aa5.91□□□□□ -1.46
SYNE2-213ENST00000554805 DNHD1Q96M86 4753 aa5.89□□□□□ -1.47
SYNE2-213ENST00000554805 TRAV22A0A0B4J277 110 aa5.89□□□□□ -1.47
SYNE2-213ENST00000554805 A8MWP4 228 aa5.89□□□□□ -1.47
SYNE2-213ENST00000554805 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
SYNE2-213ENST00000554805 C9orf163Q8N9P6 203 aa5.88□□□□□ -1.47
SYNE2-213ENST00000554805 APLNQ9ULZ1 77 aa5.88□□□□□ -1.47
SYNE2-213ENST00000554805 C4orf48Q5BLP8 95 aa5.87□□□□□ -1.47
SYNE2-213ENST00000554805 NDUFS5O43920 106 aa5.87□□□□□ -1.47
SYNE2-213ENST00000554805 MEGF8Q7Z7M0 2845 aa5.87□□□□□ -1.47
SYNE2-213ENST00000554805 KRTAP29-1A8MX34 341 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-213ENST00000554805 CYP4F30PQ9H0H9 118 aa5.86□□□□□ -1.47
SYNE2-213ENST00000554805 LINC00472Q9H8W2 130 aa5.86□□□□□ -1.47
SYNE2-213ENST00000554805 PANO1I0J062 215 aa5.85□□□□□ -1.47
SYNE2-213ENST00000554805 SPRR1BP22528 89 aa5.85□□□□□ -1.47
SYNE2-213ENST00000554805 CDK2AP2O75956 126 aa5.85□□□□□ -1.47
SYNE2-213ENST00000554805 PCOTHQ58A44 107 aa5.85□□□□□ -1.47
SYNE2-213ENST00000554805 NBDYA0A0U1RRE5 68 aa5.84□□□□□ -1.47
SYNE2-213ENST00000554805 A8MUN3 132 aa5.84□□□□□ -1.47
SYNE2-213ENST00000554805 Q1T7F1 81 aa5.84□□□□□ -1.47
SYNE2-213ENST00000554805 IGHV6-1A0A0B4J1U7 121 aa5.82□□□□□ -1.48
SYNE2-213ENST00000554805 H3BPC8 53 aa5.82□□□□□ -1.48
SYNE2-213ENST00000554805 CMYA5Q8N3K9 4069 aa5.82□□□□□ -1.48
SYNE2-213ENST00000554805 FBN3Q75N90 2809 aa5.82□□□□□ -1.48
SYNE2-213ENST00000554805 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-213ENST00000554805 ALMS1Q8TCU4 4167 aa5.81□□□□□ -1.48
SYNE2-213ENST00000554805 MMP24-AS1A0A0U1RRL7 71 aa5.81□□□□□ -1.48
SYNE2-213ENST00000554805 ANAPC11Q9NYG5 84 aa5.81□□□□□ -1.48
SYNE2-213ENST00000554805 MOBPQ13875 183 aa5.8□□□□□ -1.48
SYNE2-213ENST00000554805 A0A087X002 238 aa5.8□□□□□ -1.48
SYNE2-213ENST00000554805 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
SYNE2-213ENST00000554805 LY6G6CO95867 125 aa5.79□□□□□ -1.48
SYNE2-213ENST00000554805 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
SYNE2-213ENST00000554805 DNAH3Q8TD57 4116 aa5.79□□□□□ -1.48
SYNE2-213ENST00000554805 HUWE1Q7Z6Z7 4374 aaKnown RBP5.79□□□□□ -1.48
SYNE2-213ENST00000554805 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
SYNE2-213ENST00000554805 SPINK6Q6UWN8 80 aa5.79□□□□□ -1.48
SYNE2-213ENST00000554805 SPANXA2-OT1Q8N9U9 137 aa5.79□□□□□ -1.48
SYNE2-213ENST00000554805 CD164Q04900 197 aa5.78□□□□□ -1.48
SYNE2-213ENST00000554805 NUPR2A6NF83 97 aa5.78□□□□□ -1.48
SYNE2-213ENST00000554805 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
SYNE2-213ENST00000554805 C8orf17Q9NRJ1 99 aa5.78□□□□□ -1.48
SYNE2-213ENST00000554805 DYNC2H1Q8NCM8 4307 aaKnown RBP5.77□□□□□ -1.48
SYNE2-213ENST00000554805 ZNF706Q9Y5V0 76 aaPredicted RBP5.77□□□□□ -1.49
SYNE2-213ENST00000554805 COA5Q86WW8 74 aa5.76□□□□□ -1.49
SYNE2-213ENST00000554805 SPACA4Q8TDM5 124 aa5.76□□□□□ -1.49
SYNE2-213ENST00000554805 KRTAP13-1Q8IUC0 172 aa5.75□□□□□ -1.49
SYNE2-213ENST00000554805 TP53AIP1Q9HCN2 124 aa5.75□□□□□ -1.49
SYNE2-213ENST00000554805 PSORS1C2Q9UIG4 136 aa5.75□□□□□ -1.49
SYNE2-213ENST00000554805 PRKDCP78527 4128 aaKnown RBP5.74□□□□□ -1.49
SYNE2-213ENST00000554805 DNAH7Q8WXX0 4024 aa5.74□□□□□ -1.49
SYNE2-213ENST00000554805 A0A087WTM6 91 aa5.74□□□□□ -1.49
SYNE2-213ENST00000554805 Q8N9P0 234 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-213ENST00000554805 LIMD2Q9BT23 127 aa5.74□□□□□ -1.49
SYNE2-213ENST00000554805 RTL8CO15255 209 aa5.74□□□□□ -1.49
SYNE2-213ENST00000554805 Q6ZRN7 208 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-213ENST00000554805 A0A1B0GVX0 72 aa5.73□□□□□ -1.49
SYNE2-213ENST00000554805 Q5VV11 94 aa5.73□□□□□ -1.49
SYNE2-213ENST00000554805 Q96NJ1 140 aa5.72□□□□□ -1.49
SYNE2-213ENST00000554805 IGLV7-46A0A075B6I9 117 aa5.72□□□□□ -1.49
SYNE2-213ENST00000554805 A6NED7 52 aa5.72□□□□□ -1.49
SYNE2-213ENST00000554805 CIRBP-AS1Q8TBR5 109 aa5.72□□□□□ -1.49
SYNE2-213ENST00000554805 MRPL34Q9BQ48 92 aaKnown RBP5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms