RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 FAM236BA0A1B0GV22 79 aa7.59□□□□□ -1.19
RIPK3-204ENST00000554756 HSPG2P98160 4391 aa7.59□□□□□ -1.19
RIPK3-204ENST00000554756 FAM168BA1KXE4 195 aa7.59□□□□□ -1.2
RIPK3-204ENST00000554756 PLA2G1BP04054 148 aaKnown RBP7.58□□□□□ -1.2
RIPK3-204ENST00000554756 HIST1H4AP62805 103 aaKnown RBP7.58□□□□□ -1.2
RIPK3-204ENST00000554756 Q6ZRX8 168 aa7.58□□□□□ -1.2
RIPK3-204ENST00000554756 MRPL55Q7Z7F7 128 aaKnown RBP7.58□□□□□ -1.2
RIPK3-204ENST00000554756 DNAH8Q96JB1 4490 aa7.57□□□□□ -1.2
RIPK3-204ENST00000554756 KRTAP4-16G5E9R7 235 aaPredicted RBP7.57□□□□□ -1.2
RIPK3-204ENST00000554756 RPL37AP61513 92 aaKnown RBP7.57□□□□□ -1.2
RIPK3-204ENST00000554756 FAM19A5Q7Z5A7 132 aaPredicted RBP7.57□□□□□ -1.2
RIPK3-204ENST00000554756 ETDCA0A1B0GVM5 59 aa7.56□□□□□ -1.2
RIPK3-204ENST00000554756 B5MCH6 92 aa7.56□□□□□ -1.2
RIPK3-204ENST00000554756 ATOX1O00244 68 aa7.56□□□□□ -1.2
RIPK3-204ENST00000554756 PHF5AQ7RTV0 110 aaKnown RBP7.56□□□□□ -1.2
RIPK3-204ENST00000554756 A0A1B0GW54 56 aa7.55□□□□□ -1.2
RIPK3-204ENST00000554756 KRTAP7-1Q8IUC3 87 aa7.54□□□□□ -1.2
RIPK3-204ENST00000554756 IGKV3D-7A0A0C4DH55 119 aa7.54□□□□□ -1.2
RIPK3-204ENST00000554756 KRTAP10-4P60372 401 aaPredicted RBP7.53□□□□□ -1.2
RIPK3-204ENST00000554756 IGLV5-48A0A075B6I7 105 aa7.52□□□□□ -1.21
RIPK3-204ENST00000554756 CXCL6P80162 114 aa7.51□□□□□ -1.21
RIPK3-204ENST00000554756 REG3GQ6UW15 175 aa7.51□□□□□ -1.21
RIPK3-204ENST00000554756 RPL37AP8A6NKH3 93 aa7.51□□□□□ -1.21
RIPK3-204ENST00000554756 Q6ZVQ6 151 aa7.5□□□□□ -1.21
RIPK3-204ENST00000554756 UQCRQO14949 82 aa7.49□□□□□ -1.21
RIPK3-204ENST00000554756 KRTAP11-1Q8IUC1 163 aa7.49□□□□□ -1.21
RIPK3-204ENST00000554756 Q8N377 158 aa7.49□□□□□ -1.21
RIPK3-204ENST00000554756 Q9BRP9 147 aa7.49□□□□□ -1.21
RIPK3-204ENST00000554756 BCE1O60756 84 aa7.48□□□□□ -1.21
RIPK3-204ENST00000554756 LINC01547P58512 204 aaPredicted RBP7.48□□□□□ -1.21
RIPK3-204ENST00000554756 UBE2BP63146 152 aa7.48□□□□□ -1.21
RIPK3-204ENST00000554756 FAT1Q14517 4588 aa7.48□□□□□ -1.21
RIPK3-204ENST00000554756 CCDC179H3BU77 68 aa7.48□□□□□ -1.21
RIPK3-204ENST00000554756 C3orf22Q8N5N4 141 aa7.47□□□□□ -1.21
RIPK3-204ENST00000554756 PSORS1C2Q9UIG4 136 aa7.47□□□□□ -1.21
RIPK3-204ENST00000554756 COX7CP15954 63 aa7.46□□□□□ -1.21
RIPK3-204ENST00000554756 H0Y9J4 135 aa7.45□□□□□ -1.22
RIPK3-204ENST00000554756 C1orf137Q5JT78 98 aa7.45□□□□□ -1.22
RIPK3-204ENST00000554756 SERP2Q8N6R1 65 aa7.44□□□□□ -1.22
RIPK3-204ENST00000554756 A0A087WVE0 104 aa7.43□□□□□ -1.22
RIPK3-204ENST00000554756 DEFB105AQ8NG35 78 aa7.43□□□□□ -1.22
RIPK3-204ENST00000554756 SMIM20Q8N5G0 67 aa7.43□□□□□ -1.22
RIPK3-204ENST00000554756 CRYGAP11844 174 aa7.41□□□□□ -1.22
RIPK3-204ENST00000554756 C9orf153Q5TBE3 101 aa7.41□□□□□ -1.22
RIPK3-204ENST00000554756 FAM19A1Q7Z5A9 133 aa7.41□□□□□ -1.22
RIPK3-204ENST00000554756 F8WEM9 126 aa7.41□□□□□ -1.22
RIPK3-204ENST00000554756 IGLV7-43P04211 117 aa7.4□□□□□ -1.23
RIPK3-204ENST00000554756 NREPQ16612 68 aa7.4□□□□□ -1.23
RIPK3-204ENST00000554756 Q8NBF4 154 aa7.4□□□□□ -1.23
RIPK3-204ENST00000554756 SPRR4Q96PI1 79 aa7.4□□□□□ -1.23
RIPK3-204ENST00000554756 ERC2-IT1O76042 136 aa7.39□□□□□ -1.23
RIPK3-204ENST00000554756 ST20-AS1Q8NBB2 130 aa7.39□□□□□ -1.23
RIPK3-204ENST00000554756 HERC1Q15751 4861 aa7.39□□□□□ -1.23
RIPK3-204ENST00000554756 IGLV8-61A0A075B6I0 122 aa7.38□□□□□ -1.23
RIPK3-204ENST00000554756 SPINK6Q6UWN8 80 aa7.38□□□□□ -1.23
RIPK3-204ENST00000554756 SPRR1BP22528 89 aa7.37□□□□□ -1.23
RIPK3-204ENST00000554756 SMIM29Q86T20 159 aa7.37□□□□□ -1.23
RIPK3-204ENST00000554756 SRRM2Q9UQ35 2752 aaKnown RBP7.36□□□□□ -1.23
RIPK3-204ENST00000554756 DMBT1Q9UGM3 2413 aaPredicted RBP7.36□□□□□ -1.23
RIPK3-204ENST00000554756 A0A1W2PNM2 257 aa7.36□□□□□ -1.23
RIPK3-204ENST00000554756 VPS13BQ7Z7G8 4022 aa7.35□□□□□ -1.23
RIPK3-204ENST00000554756 TRAV7A0A075B6U4 112 aa7.35□□□□□ -1.23
RIPK3-204ENST00000554756 BPY2O14599 106 aa7.35□□□□□ -1.23
RIPK3-204ENST00000554756 PRLHP81277 87 aa7.35□□□□□ -1.23
RIPK3-204ENST00000554756 KRTAP29-1A8MX34 341 aaPredicted RBP7.33□□□□□ -1.24
RIPK3-204ENST00000554756 J3QL48 77 aa7.33□□□□□ -1.24
RIPK3-204ENST00000554756 HIGD2AQ9BW72 106 aa7.33□□□□□ -1.24
RIPK3-204ENST00000554756 ZNF861PO60384 105 aa7.33□□□□□ -1.24
RIPK3-204ENST00000554756 OXTP01178 125 aa7.33□□□□□ -1.24
RIPK3-204ENST00000554756 FLG2Q5D862 2391 aaPredicted RBP7.33□□□□□ -1.24
RIPK3-204ENST00000554756 UBE2AP49459 152 aa7.32□□□□□ -1.24
RIPK3-204ENST00000554756 SS18L2Q9UHA2 77 aa7.32□□□□□ -1.24
RIPK3-204ENST00000554756 IGKV4-1P06312 121 aa7.31□□□□□ -1.24
RIPK3-204ENST00000554756 KRTAP13-1Q8IUC0 172 aa7.3□□□□□ -1.24
RIPK3-204ENST00000554756 IGFL1Q6UW32 110 aa7.29□□□□□ -1.24
RIPK3-204ENST00000554756 TMEM258P61165 79 aa7.28□□□□□ -1.24
RIPK3-204ENST00000554756 MT1HL1P0DM35 61 aa7.25□□□□□ -1.25
RIPK3-204ENST00000554756 ZNF706Q9Y5V0 76 aaPredicted RBP7.25□□□□□ -1.25
RIPK3-204ENST00000554756 KLKP1Q107X0 134 aa7.24□□□□□ -1.25
RIPK3-204ENST00000554756 PKHD1L1Q86WI1 4243 aa7.23□□□□□ -1.25
RIPK3-204ENST00000554756 KRTAP1-4P0C5Y4 121 aa7.23□□□□□ -1.25
RIPK3-204ENST00000554756 PRR26Q8N8Z3 221 aa7.23□□□□□ -1.25
RIPK3-204ENST00000554756 NDUFC1O43677 76 aa7.22□□□□□ -1.25
RIPK3-204ENST00000554756 LINC00483Q53H64 154 aa7.22□□□□□ -1.25
RIPK3-204ENST00000554756 ANAPC11Q9NYG5 84 aa7.22□□□□□ -1.25
RIPK3-204ENST00000554756 DSCR10P59022 87 aa7.21□□□□□ -1.25
RIPK3-204ENST00000554756 KRTAP10-8P60410 259 aa7.21□□□□□ -1.25
RIPK3-204ENST00000554756 C20orf197Q8N268 126 aa7.21□□□□□ -1.25
RIPK3-204ENST00000554756 Q8N9L7 120 aa7.21□□□□□ -1.25
RIPK3-204ENST00000554756 MYCBP2O75592 4640 aa7.21□□□□□ -1.26
RIPK3-204ENST00000554756 A0A087WSZ3 146 aa7.2□□□□□ -1.26
RIPK3-204ENST00000554756 OCR1Q9BZK8 76 aa7.2□□□□□ -1.26
RIPK3-204ENST00000554756 LRP1Q07954 4544 aaKnown RBP7.19□□□□□ -1.26
RIPK3-204ENST00000554756 RPS28P62857 69 aaKnown RBP7.19□□□□□ -1.26
RIPK3-204ENST00000554756 CYSTM1Q9H1C7 97 aa7.18□□□□□ -1.26
RIPK3-204ENST00000554756 J3KT08 172 aa7.17□□□□□ -1.26
RIPK3-204ENST00000554756 FAT3Q8TDW7 4589 aa7.16□□□□□ -1.26
RIPK3-204ENST00000554756 A0A087X002 238 aa7.16□□□□□ -1.26
RIPK3-204ENST00000554756 K7EQZ3 153 aa7.16□□□□□ -1.26
RIPK3-204ENST00000554756 HCG22E2RYF7 251 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms