RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 KRTAP7-1Q8IUC3 87 aa10.82□□□□□ -0.68
PPP4R3A-202ENST00000554390 C11orf45Q8TAV5 145 aa10.82□□□□□ -0.68
PPP4R3A-202ENST00000554390 CMYA5Q8N3K9 4069 aa10.81□□□□□ -0.68
PPP4R3A-202ENST00000554390 KRTAP4-16G5E9R7 235 aaPredicted RBP10.81□□□□□ -0.68
PPP4R3A-202ENST00000554390 Q5VV11 94 aa10.8□□□□□ -0.68
PPP4R3A-202ENST00000554390 WFDC13Q8IUB5 93 aa10.8□□□□□ -0.68
PPP4R3A-202ENST00000554390 UBE2BP63146 152 aa10.8□□□□□ -0.68
PPP4R3A-202ENST00000554390 B9D2Q9BPU9 175 aa10.79□□□□□ -0.68
PPP4R3A-202ENST00000554390 IGKV2-24A0A0C4DH68 120 aa10.78□□□□□ -0.68
PPP4R3A-202ENST00000554390 MP68P56378 58 aa10.78□□□□□ -0.68
PPP4R3A-202ENST00000554390 LINC01556Q5JQF7 62 aa10.77□□□□□ -0.68
PPP4R3A-202ENST00000554390 LINC00208Q96KT6 92 aa10.77□□□□□ -0.68
PPP4R3A-202ENST00000554390 IGLV1-50A0A075B6I6 118 aa10.77□□□□□ -0.69
PPP4R3A-202ENST00000554390 H3BNG1 76 aa10.77□□□□□ -0.69
PPP4R3A-202ENST00000554390 SPRR1AP35321 89 aa10.75□□□□□ -0.69
PPP4R3A-202ENST00000554390 LINC00588Q9Y4M8 146 aa10.75□□□□□ -0.69
PPP4R3A-202ENST00000554390 PRLHP81277 87 aa10.74□□□□□ -0.69
PPP4R3A-202ENST00000554390 LINC00476Q8WZB0 136 aa10.74□□□□□ -0.69
PPP4R3A-202ENST00000554390 CHKB-CPT1BH3BT56 60 aa10.73□□□□□ -0.69
PPP4R3A-202ENST00000554390 Q8N9P0 234 aaPredicted RBP10.72□□□□□ -0.69
PPP4R3A-202ENST00000554390 CD164Q04900 197 aa10.72□□□□□ -0.69
PPP4R3A-202ENST00000554390 PLA2G2DQ9UNK4 145 aa10.71□□□□□ -0.7
PPP4R3A-202ENST00000554390 UBE2AP49459 152 aa10.7□□□□□ -0.7
PPP4R3A-202ENST00000554390 A0A096LNI7 61 aa10.69□□□□□ -0.7
PPP4R3A-202ENST00000554390 C16orf90A8MZG2 172 aa10.69□□□□□ -0.7
PPP4R3A-202ENST00000554390 RPL37AP61513 92 aaKnown RBP10.69□□□□□ -0.7
PPP4R3A-202ENST00000554390 IGFL1Q6UW32 110 aa10.69□□□□□ -0.7
PPP4R3A-202ENST00000554390 MRPL55Q7Z7F7 128 aaKnown RBP10.68□□□□□ -0.7
PPP4R3A-202ENST00000554390 PRR15LQ9BU68 103 aa10.68□□□□□ -0.7
PPP4R3A-202ENST00000554390 LIMD2Q9BT23 127 aa10.68□□□□□ -0.7
PPP4R3A-202ENST00000554390 A0A087WSZ3 146 aa10.68□□□□□ -0.7
PPP4R3A-202ENST00000554390 TLX1NBP0CAT3 122 aa10.68□□□□□ -0.7
PPP4R3A-202ENST00000554390 H0Y9P7 68 aa10.67□□□□□ -0.7
PPP4R3A-202ENST00000554390 SPANXA2-OT1Q8N9U9 137 aa10.67□□□□□ -0.7
PPP4R3A-202ENST00000554390 DNAH9Q9NYC9 4486 aa10.67□□□□□ -0.7
PPP4R3A-202ENST00000554390 IGLV5-37A0A075B6J1 123 aa10.67□□□□□ -0.7
PPP4R3A-202ENST00000554390 KRTAP24-1Q3LI83 254 aa10.67□□□□□ -0.7
PPP4R3A-202ENST00000554390 DNAH10OSP0CZ25 163 aa10.66□□□□□ -0.7
PPP4R3A-202ENST00000554390 KRTAP29-1A8MX34 341 aaPredicted RBP10.65□□□□□ -0.7
PPP4R3A-202ENST00000554390 SPTSSBQ8NFR3 76 aa10.65□□□□□ -0.7
PPP4R3A-202ENST00000554390 DNAH1Q9P2D7 4330 aa10.64□□□□□ -0.71
PPP4R3A-202ENST00000554390 CHTF8P0CG12 524 aa10.64□□□□□ -0.71
PPP4R3A-202ENST00000554390 HUWE1Q7Z6Z7 4374 aaKnown RBP10.64□□□□□ -0.71
PPP4R3A-202ENST00000554390 DNAH7Q8WXX0 4024 aa10.63□□□□□ -0.71
PPP4R3A-202ENST00000554390 CASC2Q6XLA1 102 aa10.62□□□□□ -0.71
PPP4R3A-202ENST00000554390 KTN1-AS1Q86SY8 53 aa10.62□□□□□ -0.71
PPP4R3A-202ENST00000554390 LCA10Q71F78 164 aa10.61□□□□□ -0.71
PPP4R3A-202ENST00000554390 KRTAP1-5Q9BYS1 174 aa10.61□□□□□ -0.71
PPP4R3A-202ENST00000554390 REG3GQ6UW15 175 aa10.61□□□□□ -0.71
PPP4R3A-202ENST00000554390 H3BPC8 53 aa10.6□□□□□ -0.71
PPP4R3A-202ENST00000554390 KRTAP11-1Q8IUC1 163 aa10.6□□□□□ -0.71
PPP4R3A-202ENST00000554390 C9orf163Q8N9P6 203 aa10.58□□□□□ -0.72
PPP4R3A-202ENST00000554390 A6NED7 52 aa10.57□□□□□ -0.72
PPP4R3A-202ENST00000554390 CNBPP62633 177 aaKnown RBP10.57□□□□□ -0.72
PPP4R3A-202ENST00000554390 Q75L30 129 aa10.56□□□□□ -0.72
PPP4R3A-202ENST00000554390 ATP11AUNQ6ZP68 121 aa10.56□□□□□ -0.72
PPP4R3A-202ENST00000554390 COA5Q86WW8 74 aa10.56□□□□□ -0.72
PPP4R3A-202ENST00000554390 RBM12B-AS1Q9P1G2 102 aa10.56□□□□□ -0.72
PPP4R3A-202ENST00000554390 PHF5AQ7RTV0 110 aaKnown RBP10.55□□□□□ -0.72
PPP4R3A-202ENST00000554390 IGLV8-61A0A075B6I0 122 aa10.53□□□□□ -0.72
PPP4R3A-202ENST00000554390 DNAH3Q8TD57 4116 aa10.53□□□□□ -0.72
PPP4R3A-202ENST00000554390 LOC101927531A0A1B0GV80 90 aa10.53□□□□□ -0.72
PPP4R3A-202ENST00000554390 A8MWP4 228 aa10.5□□□□□ -0.73
PPP4R3A-202ENST00000554390 A6NN06 94 aa10.5□□□□□ -0.73
PPP4R3A-202ENST00000554390 IGLV7-46A0A075B6I9 117 aa10.49□□□□□ -0.73
PPP4R3A-202ENST00000554390 LINC00472Q9H8W2 130 aa10.47□□□□□ -0.73
PPP4R3A-202ENST00000554390 NDUFS5O43920 106 aa10.47□□□□□ -0.73
PPP4R3A-202ENST00000554390 PCOTHQ58A44 107 aa10.46□□□□□ -0.73
PPP4R3A-202ENST00000554390 CDC42SE1Q9NRR8 79 aa10.46□□□□□ -0.73
PPP4R3A-202ENST00000554390 K7EIL1 84 aa10.45□□□□□ -0.74
PPP4R3A-202ENST00000554390 H0Y9J4 135 aa10.44□□□□□ -0.74
PPP4R3A-202ENST00000554390 SPAG11AQ6PDA7 123 aa10.44□□□□□ -0.74
PPP4R3A-202ENST00000554390 PANO1I0J062 215 aa10.43□□□□□ -0.74
PPP4R3A-202ENST00000554390 MMP24-AS1A0A0U1RRL7 71 aa10.41□□□□□ -0.74
PPP4R3A-202ENST00000554390 FRAS1Q86XX4 4008 aa10.41□□□□□ -0.74
PPP4R3A-202ENST00000554390 UBE2DNLQ8IWF7 75 aa10.41□□□□□ -0.74
PPP4R3A-202ENST00000554390 LINC01558Q9Y6Z2 57 aa10.4□□□□□ -0.75
PPP4R3A-202ENST00000554390 MOBPQ13875 183 aa10.39□□□□□ -0.75
PPP4R3A-202ENST00000554390 PLECQ15149 4684 aaKnown RBP10.39□□□□□ -0.75
PPP4R3A-202ENST00000554390 TGP01266 2768 aa10.38□□□□□ -0.75
PPP4R3A-202ENST00000554390 IGLV9-49A0A0B4J1Y8 123 aa10.37□□□□□ -0.75
PPP4R3A-202ENST00000554390 PLAC8Q9NZF1 115 aa10.37□□□□□ -0.75
PPP4R3A-202ENST00000554390 C7orf65Q6ZTY9 151 aa10.36□□□□□ -0.75
PPP4R3A-202ENST00000554390 SPINK7P58062 85 aa10.35□□□□□ -0.75
PPP4R3A-202ENST00000554390 ANAPC11Q9NYG5 84 aa10.35□□□□□ -0.75
PPP4R3A-202ENST00000554390 SPRR1BP22528 89 aa10.32□□□□□ -0.76
PPP4R3A-202ENST00000554390 HRES1P13985 223 aa10.29□□□□□ -0.76
PPP4R3A-202ENST00000554390 TP53AIP1Q9HCN2 124 aa10.29□□□□□ -0.76
PPP4R3A-202ENST00000554390 ASB16-AS1Q495Z4 193 aa10.26□□□□□ -0.77
PPP4R3A-202ENST00000554390 Q6ZR54 194 aa10.26□□□□□ -0.77
PPP4R3A-202ENST00000554390 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.24□□□□□ -0.77
PPP4R3A-202ENST00000554390 Q96NJ1 140 aa10.24□□□□□ -0.77
PPP4R3A-202ENST00000554390 C8orf17Q9NRJ1 99 aa10.23□□□□□ -0.77
PPP4R3A-202ENST00000554390 KMT2AQ03164 3969 aa10.23□□□□□ -0.77
PPP4R3A-202ENST00000554390 STARD9Q9P2P6 4700 aa10.21□□□□□ -0.77
PPP4R3A-202ENST00000554390 FBN3Q75N90 2809 aa10.2□□□□□ -0.78
PPP4R3A-202ENST00000554390 APLNQ9ULZ1 77 aa10.2□□□□□ -0.78
PPP4R3A-202ENST00000554390 IGHV6-1A0A0B4J1U7 121 aa10.19□□□□□ -0.78
PPP4R3A-202ENST00000554390 PRR26Q8N8Z3 221 aa10.18□□□□□ -0.78
PPP4R3A-202ENST00000554390 A0A087X002 238 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 346.5 ms