RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 KRTAP4-8Q9BYQ9 185 aa11.73□□□□□ -0.53
RCCD1-202ENST00000554302 C20orf202A1L168 122 aa11.71□□□□□ -0.53
RCCD1-202ENST00000554302 PCP2Q8IVA1 136 aa11.71□□□□□ -0.53
RCCD1-202ENST00000554302 FSIP2Q5CZC0 6907 aa11.71□□□□□ -0.54
RCCD1-202ENST00000554302 CRCT1Q9UGL9 99 aa11.7□□□□□ -0.54
RCCD1-202ENST00000554302 CFC1BP0CG36 223 aa11.69□□□□□ -0.54
RCCD1-202ENST00000554302 ATOH7Q8N100 152 aa11.69□□□□□ -0.54
RCCD1-202ENST00000554302 SMIM11BQ8TCY0 68 aa11.69□□□□□ -0.54
RCCD1-202ENST00000554302 NHP2Q9NX24 153 aaKnown RBP11.69□□□□□ -0.54
RCCD1-202ENST00000554302 TRAV13-2A0A0B4J235 113 aa11.68□□□□□ -0.54
RCCD1-202ENST00000554302 RPL37P61927 97 aaKnown RBP11.68□□□□□ -0.54
RCCD1-202ENST00000554302 KRTAP19-1Q8IUB9 90 aa11.66□□□□□ -0.54
RCCD1-202ENST00000554302 TCL1BO95988 128 aa11.62□□□□□ -0.55
RCCD1-202ENST00000554302 SNRPEP62304 92 aaKnown RBP11.61□□□□□ -0.55
RCCD1-202ENST00000554302 FLGP20930 4061 aaPredicted RBP11.6□□□□□ -0.55
RCCD1-202ENST00000554302 KRTAP10-6P60371 365 aaPredicted RBP11.6□□□□□ -0.55
RCCD1-202ENST00000554302 SVIPQ8NHG7 77 aa11.6□□□□□ -0.55
RCCD1-202ENST00000554302 KRTAP23-1A1A580 65 aa11.59□□□□□ -0.55
RCCD1-202ENST00000554302 LINC00575Q6W349 94 aa11.59□□□□□ -0.55
RCCD1-202ENST00000554302 KRTAP4-12Q9BQ66 201 aa11.59□□□□□ -0.55
RCCD1-202ENST00000554302 VAMP3Q15836 100 aa11.56□□□□□ -0.56
RCCD1-202ENST00000554302 F8WEM9 126 aa11.55□□□□□ -0.56
RCCD1-202ENST00000554302 Q6ZQY7 126 aa11.54□□□□□ -0.56
RCCD1-202ENST00000554302 hADV29S1A0JD25 119 aa11.53□□□□□ -0.56
RCCD1-202ENST00000554302 Q6JHZ5 121 aa11.53□□□□□ -0.56
RCCD1-202ENST00000554302 TRBV7-7A0A0K0K1E9 115 aa11.51□□□□□ -0.57
RCCD1-202ENST00000554302 IGFL1Q6UW32 110 aa11.51□□□□□ -0.57
RCCD1-202ENST00000554302 CLEC2BQ92478 149 aa11.51□□□□□ -0.57
RCCD1-202ENST00000554302 OCIAD2Q56VL3 154 aa11.48□□□□□ -0.57
RCCD1-202ENST00000554302 COX6B2Q6YFQ2 88 aa11.47□□□□□ -0.57
RCCD1-202ENST00000554302 HIST3H2BBQ8N257 126 aa11.47□□□□□ -0.57
RCCD1-202ENST00000554302 HIST1H2BLQ99880 126 aa11.47□□□□□ -0.57
RCCD1-202ENST00000554302 M0R2T5 61 aa11.46□□□□□ -0.57
RCCD1-202ENST00000554302 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.45□□□□□ -0.58
RCCD1-202ENST00000554302 PPDPFLQ8WWR9 84 aa11.44□□□□□ -0.58
RCCD1-202ENST00000554302 HSBP1L1C9JCN9 74 aa11.43□□□□□ -0.58
RCCD1-202ENST00000554302 Q75L30 129 aa11.42□□□□□ -0.58
RCCD1-202ENST00000554302 KRTAP3-1Q9BYR8 98 aa11.42□□□□□ -0.58
RCCD1-202ENST00000554302 BVES-AS1Q5T3Y7 98 aa11.41□□□□□ -0.58
RCCD1-202ENST00000554302 OBSCN-AS1Q96MR7 158 aa11.4□□□□□ -0.58
RCCD1-202ENST00000554302 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.39□□□□□ -0.59
RCCD1-202ENST00000554302 S100A2P29034 98 aa11.39□□□□□ -0.59
RCCD1-202ENST00000554302 ATP11AUNQ6ZP68 121 aa11.37□□□□□ -0.59
RCCD1-202ENST00000554302 C12orf57Q99622 126 aa11.37□□□□□ -0.59
RCCD1-202ENST00000554302 SNHG12Q9BXW3 62 aa11.35□□□□□ -0.59
RCCD1-202ENST00000554302 H3BUT2 72 aa11.34□□□□□ -0.59
RCCD1-202ENST00000554302 LST1O00453 97 aa11.34□□□□□ -0.59
RCCD1-202ENST00000554302 SCGB1D1O95968 90 aa11.34□□□□□ -0.59
RCCD1-202ENST00000554302 Q6Q795 121 aa11.33□□□□□ -0.6
RCCD1-202ENST00000554302 HIST1H4GQ99525 98 aa11.33□□□□□ -0.6
RCCD1-202ENST00000554302 COX8AP10176 69 aa11.3□□□□□ -0.6
RCCD1-202ENST00000554302 TRIAP1O43715 76 aa11.29□□□□□ -0.6
RCCD1-202ENST00000554302 DLEU1O43261 78 aa11.28□□□□□ -0.6
RCCD1-202ENST00000554302 LCE3BQ5TA77 95 aa11.28□□□□□ -0.6
RCCD1-202ENST00000554302 Q96NJ1 140 aa11.28□□□□□ -0.6
RCCD1-202ENST00000554302 SS18L2Q9UHA2 77 aa11.28□□□□□ -0.6
RCCD1-202ENST00000554302 CFC1P0CG37 223 aa11.27□□□□□ -0.61
RCCD1-202ENST00000554302 C20orf166-AS1Q96NR2 134 aa11.27□□□□□ -0.61
RCCD1-202ENST00000554302 S100A6P06703 90 aa11.25□□□□□ -0.61
RCCD1-202ENST00000554302 TEN1Q86WV5 123 aa11.25□□□□□ -0.61
RCCD1-202ENST00000554302 A8MUU9 505 aa11.24□□□□□ -0.61
RCCD1-202ENST00000554302 H0YGX0 51 aa11.23□□□□□ -0.61
RCCD1-202ENST00000554302 FAM218AQ96MZ4 157 aa11.23□□□□□ -0.61
RCCD1-202ENST00000554302 NDUFV3P56181 108 aaKnown RBP11.22□□□□□ -0.61
RCCD1-202ENST00000554302 A0A0B4J2C4 111 aa11.21□□□□□ -0.61
RCCD1-202ENST00000554302 RAB37Q96AX2 223 aa11.2□□□□□ -0.62
RCCD1-202ENST00000554302 HIGD1BQ9P298 99 aa11.2□□□□□ -0.62
RCCD1-202ENST00000554302 SNCGO76070 127 aa11.19□□□□□ -0.62
RCCD1-202ENST00000554302 A0A087WSZ3 146 aa11.18□□□□□ -0.62
RCCD1-202ENST00000554302 C14orf144Q96I85 54 aa11.16□□□□□ -0.62
RCCD1-202ENST00000554302 A0A1B0GX51 115 aa11.15□□□□□ -0.62
RCCD1-202ENST00000554302 KRTAP9-8Q9BYQ0 159 aa11.15□□□□□ -0.62
RCCD1-202ENST00000554302 H3BMG7 143 aa11.14□□□□□ -0.63
RCCD1-202ENST00000554302 C2orf91Q6ZV80 131 aa11.14□□□□□ -0.63
RCCD1-202ENST00000554302 A0A1W2PNM2 257 aa11.1□□□□□ -0.63
RCCD1-202ENST00000554302 DSCR10P59022 87 aa11.1□□□□□ -0.63
RCCD1-202ENST00000554302 SPATA45Q537H7 98 aa11.09□□□□□ -0.63
RCCD1-202ENST00000554302 LCE4AQ5TA78 99 aa11.09□□□□□ -0.63
RCCD1-202ENST00000554302 PAM16Q9Y3D7 125 aa11.09□□□□□ -0.63
RCCD1-202ENST00000554302 TRBV20-1A0A075B6N2 111 aa11.08□□□□□ -0.64
RCCD1-202ENST00000554302 CEND1Q8N111 149 aa11.08□□□□□ -0.64
RCCD1-202ENST00000554302 PRO1854Q9UHT4 67 aa11.08□□□□□ -0.64
RCCD1-202ENST00000554302 FABP2P12104 132 aa11.07□□□□□ -0.64
RCCD1-202ENST00000554302 KRTAP9-7A8MTY7 169 aa11.06□□□□□ -0.64
RCCD1-202ENST00000554302 KRTAP16-1A8MUX0 517 aa11.06□□□□□ -0.64
RCCD1-202ENST00000554302 USH2AO75445 5202 aa11.06□□□□□ -0.64
RCCD1-202ENST00000554302 LOC105371267A0A1B0GV96 52 aa11.04□□□□□ -0.64
RCCD1-202ENST00000554302 SSPOA2VEC9 5147 aa11.03□□□□□ -0.64
RCCD1-202ENST00000554302 LINC00313P59037 77 aa11.02□□□□□ -0.65
RCCD1-202ENST00000554302 SIGMAR1Q99720 223 aa11.02□□□□□ -0.65
RCCD1-202ENST00000554302 VAMP8Q9BV40 100 aa11.02□□□□□ -0.65
RCCD1-202ENST00000554302 TRBV7-4A0A0J9YYF1 115 aa11.01□□□□□ -0.65
RCCD1-202ENST00000554302 FXYD2P54710 66 aa11.01□□□□□ -0.65
RCCD1-202ENST00000554302 IGKV4-1P06312 121 aa10.98□□□□□ -0.65
RCCD1-202ENST00000554302 ANKRD29Q8N6D5 301 aa10.98□□□□□ -0.65
RCCD1-202ENST00000554302 MPLKIPQ8TAP9 179 aa10.97□□□□□ -0.65
RCCD1-202ENST00000554302 H3BQ85 93 aa10.95□□□□□ -0.66
RCCD1-202ENST00000554302 NOTCH2NLQ7Z3S9 236 aa10.95□□□□□ -0.66
RCCD1-202ENST00000554302 LINC00472Q9H8W2 130 aa10.95□□□□□ -0.66
RCCD1-202ENST00000554302 ORMDL1Q9P0S3 153 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms