RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 SERF1AO75920 110 aa6.91□□□□□ -1.3
NEDD1-206ENST00000554226 CLEC2BQ92478 149 aa6.91□□□□□ -1.3
NEDD1-206ENST00000554226 F8WEM9 126 aa6.9□□□□□ -1.3
NEDD1-206ENST00000554226 Q96NJ1 140 aa6.9□□□□□ -1.3
NEDD1-206ENST00000554226 SNAPINO95295 136 aa6.89□□□□□ -1.31
NEDD1-206ENST00000554226 IGFL1Q6UW32 110 aa6.89□□□□□ -1.31
NEDD1-206ENST00000554226 MPLKIPQ8TAP9 179 aa6.88□□□□□ -1.31
NEDD1-206ENST00000554226 FABP4P15090 132 aa6.87□□□□□ -1.31
NEDD1-206ENST00000554226 LCE3BQ5TA77 95 aa6.87□□□□□ -1.31
NEDD1-206ENST00000554226 SVBPQ8N300 66 aa6.87□□□□□ -1.31
NEDD1-206ENST00000554226 ZNF815PA8K554 130 aa6.86□□□□□ -1.31
NEDD1-206ENST00000554226 APOC3P02656 99 aa6.86□□□□□ -1.31
NEDD1-206ENST00000554226 ANKRD39Q53RE8 183 aa6.85□□□□□ -1.31
NEDD1-206ENST00000554226 TRAV13-2A0A0B4J235 113 aa6.84□□□□□ -1.31
NEDD1-206ENST00000554226 COPS9Q8WXC6 57 aa6.84□□□□□ -1.31
NEDD1-206ENST00000554226 A6NDN8 102 aa6.83□□□□□ -1.32
NEDD1-206ENST00000554226 LST1O00453 97 aa6.83□□□□□ -1.32
NEDD1-206ENST00000554226 NEBP20929 6669 aa6.82□□□□□ -1.32
NEDD1-206ENST00000554226 FAM236DA0A1B0GTK5 79 aa6.82□□□□□ -1.32
NEDD1-206ENST00000554226 TRGC2P03986 189 aa6.82□□□□□ -1.32
NEDD1-206ENST00000554226 FAM236CP0DP71 79 aa6.82□□□□□ -1.32
NEDD1-206ENST00000554226 IFITM1P13164 125 aa6.82□□□□□ -1.32
NEDD1-206ENST00000554226 NDUFA5Q16718 116 aa6.82□□□□□ -1.32
NEDD1-206ENST00000554226 OCIAD2Q56VL3 154 aa6.82□□□□□ -1.32
NEDD1-206ENST00000554226 SMIM11BQ8TCY0 68 aa6.81□□□□□ -1.32
NEDD1-206ENST00000554226 TTTY13Q9BZ97 58 aa6.81□□□□□ -1.32
NEDD1-206ENST00000554226 KRTAP16-1A8MUX0 517 aa6.8□□□□□ -1.32
NEDD1-206ENST00000554226 SYS1-DBNDD2H3BUS1 97 aa6.8□□□□□ -1.32
NEDD1-206ENST00000554226 Q6ZVH6 145 aa6.8□□□□□ -1.32
NEDD1-206ENST00000554226 HRES1P13985 223 aa6.79□□□□□ -1.32
NEDD1-206ENST00000554226 LINC01545Q5VT33 79 aa6.79□□□□□ -1.32
NEDD1-206ENST00000554226 LINC00575Q6W349 94 aa6.79□□□□□ -1.32
NEDD1-206ENST00000554226 Q6ZQY7 126 aa6.79□□□□□ -1.32
NEDD1-206ENST00000554226 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
NEDD1-206ENST00000554226 SS18L2Q9UHA2 77 aa6.78□□□□□ -1.32
NEDD1-206ENST00000554226 PPDPFLQ8WWR9 84 aa6.77□□□□□ -1.33
NEDD1-206ENST00000554226 SLC7A5P1Q8MH63 180 aa6.76□□□□□ -1.33
NEDD1-206ENST00000554226 SCGB1D1O95968 90 aa6.75□□□□□ -1.33
NEDD1-206ENST00000554226 VAMP3Q15836 100 aa6.75□□□□□ -1.33
NEDD1-206ENST00000554226 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
NEDD1-206ENST00000554226 KRTAP9-9Q9BYP9 154 aa6.75□□□□□ -1.33
NEDD1-206ENST00000554226 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
NEDD1-206ENST00000554226 hADV29S1A0JD25 119 aa6.74□□□□□ -1.33
NEDD1-206ENST00000554226 MUSTN1Q8IVN3 82 aa6.74□□□□□ -1.33
NEDD1-206ENST00000554226 PET117Q6UWS5 81 aa6.73□□□□□ -1.33
NEDD1-206ENST00000554226 KRTAP20-1Q3LI63 56 aa6.72□□□□□ -1.33
NEDD1-206ENST00000554226 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.72□□□□□ -1.33
NEDD1-206ENST00000554226 NOTCH2NLQ7Z3S9 236 aa6.72□□□□□ -1.33
NEDD1-206ENST00000554226 MUC12Q9UKN1 5478 aa6.71□□□□□ -1.34
NEDD1-206ENST00000554226 H3BUT2 72 aa6.69□□□□□ -1.34
NEDD1-206ENST00000554226 DSCR10P59022 87 aa6.69□□□□□ -1.34
NEDD1-206ENST00000554226 TEN1Q86WV5 123 aa6.69□□□□□ -1.34
NEDD1-206ENST00000554226 SNHG12Q9BXW3 62 aa6.68□□□□□ -1.34
NEDD1-206ENST00000554226 MTURNQ8N3F0 131 aa6.66□□□□□ -1.34
NEDD1-206ENST00000554226 A8MWP4 228 aa6.65□□□□□ -1.34
NEDD1-206ENST00000554226 LINC00313P59037 77 aa6.65□□□□□ -1.34
NEDD1-206ENST00000554226 A0A087WSZ3 146 aa6.64□□□□□ -1.35
NEDD1-206ENST00000554226 C3orf79P0CE67 100 aa6.63□□□□□ -1.35
NEDD1-206ENST00000554226 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
NEDD1-206ENST00000554226 COLCA2A8K830 154 aa6.62□□□□□ -1.35
NEDD1-206ENST00000554226 BVES-AS1Q5T3Y7 98 aa6.61□□□□□ -1.35
NEDD1-206ENST00000554226 SIGMAR1Q99720 223 aa6.6□□□□□ -1.35
NEDD1-206ENST00000554226 HIST1H2BKO60814 126 aa6.59□□□□□ -1.35
NEDD1-206ENST00000554226 HIST1H2BJP06899 126 aa6.59□□□□□ -1.35
NEDD1-206ENST00000554226 HIST1H2BOP23527 126 aa6.59□□□□□ -1.35
NEDD1-206ENST00000554226 HIST1H2BBP33778 126 aa6.59□□□□□ -1.35
NEDD1-206ENST00000554226 HIST1H2BDP58876 126 aa6.59□□□□□ -1.35
NEDD1-206ENST00000554226 HIST1H2BCP62807 126 aa6.59□□□□□ -1.35
NEDD1-206ENST00000554226 HIST2H2BEQ16778 126 aa6.59□□□□□ -1.35
NEDD1-206ENST00000554226 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.59□□□□□ -1.35
NEDD1-206ENST00000554226 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
NEDD1-206ENST00000554226 HIST1H2BHQ93079 126 aa6.59□□□□□ -1.35
NEDD1-206ENST00000554226 HIST1H2BNQ99877 126 aa6.59□□□□□ -1.35
NEDD1-206ENST00000554226 HIST1H2BMQ99879 126 aa6.59□□□□□ -1.35
NEDD1-206ENST00000554226 NDUFV3P56181 108 aaKnown RBP6.57□□□□□ -1.36
NEDD1-206ENST00000554226 C12orf57Q99622 126 aa6.55□□□□□ -1.36
NEDD1-206ENST00000554226 IGKV4-1P06312 121 aa6.54□□□□□ -1.36
NEDD1-206ENST00000554226 KRTDAPP60985 99 aa6.54□□□□□ -1.36
NEDD1-206ENST00000554226 A0A1W2PNM2 257 aa6.52□□□□□ -1.37
NEDD1-206ENST00000554226 SPINK7P58062 85 aa6.52□□□□□ -1.37
NEDD1-206ENST00000554226 SNRPEP62304 92 aaKnown RBP6.52□□□□□ -1.37
NEDD1-206ENST00000554226 H3BMG7 143 aa6.51□□□□□ -1.37
NEDD1-206ENST00000554226 COA6Q5JTJ3 125 aaKnown RBP6.51□□□□□ -1.37
NEDD1-206ENST00000554226 ATOH7Q8N100 152 aa6.51□□□□□ -1.37
NEDD1-206ENST00000554226 TRBV7-4A0A0J9YYF1 115 aa6.49□□□□□ -1.37
NEDD1-206ENST00000554226 ZCCHC13Q8WW36 166 aaKnown RBP6.49□□□□□ -1.37
NEDD1-206ENST00000554226 LINC00472Q9H8W2 130 aa6.49□□□□□ -1.37
NEDD1-206ENST00000554226 SNCGO76070 127 aa6.48□□□□□ -1.37
NEDD1-206ENST00000554226 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
NEDD1-206ENST00000554226 IGHV6-1A0A0B4J1U7 121 aa6.46□□□□□ -1.38
NEDD1-206ENST00000554226 H0YGX0 51 aa6.46□□□□□ -1.38
NEDD1-206ENST00000554226 KRTAP5-9P26371 169 aa6.46□□□□□ -1.38
NEDD1-206ENST00000554226 RAB37Q96AX2 223 aa6.46□□□□□ -1.38
NEDD1-206ENST00000554226 MDN1Q9NU22 5596 aa6.46□□□□□ -1.38
NEDD1-206ENST00000554226 C8orf87E5RJ46 101 aa6.45□□□□□ -1.38
NEDD1-206ENST00000554226 FAM218AQ96MZ4 157 aa6.45□□□□□ -1.38
NEDD1-206ENST00000554226 WFDC13Q8IUB5 93 aa6.44□□□□□ -1.38
NEDD1-206ENST00000554226 A0A1B0GX51 115 aa6.43□□□□□ -1.38
NEDD1-206ENST00000554226 KMT2DO14686 5537 aa6.43□□□□□ -1.38
NEDD1-206ENST00000554226 A0A1B0GVX0 72 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms