RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
PABPN1-203ENST00000553960 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
PABPN1-203ENST00000553960 CCKP06307 115 aa6.58□□□□□ -1.36
PABPN1-203ENST00000553960 FAM229BQ4G0N7 80 aa6.58□□□□□ -1.36
PABPN1-203ENST00000553960 Q6JHZ5 121 aa6.58□□□□□ -1.36
PABPN1-203ENST00000553960 Q6ZQT0 140 aa6.58□□□□□ -1.36
PABPN1-203ENST00000553960 ST20-AS1Q8NBB2 130 aa6.58□□□□□ -1.36
PABPN1-203ENST00000553960 SRRM2Q9UQ35 2752 aaKnown RBP6.58□□□□□ -1.36
PABPN1-203ENST00000553960 KRTAP10-4P60372 401 aaPredicted RBP6.57□□□□□ -1.36
PABPN1-203ENST00000553960 Q6Q795 121 aa6.57□□□□□ -1.36
PABPN1-203ENST00000553960 DSCR8Q96T75 97 aa6.57□□□□□ -1.36
PABPN1-203ENST00000553960 LAMTOR3Q9UHA4 124 aa6.57□□□□□ -1.36
PABPN1-203ENST00000553960 SPINK6Q6UWN8 80 aa6.56□□□□□ -1.36
PABPN1-203ENST00000553960 RYR3Q15413 4870 aa6.54□□□□□ -1.36
PABPN1-203ENST00000553960 VPS13BQ7Z7G8 4022 aa6.54□□□□□ -1.36
PABPN1-203ENST00000553960 C14orf132Q9NPU4 83 aa6.54□□□□□ -1.36
PABPN1-203ENST00000553960 F8WEM9 126 aa6.53□□□□□ -1.36
PABPN1-203ENST00000553960 CRYGAP11844 174 aa6.52□□□□□ -1.37
PABPN1-203ENST00000553960 APOBP04114 4563 aaKnown RBP6.52□□□□□ -1.37
PABPN1-203ENST00000553960 CD164Q04900 197 aa6.51□□□□□ -1.37
PABPN1-203ENST00000553960 GAGE2AQ6NT46 116 aa6.51□□□□□ -1.37
PABPN1-203ENST00000553960 SSBP3-AS1Q7Z2R9 100 aa6.51□□□□□ -1.37
PABPN1-203ENST00000553960 Q8NBF4 154 aa6.51□□□□□ -1.37
PABPN1-203ENST00000553960 DEFB105AQ8NG35 78 aa6.51□□□□□ -1.37
PABPN1-203ENST00000553960 TRBV7-7A0A0K0K1E9 115 aa6.5□□□□□ -1.37
PABPN1-203ENST00000553960 KRTAP1-4P0C5Y4 121 aa6.5□□□□□ -1.37
PABPN1-203ENST00000553960 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
PABPN1-203ENST00000553960 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
PABPN1-203ENST00000553960 IGFL1Q6UW32 110 aa6.48□□□□□ -1.37
PABPN1-203ENST00000553960 A0A1W2PNM2 257 aa6.47□□□□□ -1.37
PABPN1-203ENST00000553960 C3orf22Q8N5N4 141 aa6.47□□□□□ -1.37
PABPN1-203ENST00000553960 FAM229AH3BQW9 127 aa6.46□□□□□ -1.38
PABPN1-203ENST00000553960 Q5XG85 94 aa6.46□□□□□ -1.38
PABPN1-203ENST00000553960 LINC00643Q86TS7 51 aa6.46□□□□□ -1.38
PABPN1-203ENST00000553960 LINC00846Q9NV44 126 aa6.45□□□□□ -1.38
PABPN1-203ENST00000553960 HAMPP81172 84 aa6.44□□□□□ -1.38
PABPN1-203ENST00000553960 ATP5EP2Q5VTU8 51 aa6.44□□□□□ -1.38
PABPN1-203ENST00000553960 IMUPQ9GZP8 106 aa6.44□□□□□ -1.38
PABPN1-203ENST00000553960 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
PABPN1-203ENST00000553960 ASB16-AS1Q495Z4 193 aa6.43□□□□□ -1.38
PABPN1-203ENST00000553960 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
PABPN1-203ENST00000553960 Q8N1X5 172 aa6.42□□□□□ -1.38
PABPN1-203ENST00000553960 UBL5Q9BZL1 73 aa6.42□□□□□ -1.38
PABPN1-203ENST00000553960 HSPG2P98160 4391 aa6.41□□□□□ -1.38
PABPN1-203ENST00000553960 SMR3BP02814 79 aaPredicted RBP6.4□□□□□ -1.38
PABPN1-203ENST00000553960 CXCL6P80162 114 aa6.4□□□□□ -1.38
PABPN1-203ENST00000553960 KRTAP13-2Q52LG2 175 aa6.4□□□□□ -1.38
PABPN1-203ENST00000553960 A0A087X002 238 aa6.39□□□□□ -1.39
PABPN1-203ENST00000553960 SS18L2Q9UHA2 77 aa6.39□□□□□ -1.39
PABPN1-203ENST00000553960 RYR1P21817 5038 aa6.38□□□□□ -1.39
PABPN1-203ENST00000553960 MOBPQ13875 183 aa6.38□□□□□ -1.39
PABPN1-203ENST00000553960 SPAG11AQ6PDA7 123 aa6.38□□□□□ -1.39
PABPN1-203ENST00000553960 Q6ZVQ6 151 aa6.38□□□□□ -1.39
PABPN1-203ENST00000553960 FAT1Q14517 4588 aa6.37□□□□□ -1.39
PABPN1-203ENST00000553960 Q5VSD8 79 aa6.37□□□□□ -1.39
PABPN1-203ENST00000553960 SIGMAR1Q99720 223 aa6.37□□□□□ -1.39
PABPN1-203ENST00000553960 VPS25Q9BRG1 176 aa6.37□□□□□ -1.39
PABPN1-203ENST00000553960 PKHD1L1Q86WI1 4243 aa6.36□□□□□ -1.39
PABPN1-203ENST00000553960 IGLV9-49A0A0B4J1Y8 123 aa6.36□□□□□ -1.39
PABPN1-203ENST00000553960 NREPQ16612 68 aa6.36□□□□□ -1.39
PABPN1-203ENST00000553960 C9orf153Q5TBE3 101 aa6.36□□□□□ -1.39
PABPN1-203ENST00000553960 A0A1B0GV72 72 aa6.35□□□□□ -1.39
PABPN1-203ENST00000553960 SPINK1P00995 79 aa6.35□□□□□ -1.39
PABPN1-203ENST00000553960 LINC00472Q9H8W2 130 aa6.35□□□□□ -1.39
PABPN1-203ENST00000553960 ANAPC11Q9NYG5 84 aa6.35□□□□□ -1.39
PABPN1-203ENST00000553960 J3KT08 172 aa6.34□□□□□ -1.39
PABPN1-203ENST00000553960 A0A087WSZ3 146 aa6.33□□□□□ -1.4
PABPN1-203ENST00000553960 SCGB1A1P11684 91 aa6.32□□□□□ -1.4
PABPN1-203ENST00000553960 KRTAP10-8P60410 259 aa6.32□□□□□ -1.4
PABPN1-203ENST00000553960 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
PABPN1-203ENST00000553960 MT-ATP8P03928 68 aa6.3□□□□□ -1.4
PABPN1-203ENST00000553960 Q96NJ1 140 aa6.3□□□□□ -1.4
PABPN1-203ENST00000553960 LIMD2Q9BT23 127 aa6.3□□□□□ -1.4
PABPN1-203ENST00000553960 KRTAP17-1Q9BYP8 105 aa6.3□□□□□ -1.4
PABPN1-203ENST00000553960 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
PABPN1-203ENST00000553960 A0A0G2JQZ4 141 aa6.28□□□□□ -1.4
PABPN1-203ENST00000553960 BPY2O14599 106 aa6.28□□□□□ -1.4
PABPN1-203ENST00000553960 OXTP01178 125 aa6.28□□□□□ -1.4
PABPN1-203ENST00000553960 PRR26Q8N8Z3 221 aa6.28□□□□□ -1.4
PABPN1-203ENST00000553960 EPPK1P58107 5090 aaKnown RBP6.28□□□□□ -1.4
PABPN1-203ENST00000553960 DSCR10P59022 87 aa6.27□□□□□ -1.41
PABPN1-203ENST00000553960 HIST1H4AP62805 103 aaKnown RBP6.27□□□□□ -1.41
PABPN1-203ENST00000553960 LINC00304Q8N9R0 145 aa6.27□□□□□ -1.41
PABPN1-203ENST00000553960 A8MWP4 228 aa6.25□□□□□ -1.41
PABPN1-203ENST00000553960 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
PABPN1-203ENST00000553960 IGKV4-1P06312 121 aa6.23□□□□□ -1.41
PABPN1-203ENST00000553960 PRR15Q8IV56 129 aa6.23□□□□□ -1.41
PABPN1-203ENST00000553960 C1orf195Q5TG92 126 aa6.22□□□□□ -1.41
PABPN1-203ENST00000553960 IGKV3D-7A0A0C4DH55 119 aa6.21□□□□□ -1.42
PABPN1-203ENST00000553960 KRTAP29-1A8MX34 341 aaPredicted RBP6.21□□□□□ -1.42
PABPN1-203ENST00000553960 MT1HL1P0DM35 61 aa6.21□□□□□ -1.42
PABPN1-203ENST00000553960 NDUFB1O75438 58 aa6.2□□□□□ -1.42
PABPN1-203ENST00000553960 BIRC6Q9NR09 4857 aa6.19□□□□□ -1.42
PABPN1-203ENST00000553960 DMBT1Q9UGM3 2413 aaPredicted RBP6.18□□□□□ -1.42
PABPN1-203ENST00000553960 A0A1B0GVX0 72 aa6.17□□□□□ -1.42
PABPN1-203ENST00000553960 C8orf87E5RJ46 101 aa6.17□□□□□ -1.42
PABPN1-203ENST00000553960 J3QL48 77 aa6.17□□□□□ -1.42
PABPN1-203ENST00000553960 K7EQZ3 153 aa6.17□□□□□ -1.42
PABPN1-203ENST00000553960 HRCT1Q6UXD1 115 aa6.17□□□□□ -1.42
PABPN1-203ENST00000553960 SMIM20Q8N5G0 67 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms