RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PRR4Q16378 134 aa4.9□□□□□ -1.63
PSEN1-209ENST00000553855 KRTAP13-2Q52LG2 175 aa4.9□□□□□ -1.63
PSEN1-209ENST00000553855 SPAG11AQ6PDA7 123 aa4.9□□□□□ -1.63
PSEN1-209ENST00000553855 TRBV7-6A0A0J9YX20 115 aa4.89□□□□□ -1.63
PSEN1-209ENST00000553855 ERC2-IT1O76042 136 aa4.89□□□□□ -1.63
PSEN1-209ENST00000553855 ELOF1P60002 83 aaKnown RBP4.89□□□□□ -1.63
PSEN1-209ENST00000553855 TAL2Q16559 108 aa4.89□□□□□ -1.63
PSEN1-209ENST00000553855 C14orf144Q96I85 54 aa4.89□□□□□ -1.63
PSEN1-209ENST00000553855 Q9BRP9 147 aa4.89□□□□□ -1.63
PSEN1-209ENST00000553855 PRO1933Q9H354 126 aa4.89□□□□□ -1.63
PSEN1-209ENST00000553855 TNXBP22105 4242 aa4.89□□□□□ -1.63
PSEN1-209ENST00000553855 SNCGO76070 127 aa4.88□□□□□ -1.63
PSEN1-209ENST00000553855 LINC00483Q53H64 154 aa4.88□□□□□ -1.63
PSEN1-209ENST00000553855 C9orf153Q5TBE3 101 aa4.88□□□□□ -1.63
PSEN1-209ENST00000553855 C3orf22Q8N5N4 141 aa4.88□□□□□ -1.63
PSEN1-209ENST00000553855 LAMTOR3Q9UHA4 124 aa4.88□□□□□ -1.63
PSEN1-209ENST00000553855 SSBP3-AS1Q7Z2R9 100 aa4.87□□□□□ -1.63
PSEN1-209ENST00000553855 RAB37Q96AX2 223 aa4.87□□□□□ -1.63
PSEN1-209ENST00000553855 HIGD1BQ9P298 99 aa4.87□□□□□ -1.63
PSEN1-209ENST00000553855 UQCR10Q9UDW1 63 aa4.87□□□□□ -1.63
PSEN1-209ENST00000553855 MOBPQ13875 183 aa4.86□□□□□ -1.63
PSEN1-209ENST00000553855 ST20-AS1Q8NBB2 130 aa4.86□□□□□ -1.63
PSEN1-209ENST00000553855 Q8NBF4 154 aa4.86□□□□□ -1.63
PSEN1-209ENST00000553855 SMIM11BQ8TCY0 68 aa4.86□□□□□ -1.63
PSEN1-209ENST00000553855 M0R143 59 aa4.85□□□□□ -1.63
PSEN1-209ENST00000553855 SPINK1P00995 79 aa4.85□□□□□ -1.63
PSEN1-209ENST00000553855 BVES-AS1Q5T3Y7 98 aa4.85□□□□□ -1.63
PSEN1-209ENST00000553855 DEFB105AQ8NG35 78 aa4.85□□□□□ -1.63
PSEN1-209ENST00000553855 TEX49A0A1B0GTD5 131 aa4.84□□□□□ -1.63
PSEN1-209ENST00000553855 H7C2G1 150 aa4.84□□□□□ -1.63
PSEN1-209ENST00000553855 Q1RN00 199 aa4.84□□□□□ -1.63
PSEN1-209ENST00000553855 F8WEM9 126 aa4.83□□□□□ -1.64
PSEN1-209ENST00000553855 SPRR1BP22528 89 aa4.83□□□□□ -1.64
PSEN1-209ENST00000553855 MUC2Q02817 5179 aa4.82□□□□□ -1.64
PSEN1-209ENST00000553855 hADV29S1A0JD25 119 aa4.82□□□□□ -1.64
PSEN1-209ENST00000553855 CEND1Q8N111 149 aa4.82□□□□□ -1.64
PSEN1-209ENST00000553855 A0A0B4J2C4 111 aa4.81□□□□□ -1.64
PSEN1-209ENST00000553855 HSD52Q0P140 79 aa4.81□□□□□ -1.64
PSEN1-209ENST00000553855 H0YGX0 51 aa4.8□□□□□ -1.64
PSEN1-209ENST00000553855 CFC1BP0CG36 223 aa4.8□□□□□ -1.64
PSEN1-209ENST00000553855 CFC1P0CG37 223 aa4.8□□□□□ -1.64
PSEN1-209ENST00000553855 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
PSEN1-209ENST00000553855 LINC00575Q6W349 94 aa4.8□□□□□ -1.64
PSEN1-209ENST00000553855 C2orf91Q6ZV80 131 aa4.8□□□□□ -1.64
PSEN1-209ENST00000553855 RETNLBQ9BQ08 111 aa4.8□□□□□ -1.64
PSEN1-209ENST00000553855 LIMD2Q9BT23 127 aa4.8□□□□□ -1.64
PSEN1-209ENST00000553855 SNHG12Q9BXW3 62 aa4.8□□□□□ -1.64
PSEN1-209ENST00000553855 IGLV7-46A0A075B6I9 117 aa4.79□□□□□ -1.64
PSEN1-209ENST00000553855 COL5A1-AS1Q5SY13 56 aa4.79□□□□□ -1.64
PSEN1-209ENST00000553855 FP248Q71RG6 208 aaPredicted RBP4.79□□□□□ -1.64
PSEN1-209ENST00000553855 PRO1854Q9UHT4 67 aa4.79□□□□□ -1.64
PSEN1-209ENST00000553855 FAT4Q6V0I7 4981 aa4.79□□□□□ -1.64
PSEN1-209ENST00000553855 IGLV5-48A0A075B6I7 105 aa4.78□□□□□ -1.64
PSEN1-209ENST00000553855 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.78□□□□□ -1.64
PSEN1-209ENST00000553855 Q6ZQY7 126 aa4.78□□□□□ -1.64
PSEN1-209ENST00000553855 COX6CP09669 75 aa4.77□□□□□ -1.65
PSEN1-209ENST00000553855 PSMB2P49721 201 aa4.77□□□□□ -1.65
PSEN1-209ENST00000553855 OCIAD2Q56VL3 154 aa4.77□□□□□ -1.65
PSEN1-209ENST00000553855 HRCT1Q6UXD1 115 aa4.77□□□□□ -1.65
PSEN1-209ENST00000553855 Q6ZVQ6 151 aa4.77□□□□□ -1.65
PSEN1-209ENST00000553855 SMIM29Q86T20 159 aa4.77□□□□□ -1.65
PSEN1-209ENST00000553855 PPDPFLQ8WWR9 84 aa4.77□□□□□ -1.65
PSEN1-209ENST00000553855 FXYD2P54710 66 aa4.76□□□□□ -1.65
PSEN1-209ENST00000553855 CD164Q04900 197 aa4.76□□□□□ -1.65
PSEN1-209ENST00000553855 Q8N377 158 aa4.76□□□□□ -1.65
PSEN1-209ENST00000553855 LRP2P98164 4655 aa4.76□□□□□ -1.65
PSEN1-209ENST00000553855 A0A1B0GX51 115 aa4.75□□□□□ -1.65
PSEN1-209ENST00000553855 DNAL4O96015 105 aa4.75□□□□□ -1.65
PSEN1-209ENST00000553855 LINC01547P58512 204 aaPredicted RBP4.75□□□□□ -1.65
PSEN1-209ENST00000553855 A0A1B0GV90 55 aa4.74□□□□□ -1.65
PSEN1-209ENST00000553855 TPRXLQ17RH7 258 aa4.74□□□□□ -1.65
PSEN1-209ENST00000553855 Q6JHZ5 121 aa4.74□□□□□ -1.65
PSEN1-209ENST00000553855 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
PSEN1-209ENST00000553855 FAM218AQ96MZ4 157 aa4.74□□□□□ -1.65
PSEN1-209ENST00000553855 H3BQ85 93 aa4.73□□□□□ -1.65
PSEN1-209ENST00000553855 TCL1BO95988 128 aa4.73□□□□□ -1.65
PSEN1-209ENST00000553855 BATFQ16520 125 aa4.73□□□□□ -1.65
PSEN1-209ENST00000553855 SCGB1C2P0DMR2 95 aa4.72□□□□□ -1.65
PSEN1-209ENST00000553855 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
PSEN1-209ENST00000553855 FABP2P12104 132 aa4.71□□□□□ -1.66
PSEN1-209ENST00000553855 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
PSEN1-209ENST00000553855 K7ERJ3 54 aa4.7□□□□□ -1.66
PSEN1-209ENST00000553855 CLEC2BQ92478 149 aa4.7□□□□□ -1.66
PSEN1-209ENST00000553855 ORMDL1Q9P0S3 153 aa4.69□□□□□ -1.66
PSEN1-209ENST00000553855 IGLV8-61A0A075B6I0 122 aa4.68□□□□□ -1.66
PSEN1-209ENST00000553855 NDUFV3P56181 108 aaKnown RBP4.68□□□□□ -1.66
PSEN1-209ENST00000553855 Q5XG85 94 aa4.68□□□□□ -1.66
PSEN1-209ENST00000553855 LPAP08519 4548 aa4.67□□□□□ -1.66
PSEN1-209ENST00000553855 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
PSEN1-209ENST00000553855 A0A0U1RQV1 116 aa4.67□□□□□ -1.66
PSEN1-209ENST00000553855 H3BMG7 143 aa4.67□□□□□ -1.66
PSEN1-209ENST00000553855 TMEM256-PLSCR3K7ERE1 68 aa4.67□□□□□ -1.66
PSEN1-209ENST00000553855 IGFL1Q6UW32 110 aa4.67□□□□□ -1.66
PSEN1-209ENST00000553855 A0A0G2JQZ4 141 aa4.66□□□□□ -1.66
PSEN1-209ENST00000553855 TRBV7-7A0A0K0K1E9 115 aa4.66□□□□□ -1.66
PSEN1-209ENST00000553855 H3BUT2 72 aa4.66□□□□□ -1.66
PSEN1-209ENST00000553855 TAX1BP3O14907 124 aa4.66□□□□□ -1.66
PSEN1-209ENST00000553855 KRTAP13-3Q3SY46 172 aa4.66□□□□□ -1.66
PSEN1-209ENST00000553855 LYRM7Q5U5X0 104 aa4.66□□□□□ -1.66
PSEN1-209ENST00000553855 SS18L2Q9UHA2 77 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms