RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 SFTA2Q6UW10 78 aa5.75□□□□□ -1.49
ACTN1-210ENST00000553779 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
ACTN1-210ENST00000553779 ZNF706Q9Y5V0 76 aaPredicted RBP5.75□□□□□ -1.49
ACTN1-210ENST00000553779 CCDC179H3BU77 68 aa5.74□□□□□ -1.49
ACTN1-210ENST00000553779 LST1O00453 97 aa5.74□□□□□ -1.49
ACTN1-210ENST00000553779 LINC00158P58513 81 aa5.74□□□□□ -1.49
ACTN1-210ENST00000553779 LINC00337Q8N6G1 96 aa5.74□□□□□ -1.49
ACTN1-210ENST00000553779 SMIM20Q8N5G0 67 aa5.73□□□□□ -1.49
ACTN1-210ENST00000553779 C3orf22Q8N5N4 141 aa5.73□□□□□ -1.49
ACTN1-210ENST00000553779 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
ACTN1-210ENST00000553779 IGLV5-39A0A0G2JS06 123 aa5.72□□□□□ -1.49
ACTN1-210ENST00000553779 A0A0U1RRA0 63 aa5.72□□□□□ -1.49
ACTN1-210ENST00000553779 TEX49A0A1B0GTD5 131 aa5.72□□□□□ -1.49
ACTN1-210ENST00000553779 M0R378 163 aa5.72□□□□□ -1.49
ACTN1-210ENST00000553779 TRACP01848 142 aa5.72□□□□□ -1.49
ACTN1-210ENST00000553779 SPAG11AQ6PDA7 123 aa5.72□□□□□ -1.49
ACTN1-210ENST00000553779 TRIAP1O43715 76 aa5.71□□□□□ -1.5
ACTN1-210ENST00000553779 DAND5Q8N907 189 aa5.71□□□□□ -1.5
ACTN1-210ENST00000553779 ETDCA0A1B0GVM5 59 aa5.7□□□□□ -1.5
ACTN1-210ENST00000553779 NCR3O14931 201 aa5.7□□□□□ -1.5
ACTN1-210ENST00000553779 TSPEAR-AS2P59090 65 aa5.7□□□□□ -1.5
ACTN1-210ENST00000553779 C5orf47Q569G3 176 aa5.7□□□□□ -1.5
ACTN1-210ENST00000553779 NDUFA12Q9UI09 145 aa5.7□□□□□ -1.5
ACTN1-210ENST00000553779 ATOX1O00244 68 aa5.69□□□□□ -1.5
ACTN1-210ENST00000553779 PRYO14603 147 aa5.69□□□□□ -1.5
ACTN1-210ENST00000553779 FP248Q71RG6 208 aaPredicted RBP5.69□□□□□ -1.5
ACTN1-210ENST00000553779 Q8NBF4 154 aa5.69□□□□□ -1.5
ACTN1-210ENST00000553779 SPRR4Q96PI1 79 aa5.69□□□□□ -1.5
ACTN1-210ENST00000553779 LITAFQ99732 161 aa5.69□□□□□ -1.5
ACTN1-210ENST00000553779 J3KT08 172 aa5.68□□□□□ -1.5
ACTN1-210ENST00000553779 OR13C6PQ8NH95 151 aa5.68□□□□□ -1.5
ACTN1-210ENST00000553779 COX7CP15954 63 aa5.67□□□□□ -1.5
ACTN1-210ENST00000553779 LCE2AQ5TA79 106 aaPredicted RBP5.67□□□□□ -1.5
ACTN1-210ENST00000553779 C9orf153Q5TBE3 101 aa5.67□□□□□ -1.5
ACTN1-210ENST00000553779 Q8NDZ9 215 aa5.67□□□□□ -1.5
ACTN1-210ENST00000553779 H7C2G1 150 aa5.66□□□□□ -1.5
ACTN1-210ENST00000553779 EIF4EBP3O60516 100 aaPredicted RBP5.66□□□□□ -1.5
ACTN1-210ENST00000553779 IGLV9-49A0A0B4J1Y8 123 aa5.65□□□□□ -1.5
ACTN1-210ENST00000553779 LINC01547P58512 204 aaPredicted RBP5.65□□□□□ -1.5
ACTN1-210ENST00000553779 FAM236AA0A1B0GUQ0 79 aa5.64□□□□□ -1.51
ACTN1-210ENST00000553779 FAM236BA0A1B0GV22 79 aa5.64□□□□□ -1.51
ACTN1-210ENST00000553779 H0YGX0 51 aa5.64□□□□□ -1.51
ACTN1-210ENST00000553779 SPINK1P00995 79 aa5.64□□□□□ -1.51
ACTN1-210ENST00000553779 TMEM258P61165 79 aa5.64□□□□□ -1.51
ACTN1-210ENST00000553779 HIST1H4AP62805 103 aaKnown RBP5.64□□□□□ -1.51
ACTN1-210ENST00000553779 MOBPQ13875 183 aa5.64□□□□□ -1.51
ACTN1-210ENST00000553779 GAGE2AQ6NT46 116 aa5.64□□□□□ -1.51
ACTN1-210ENST00000553779 MIR7-3HGQ8N6C7 128 aa5.64□□□□□ -1.51
ACTN1-210ENST00000553779 SMCR5Q8TEV8 140 aa5.64□□□□□ -1.51
ACTN1-210ENST00000553779 TRAV13-2A0A0B4J235 113 aa5.63□□□□□ -1.51
ACTN1-210ENST00000553779 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
ACTN1-210ENST00000553779 SEC61BP60468 96 aaKnown RBP5.63□□□□□ -1.51
ACTN1-210ENST00000553779 S100A7L2Q5SY68 101 aa5.63□□□□□ -1.51
ACTN1-210ENST00000553779 TRBV10-3A0A0K0K1G6 114 aa5.62□□□□□ -1.51
ACTN1-210ENST00000553779 BAALC-AS2P0C853 105 aa5.62□□□□□ -1.51
ACTN1-210ENST00000553779 MUC17Q685J3 4493 aa5.62□□□□□ -1.51
ACTN1-210ENST00000553779 KRTAP13-3Q3SY46 172 aa5.61□□□□□ -1.51
ACTN1-210ENST00000553779 ADAMTSL4-AS1Q5T5F5 129 aa5.61□□□□□ -1.51
ACTN1-210ENST00000553779 LINC00308Q8TCZ7 52 aa5.61□□□□□ -1.51
ACTN1-210ENST00000553779 KCNQ1DNQ9H478 68 aa5.61□□□□□ -1.51
ACTN1-210ENST00000553779 Q6JHZ5 121 aa5.6□□□□□ -1.51
ACTN1-210ENST00000553779 SERP2Q8N6R1 65 aa5.6□□□□□ -1.51
ACTN1-210ENST00000553779 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
ACTN1-210ENST00000553779 ATP5EP2Q5VTU8 51 aa5.59□□□□□ -1.51
ACTN1-210ENST00000553779 CLEC2BQ92478 149 aa5.59□□□□□ -1.51
ACTN1-210ENST00000553779 SPRR1AP35321 89 aa5.58□□□□□ -1.52
ACTN1-210ENST00000553779 LINC00483Q53H64 154 aa5.58□□□□□ -1.52
ACTN1-210ENST00000553779 OBSCN-AS1Q96MR7 158 aa5.58□□□□□ -1.52
ACTN1-210ENST00000553779 NDUFC2O95298 119 aa5.57□□□□□ -1.52
ACTN1-210ENST00000553779 SSBP3-AS1Q7Z2R9 100 aa5.57□□□□□ -1.52
ACTN1-210ENST00000553779 H3BQ85 93 aa5.56□□□□□ -1.52
ACTN1-210ENST00000553779 DNAL4O96015 105 aa5.56□□□□□ -1.52
ACTN1-210ENST00000553779 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
ACTN1-210ENST00000553779 Q6ZRX8 168 aa5.56□□□□□ -1.52
ACTN1-210ENST00000553779 TRAV23DV6A0A075B6W5 121 aa5.55□□□□□ -1.52
ACTN1-210ENST00000553779 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
ACTN1-210ENST00000553779 JMJD7-PLA2G4BH0Y9G9 81 aa5.55□□□□□ -1.52
ACTN1-210ENST00000553779 ERC2-IT1O76042 136 aa5.55□□□□□ -1.52
ACTN1-210ENST00000553779 Q8N377 158 aa5.55□□□□□ -1.52
ACTN1-210ENST00000553779 hADV29S1A0JD25 119 aa5.54□□□□□ -1.52
ACTN1-210ENST00000553779 NPC2P61916 151 aa5.54□□□□□ -1.52
ACTN1-210ENST00000553779 Q9BRP9 147 aa5.53□□□□□ -1.52
ACTN1-210ENST00000553779 LIMD2Q9BT23 127 aa5.53□□□□□ -1.52
ACTN1-210ENST00000553779 ZNF73O43830 326 aaPredicted RBP5.51□□□□□ -1.53
ACTN1-210ENST00000553779 CCKP06307 115 aa5.51□□□□□ -1.53
ACTN1-210ENST00000553779 XP32Q5T750 250 aa5.51□□□□□ -1.53
ACTN1-210ENST00000553779 HRCT1Q6UXD1 115 aa5.51□□□□□ -1.53
ACTN1-210ENST00000553779 IGLV6-57P01721 117 aa5.5□□□□□ -1.53
ACTN1-210ENST00000553779 TMEM256-PLSCR3K7ERE1 68 aa5.49□□□□□ -1.53
ACTN1-210ENST00000553779 GHRHP01286 108 aa5.49□□□□□ -1.53
ACTN1-210ENST00000553779 ST20-AS1Q8NBB2 130 aa5.49□□□□□ -1.53
ACTN1-210ENST00000553779 KRTAP4-1Q9BYQ7 146 aa5.49□□□□□ -1.53
ACTN1-210ENST00000553779 ORMDL1Q9P0S3 153 aa5.49□□□□□ -1.53
ACTN1-210ENST00000553779 C9orf92A6NGG3 77 aa5.48□□□□□ -1.53
ACTN1-210ENST00000553779 NDUFC1O43677 76 aa5.48□□□□□ -1.53
ACTN1-210ENST00000553779 PDE6GP18545 87 aa5.48□□□□□ -1.53
ACTN1-210ENST00000553779 SOSTDC1Q6X4U4 206 aa5.48□□□□□ -1.53
ACTN1-210ENST00000553779 LAMTOR3Q9UHA4 124 aa5.48□□□□□ -1.53
ACTN1-210ENST00000553779 ATP5EP56381 51 aaPredicted RBP5.47□□□□□ -1.53
ACTN1-210ENST00000553779 DHRS4-AS1Q9P1J3 65 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms