RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 A0A096LNI7 61 aa3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 LINC01546A6NGU7 62 aa3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 HIGD1CA8MV81 97 aa3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 TSHBP01222 138 aa3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 CFC1BP0CG36 223 aa3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 CFC1P0CG37 223 aa3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 XCL1P47992 114 aa3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 CXCL6P80162 114 aa3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 RBM3P98179 157 aaKnown RBP3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 ATP5EP2Q5VTU8 51 aa3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 C15orf56Q8N910 161 aa3.43□□□□□ -1.86
SMARCE1P3-201ENST00000553649 TRAV13-2A0A0B4J235 113 aa3.42□□□□□ -1.86
SMARCE1P3-201ENST00000553649 H7BZZ5 65 aa3.42□□□□□ -1.86
SMARCE1P3-201ENST00000553649 ZNF73O43830 326 aaPredicted RBP3.42□□□□□ -1.86
SMARCE1P3-201ENST00000553649 CYSTM1Q9H1C7 97 aa3.42□□□□□ -1.86
SMARCE1P3-201ENST00000553649 MRPL35Q9NZE8 188 aaKnown RBP3.42□□□□□ -1.86
SMARCE1P3-201ENST00000553649 TRAV7A0A075B6U4 112 aa3.41□□□□□ -1.86
SMARCE1P3-201ENST00000553649 IGKV2D-26A0A0A0MRZ7 120 aa3.41□□□□□ -1.86
SMARCE1P3-201ENST00000553649 TRAV12-1A0A0B4J245 112 aa3.41□□□□□ -1.86
SMARCE1P3-201ENST00000553649 TRBV10-3A0A0K0K1G6 114 aa3.41□□□□□ -1.86
SMARCE1P3-201ENST00000553649 TMEM256-PLSCR3K7ERE1 68 aa3.41□□□□□ -1.86
SMARCE1P3-201ENST00000553649 M0QY20 66 aa3.41□□□□□ -1.86
SMARCE1P3-201ENST00000553649 Q1T7F1 81 aa3.41□□□□□ -1.86
SMARCE1P3-201ENST00000553649 Q6ZRP5 223 aa3.41□□□□□ -1.86
SMARCE1P3-201ENST00000553649 CHCHD10Q8WYQ3 142 aaPredicted RBP3.41□□□□□ -1.86
SMARCE1P3-201ENST00000553649 TIMM17AQ99595 171 aa3.41□□□□□ -1.86
SMARCE1P3-201ENST00000553649 RPP21Q9H633 154 aaKnown RBP3.41□□□□□ -1.86
SMARCE1P3-201ENST00000553649 A0A1B0GUV1 79 aa3.4□□□□□ -1.87
SMARCE1P3-201ENST00000553649 ZNF22P17026 224 aaPredicted RBP3.4□□□□□ -1.87
SMARCE1P3-201ENST00000553649 SS18Q15532 418 aa3.4□□□□□ -1.87
SMARCE1P3-201ENST00000553649 ATP11AUNQ6ZP68 121 aa3.4□□□□□ -1.87
SMARCE1P3-201ENST00000553649 OPRPNQ99935 248 aaPredicted RBP3.4□□□□□ -1.87
SMARCE1P3-201ENST00000553649 LINC00474Q9P2X8 69 aa3.4□□□□□ -1.87
SMARCE1P3-201ENST00000553649 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 A0A096LNJ9 63 aa3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 GVQW2A0A096LPI5 108 aaPredicted RBP3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 A0A1B0GUT8 65 aa3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 IGKV2-29A2NJV5 120 aaPredicted RBP3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 SMIM1B2RUZ4 78 aa3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 H7C423 109 aa3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 LST1O00453 97 aa3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 PRR4Q16378 134 aa3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 MRPL51Q4U2R6 128 aaKnown RBP3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 ORMDL3Q8N138 153 aa3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
SMARCE1P3-201ENST00000553649 A8MUN3 132 aa3.38□□□□□ -1.87
SMARCE1P3-201ENST00000553649 UBE2AP49459 152 aa3.38□□□□□ -1.87
SMARCE1P3-201ENST00000553649 MP68P56378 58 aa3.38□□□□□ -1.87
SMARCE1P3-201ENST00000553649 C1orf137Q5JT78 98 aa3.38□□□□□ -1.87
SMARCE1P3-201ENST00000553649 C7orf65Q6ZTY9 151 aa3.38□□□□□ -1.87
SMARCE1P3-201ENST00000553649 C20orf197Q8N268 126 aa3.38□□□□□ -1.87
SMARCE1P3-201ENST00000553649 NKAPP1Q8N9T2 125 aa3.38□□□□□ -1.87
SMARCE1P3-201ENST00000553649 UBE2D4Q9Y2X8 147 aa3.38□□□□□ -1.87
SMARCE1P3-201ENST00000553649 NEBP20929 6669 aa3.38□□□□□ -1.87
SMARCE1P3-201ENST00000553649 IGHV3OR16-9A0A0B4J2B5 98 aa3.37□□□□□ -1.87
SMARCE1P3-201ENST00000553649 A0A1W2PNN7 141 aa3.37□□□□□ -1.87
SMARCE1P3-201ENST00000553649 F8VRH5 84 aa3.37□□□□□ -1.87
SMARCE1P3-201ENST00000553649 ERC2-IT1O76042 136 aa3.37□□□□□ -1.87
SMARCE1P3-201ENST00000553649 SYCNQ0VAF6 134 aa3.37□□□□□ -1.87
SMARCE1P3-201ENST00000553649 KIAA0087Q14695 138 aa3.37□□□□□ -1.87
SMARCE1P3-201ENST00000553649 SMCR5Q8TEV8 140 aa3.37□□□□□ -1.87
SMARCE1P3-201ENST00000553649 DIRC1Q969H9 104 aa3.37□□□□□ -1.87
SMARCE1P3-201ENST00000553649 PSORS1C2Q9UIG4 136 aa3.37□□□□□ -1.87
SMARCE1P3-201ENST00000553649 A0A087X002 238 aa3.36□□□□□ -1.87
SMARCE1P3-201ENST00000553649 TMEM223A0PJW6 202 aa3.36□□□□□ -1.87
SMARCE1P3-201ENST00000553649 ZNF815PA8K554 130 aa3.36□□□□□ -1.87
SMARCE1P3-201ENST00000553649 H0Y9J4 135 aa3.36□□□□□ -1.87
SMARCE1P3-201ENST00000553649 K7EMI3 77 aa3.36□□□□□ -1.87
SMARCE1P3-201ENST00000553649 COX7A2LO14548 114 aa3.36□□□□□ -1.87
SMARCE1P3-201ENST00000553649 C9orf116Q5BN46 136 aaPredicted RBP3.36□□□□□ -1.87
SMARCE1P3-201ENST00000553649 LYZL1Q6UWQ5 148 aa3.36□□□□□ -1.87
SMARCE1P3-201ENST00000553649 RPL39LQ96EH5 51 aaKnown RBP3.36□□□□□ -1.87
SMARCE1P3-201ENST00000553649 IGLV4-69A0A075B6H9 119 aa3.35□□□□□ -1.87
SMARCE1P3-201ENST00000553649 LINC00959A0A1B0GUT2 108 aa3.35□□□□□ -1.87
SMARCE1P3-201ENST00000553649 Q1RN00 199 aa3.35□□□□□ -1.87
SMARCE1P3-201ENST00000553649 FAM19A3Q7Z5A8 133 aa3.35□□□□□ -1.87
SMARCE1P3-201ENST00000553649 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
SMARCE1P3-201ENST00000553649 CAMK2N2Q96S95 79 aa3.35□□□□□ -1.87
SMARCE1P3-201ENST00000553649 LOC389332A0A1B0GUA5 103 aa3.34□□□□□ -1.87
SMARCE1P3-201ENST00000553649 IGLV7-43P04211 117 aa3.34□□□□□ -1.87
SMARCE1P3-201ENST00000553649 ASB16-AS1Q495Z4 193 aa3.34□□□□□ -1.87
SMARCE1P3-201ENST00000553649 SFTA2Q6UW10 78 aa3.34□□□□□ -1.87
SMARCE1P3-201ENST00000553649 NOTCH2NLQ7Z3S9 236 aa3.34□□□□□ -1.87
SMARCE1P3-201ENST00000553649 FAM218AQ96MZ4 157 aa3.34□□□□□ -1.87
SMARCE1P3-201ENST00000553649 TTTY13Q9BZ97 58 aa3.34□□□□□ -1.87
SMARCE1P3-201ENST00000553649 FAM168BA1KXE4 195 aa3.33□□□□□ -1.88
SMARCE1P3-201ENST00000553649 SDHAF1A6NFY7 115 aa3.33□□□□□ -1.88
SMARCE1P3-201ENST00000553649 F8WEM9 126 aa3.33□□□□□ -1.88
SMARCE1P3-201ENST00000553649 DNAL4O96015 105 aa3.33□□□□□ -1.88
SMARCE1P3-201ENST00000553649 LINC01547P58512 204 aaPredicted RBP3.33□□□□□ -1.88
SMARCE1P3-201ENST00000553649 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
SMARCE1P3-201ENST00000553649 CYP4F30PQ9H0H9 118 aa3.33□□□□□ -1.88
SMARCE1P3-201ENST00000553649 IGLV1-50A0A075B6I6 118 aa3.32□□□□□ -1.88
SMARCE1P3-201ENST00000553649 D6R8Y8 96 aa3.32□□□□□ -1.88
SMARCE1P3-201ENST00000553649 I3L3M4 83 aa3.32□□□□□ -1.88
SMARCE1P3-201ENST00000553649 PSPHP1O15172 72 aa3.32□□□□□ -1.88
SMARCE1P3-201ENST00000553649 PPP1R17O96001 155 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms