RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 NOTCH2NLQ7Z3S9 236 aa6.6□□□□□ -1.35
PRPF39-204ENST00000553605 LITAFQ99732 161 aa6.6□□□□□ -1.35
PRPF39-204ENST00000553605 MDN1Q9NU22 5596 aa6.59□□□□□ -1.35
PRPF39-204ENST00000553605 MTURNQ8N3F0 131 aa6.59□□□□□ -1.35
PRPF39-204ENST00000553605 A4D1N5 150 aa6.58□□□□□ -1.36
PRPF39-204ENST00000553605 DPM2O94777 84 aa6.58□□□□□ -1.36
PRPF39-204ENST00000553605 NHP2Q9NX24 153 aaKnown RBP6.58□□□□□ -1.36
PRPF39-204ENST00000553605 TMEM218A2RU14 115 aa6.57□□□□□ -1.36
PRPF39-204ENST00000553605 KRTAP5-9P26371 169 aa6.56□□□□□ -1.36
PRPF39-204ENST00000553605 DSCR10P59022 87 aa6.56□□□□□ -1.36
PRPF39-204ENST00000553605 PMCHL2Q9BQD1 86 aa6.56□□□□□ -1.36
PRPF39-204ENST00000553605 TRAV13-2A0A0B4J235 113 aa6.55□□□□□ -1.36
PRPF39-204ENST00000553605 ZNF815PA8K554 130 aa6.55□□□□□ -1.36
PRPF39-204ENST00000553605 TIMM17BO60830 172 aa6.55□□□□□ -1.36
PRPF39-204ENST00000553605 HSBP1O75506 76 aa6.55□□□□□ -1.36
PRPF39-204ENST00000553605 IGKCP01834 107 aa6.55□□□□□ -1.36
PRPF39-204ENST00000553605 KMT2DO14686 5537 aa6.54□□□□□ -1.36
PRPF39-204ENST00000553605 OCIAD2Q56VL3 154 aa6.54□□□□□ -1.36
PRPF39-204ENST00000553605 SLC7A5P1Q8MH63 180 aa6.54□□□□□ -1.36
PRPF39-204ENST00000553605 A6NN06 94 aa6.53□□□□□ -1.36
PRPF39-204ENST00000553605 E9PLD3 99 aa6.53□□□□□ -1.36
PRPF39-204ENST00000553605 SERF1AO75920 110 aa6.53□□□□□ -1.36
PRPF39-204ENST00000553605 A6NDN8 102 aa6.52□□□□□ -1.37
PRPF39-204ENST00000553605 LEPROTL1O95214 131 aa6.52□□□□□ -1.37
PRPF39-204ENST00000553605 UQCC3Q6UW78 93 aa6.51□□□□□ -1.37
PRPF39-204ENST00000553605 SS18L2Q9UHA2 77 aa6.51□□□□□ -1.37
PRPF39-204ENST00000553605 KRTAP4-12Q9BQ66 201 aa6.49□□□□□ -1.37
PRPF39-204ENST00000553605 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
PRPF39-204ENST00000553605 LINC00313P59037 77 aa6.47□□□□□ -1.37
PRPF39-204ENST00000553605 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
PRPF39-204ENST00000553605 Q6ZQY7 126 aa6.46□□□□□ -1.38
PRPF39-204ENST00000553605 CLLU1Q5K131 121 aa6.45□□□□□ -1.38
PRPF39-204ENST00000553605 SMIM11BQ8TCY0 68 aa6.45□□□□□ -1.38
PRPF39-204ENST00000553605 HSPB8Q9UJY1 196 aa6.45□□□□□ -1.38
PRPF39-204ENST00000553605 FABP4P15090 132 aa6.44□□□□□ -1.38
PRPF39-204ENST00000553605 LINC00575Q6W349 94 aa6.44□□□□□ -1.38
PRPF39-204ENST00000553605 COLCA2A8K830 154 aa6.43□□□□□ -1.38
PRPF39-204ENST00000553605 H3BUT2 72 aa6.43□□□□□ -1.38
PRPF39-204ENST00000553605 hADV29S1A0JD25 119 aa6.42□□□□□ -1.38
PRPF39-204ENST00000553605 VAMP3Q15836 100 aa6.42□□□□□ -1.38
PRPF39-204ENST00000553605 TMEM238LA0A1B0GVL6 79 aa6.41□□□□□ -1.38
PRPF39-204ENST00000553605 SNHG12Q9BXW3 62 aa6.41□□□□□ -1.38
PRPF39-204ENST00000553605 SCGB1D1O95968 90 aa6.4□□□□□ -1.38
PRPF39-204ENST00000553605 COPS9Q8WXC6 57 aa6.4□□□□□ -1.38
PRPF39-204ENST00000553605 SIGMAR1Q99720 223 aa6.4□□□□□ -1.38
PRPF39-204ENST00000553605 TTTY13Q9BZ97 58 aa6.4□□□□□ -1.38
PRPF39-204ENST00000553605 A0A087WSZ3 146 aa6.39□□□□□ -1.39
PRPF39-204ENST00000553605 LINC00310P59036 64 aa6.39□□□□□ -1.39
PRPF39-204ENST00000553605 TEN1Q86WV5 123 aa6.39□□□□□ -1.39
PRPF39-204ENST00000553605 IFITM1P13164 125 aa6.38□□□□□ -1.39
PRPF39-204ENST00000553605 SPINK7P58062 85 aa6.38□□□□□ -1.39
PRPF39-204ENST00000553605 PPDPFLQ8WWR9 84 aa6.37□□□□□ -1.39
PRPF39-204ENST00000553605 KRTAP2-2Q9BYT5 123 aa6.36□□□□□ -1.39
PRPF39-204ENST00000553605 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
PRPF39-204ENST00000553605 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.35□□□□□ -1.39
PRPF39-204ENST00000553605 SCGB1D4Q6XE38 83 aa6.35□□□□□ -1.39
PRPF39-204ENST00000553605 MUSTN1Q8IVN3 82 aa6.35□□□□□ -1.39
PRPF39-204ENST00000553605 MT1BP07438 61 aa6.33□□□□□ -1.4
PRPF39-204ENST00000553605 A0A1W2PNM2 257 aa6.32□□□□□ -1.4
PRPF39-204ENST00000553605 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
PRPF39-204ENST00000553605 KRTAP10-5P60370 271 aa6.32□□□□□ -1.4
PRPF39-204ENST00000553605 WFDC13Q8IUB5 93 aa6.31□□□□□ -1.4
PRPF39-204ENST00000553605 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
PRPF39-204ENST00000553605 YPEL4Q96NS1 127 aa6.31□□□□□ -1.4
PRPF39-204ENST00000553605 SPRR2EP22531 72 aa6.29□□□□□ -1.4
PRPF39-204ENST00000553605 SPRR2BP35325 72 aa6.29□□□□□ -1.4
PRPF39-204ENST00000553605 SPRR2AP35326 72 aa6.29□□□□□ -1.4
PRPF39-204ENST00000553605 Q5VV11 94 aa6.29□□□□□ -1.4
PRPF39-204ENST00000553605 ZCCHC13Q8WW36 166 aaKnown RBP6.29□□□□□ -1.4
PRPF39-204ENST00000553605 SYS1-DBNDD2H3BUS1 97 aa6.28□□□□□ -1.4
PRPF39-204ENST00000553605 TRGC2P03986 189 aa6.27□□□□□ -1.41
PRPF39-204ENST00000553605 IGHV6-1A0A0B4J1U7 121 aa6.26□□□□□ -1.41
PRPF39-204ENST00000553605 APOC3P02656 99 aa6.26□□□□□ -1.41
PRPF39-204ENST00000553605 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
PRPF39-204ENST00000553605 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
PRPF39-204ENST00000553605 SNAPINO95295 136 aa6.25□□□□□ -1.41
PRPF39-204ENST00000553605 NDUFV3P56181 108 aaKnown RBP6.24□□□□□ -1.41
PRPF39-204ENST00000553605 LINC01545Q5VT33 79 aa6.24□□□□□ -1.41
PRPF39-204ENST00000553605 DEFB116Q30KQ4 102 aa6.23□□□□□ -1.41
PRPF39-204ENST00000553605 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
PRPF39-204ENST00000553605 C12orf57Q99622 126 aa6.23□□□□□ -1.41
PRPF39-204ENST00000553605 H1FX-AS1Q4G0G2 97 aa6.22□□□□□ -1.41
PRPF39-204ENST00000553605 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
PRPF39-204ENST00000553605 SVBPQ8N300 66 aa6.21□□□□□ -1.42
PRPF39-204ENST00000553605 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
PRPF39-204ENST00000553605 H3BMG7 143 aa6.2□□□□□ -1.42
PRPF39-204ENST00000553605 C3orf79P0CE67 100 aa6.2□□□□□ -1.42
PRPF39-204ENST00000553605 BVES-AS1Q5T3Y7 98 aa6.2□□□□□ -1.42
PRPF39-204ENST00000553605 PET117Q6UWS5 81 aa6.19□□□□□ -1.42
PRPF39-204ENST00000553605 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
PRPF39-204ENST00000553605 LINC00472Q9H8W2 130 aa6.18□□□□□ -1.42
PRPF39-204ENST00000553605 NDUFA5Q16718 116 aa6.17□□□□□ -1.42
PRPF39-204ENST00000553605 RAB37Q96AX2 223 aa6.15□□□□□ -1.42
PRPF39-204ENST00000553605 SPRR2GQ9BYE4 73 aa6.14□□□□□ -1.43
PRPF39-204ENST00000553605 GPR98Q8WXG9 6306 aa6.14□□□□□ -1.43
PRPF39-204ENST00000553605 TRBV7-4A0A0J9YYF1 115 aa6.13□□□□□ -1.43
PRPF39-204ENST00000553605 FAM236AA0A1B0GUQ0 79 aa6.13□□□□□ -1.43
PRPF39-204ENST00000553605 FAM236BA0A1B0GV22 79 aa6.13□□□□□ -1.43
PRPF39-204ENST00000553605 A0A1B0GVX0 72 aa6.13□□□□□ -1.43
PRPF39-204ENST00000553605 SNCGO76070 127 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms