RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 CSAG1Q6PB30 78 aa2.66□□□□□ -1.98
RDH11-204ENST00000553578 SPAG11AQ6PDA7 123 aa2.66□□□□□ -1.98
RDH11-204ENST00000553578 C10orf99Q6UWK7 81 aa2.65□□□□□ -1.98
RDH11-204ENST00000553578 Q8NAQ8 132 aa2.65□□□□□ -1.98
RDH11-204ENST00000553578 IGKV2-28A0A075B6P5 120 aa2.65□□□□□ -1.98
RDH11-204ENST00000553578 IGKV2D-28P01615 120 aa2.65□□□□□ -1.98
RDH11-204ENST00000553578 EGFEM1PQ0D2K5 195 aa2.65□□□□□ -1.98
RDH11-204ENST00000553578 DEFB114Q30KQ6 69 aa2.65□□□□□ -1.98
RDH11-204ENST00000553578 H3BQ85 93 aa2.65□□□□□ -1.99
RDH11-204ENST00000553578 CCL18P55774 89 aa2.65□□□□□ -1.99
RDH11-204ENST00000553578 TENM4Q6N022 2769 aa2.65□□□□□ -1.99
RDH11-204ENST00000553578 TRGV2A0A075B6R0 118 aa2.65□□□□□ -1.99
RDH11-204ENST00000553578 IGLV1-51P01701 117 aa2.65□□□□□ -1.99
RDH11-204ENST00000553578 IGLV1-50A0A075B6I6 118 aa2.64□□□□□ -1.99
RDH11-204ENST00000553578 ETDCA0A1B0GVM5 59 aa2.64□□□□□ -1.99
RDH11-204ENST00000553578 GCN1Q92616 2671 aaKnown RBP2.64□□□□□ -1.99
RDH11-204ENST00000553578 IGLV4-60A0A075B6I1 120 aa2.64□□□□□ -1.99
RDH11-204ENST00000553578 M0QY20 66 aa2.64□□□□□ -1.99
RDH11-204ENST00000553578 GIG44P09565 113 aaPredicted RBP2.64□□□□□ -1.99
RDH11-204ENST00000553578 SPINK7P58062 85 aa2.64□□□□□ -1.99
RDH11-204ENST00000553578 MUC7Q8TAX7 377 aa2.64□□□□□ -1.99
RDH11-204ENST00000553578 LOC110117498A0A087WWA1 95 aa2.64□□□□□ -1.99
RDH11-204ENST00000553578 H3BPC8 53 aa2.64□□□□□ -1.99
RDH11-204ENST00000553578 COX6A2Q02221 97 aa2.64□□□□□ -1.99
RDH11-204ENST00000553578 DEFB136Q30KP8 78 aa2.64□□□□□ -1.99
RDH11-204ENST00000553578 IGKV4-1P06312 121 aa2.63□□□□□ -1.99
RDH11-204ENST00000553578 APCP25054 2843 aa2.63□□□□□ -1.99
RDH11-204ENST00000553578 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.63□□□□□ -1.99
RDH11-204ENST00000553578 A0A1B0GW54 56 aa2.63□□□□□ -1.99
RDH11-204ENST00000553578 Q6ZQY7 126 aa2.63□□□□□ -1.99
RDH11-204ENST00000553578 TEX15Q9BXT5 2789 aa2.62□□□□□ -1.99
RDH11-204ENST00000553578 ELOF1P60002 83 aaKnown RBP2.62□□□□□ -1.99
RDH11-204ENST00000553578 ST20-AS1Q8NBB2 130 aa2.62□□□□□ -1.99
RDH11-204ENST00000553578 LYSTQ99698 3801 aa2.62□□□□□ -1.99
RDH11-204ENST00000553578 IGKV2D-24A0A075B6R9 120 aa2.62□□□□□ -1.99
RDH11-204ENST00000553578 TRBV6-4A0A1B0GX49 114 aa2.62□□□□□ -1.99
RDH11-204ENST00000553578 DEFB131AP59861 70 aa2.62□□□□□ -1.99
RDH11-204ENST00000553578 COA5Q86WW8 74 aa2.62□□□□□ -1.99
RDH11-204ENST00000553578 KRTAP10-3P60369 221 aa2.61□□□□□ -1.99
RDH11-204ENST00000553578 TRRAPQ9Y4A5 3859 aa2.61□□□□□ -1.99
RDH11-204ENST00000553578 MXRA5Q9NR99 2828 aa2.61□□□□□ -1.99
RDH11-204ENST00000553578 DNAH7Q8WXX0 4024 aa2.61□□□□□ -1.99
RDH11-204ENST00000553578 MIR22HGQ0VDD5 57 aa2.61□□□□□ -1.99
RDH11-204ENST00000553578 KLK12Q9UKR0 248 aa2.61□□□□□ -1.99
RDH11-204ENST00000553578 TRGV1A0A0A0MS02 117 aa2.6□□□□□ -1.99
RDH11-204ENST00000553578 LINC00575Q6W349 94 aa2.6□□□□□ -1.99
RDH11-204ENST00000553578 TRGV4A0A0C4DH28 118 aa2.6□□□□□ -1.99
RDH11-204ENST00000553578 ROMO1P60602 79 aa2.6□□□□□ -1.99
RDH11-204ENST00000553578 CLPSL2Q6UWE3 100 aa2.6□□□□□ -1.99
RDH11-204ENST00000553578 LINC00167Q96N53 147 aa2.6□□□□□ -1.99
RDH11-204ENST00000553578 COX7BP24311 80 aa2.59□□□□□ -1.99
RDH11-204ENST00000553578 Q9BRP9 147 aa2.59□□□□□ -1.99
RDH11-204ENST00000553578 A0A096LPF7 62 aa2.59□□□□□ -1.99
RDH11-204ENST00000553578 DNAH6Q9C0G6 4158 aa2.59□□□□□ -1.99
RDH11-204ENST00000553578 H0Y9P7 68 aa2.59□□□□□ -2
RDH11-204ENST00000553578 H3BNG1 76 aa2.59□□□□□ -2
RDH11-204ENST00000553578 WFDC13Q8IUB5 93 aa2.59□□□□□ -2
RDH11-204ENST00000553578 A0A1W2PNM2 257 aa2.58□□□□□ -2
RDH11-204ENST00000553578 FAM168BA1KXE4 195 aa2.58□□□□□ -2
RDH11-204ENST00000553578 KPRPQ5T749 579 aaPredicted RBP2.58□□□□□ -2
RDH11-204ENST00000553578 Q6ZR54 194 aa2.58□□□□□ -2
RDH11-204ENST00000553578 ZCCHC13Q8WW36 166 aaKnown RBP2.58□□□□□ -2
RDH11-204ENST00000553578 XAGE1AQ9HD64 81 aa2.58□□□□□ -2
RDH11-204ENST00000553578 OTOGQ6ZRI0 2925 aa2.58□□□□□ -2
RDH11-204ENST00000553578 PRKDCP78527 4128 aaKnown RBP2.58□□□□□ -2
RDH11-204ENST00000553578 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
RDH11-204ENST00000553578 WFDC10BQ8IUB3 73 aa2.58□□□□□ -2
RDH11-204ENST00000553578 LINC01558Q9Y6Z2 57 aa2.58□□□□□ -2
RDH11-204ENST00000553578 IGKV2-24A0A0C4DH68 120 aa2.57□□□□□ -2
RDH11-204ENST00000553578 ITPR3Q14573 2671 aa2.57□□□□□ -2
RDH11-204ENST00000553578 A0A1B0GVX0 72 aa2.57□□□□□ -2
RDH11-204ENST00000553578 A0A1B0GUV1 79 aa2.56□□□□□ -2
RDH11-204ENST00000553578 DEFB130BP0DP73 79 aa2.56□□□□□ -2
RDH11-204ENST00000553578 DEFB130AP0DP74 79 aa2.56□□□□□ -2
RDH11-204ENST00000553578 SPANXA2-OT1Q8N9U9 137 aa2.56□□□□□ -2
RDH11-204ENST00000553578 FLNAP21333 2647 aaKnown RBP2.56□□□□□ -2
RDH11-204ENST00000553578 KRTAP4-16G5E9R7 235 aaPredicted RBP2.56□□□□□ -2
RDH11-204ENST00000553578 PCOTHQ58A44 107 aa2.56□□□□□ -2
RDH11-204ENST00000553578 NOP10Q9NPE3 64 aaKnown RBP2.56□□□□□ -2
RDH11-204ENST00000553578 SETXQ7Z333 2677 aaKnown RBP2.56□□□□□ -2
RDH11-204ENST00000553578 IGLV10-54A0A075B6I4 117 aa2.56□□□□□ -2
RDH11-204ENST00000553578 CYSRT1A8MQ03 144 aa2.56□□□□□ -2
RDH11-204ENST00000553578 ZNF861PO60384 105 aa2.56□□□□□ -2
RDH11-204ENST00000553578 LCE6AA0A183 80 aa2.55□□□□□ -2
RDH11-204ENST00000553578 KRTAP25-1Q3LHN0 102 aa2.55□□□□□ -2
RDH11-204ENST00000553578 DEFB105AQ8NG35 78 aa2.55□□□□□ -2
RDH11-204ENST00000553578 UNC79Q9P2D8 2635 aa2.55□□□□□ -2
RDH11-204ENST00000553578 RTL8CO15255 209 aa2.54□□□□□ -2
RDH11-204ENST00000553578 DEFB4AO15263 64 aa2.54□□□□□ -2
RDH11-204ENST00000553578 HTN3P15516 51 aa2.54□□□□□ -2
RDH11-204ENST00000553578 K7EQZ3 153 aa2.54□□□□□ -2
RDH11-204ENST00000553578 IGLV6-57P01721 117 aa2.54□□□□□ -2
RDH11-204ENST00000553578 NUPR2A6NF83 97 aa2.53□□□□□ -2
RDH11-204ENST00000553578 HUWE1Q7Z6Z7 4374 aaKnown RBP2.53□□□□□ -2
RDH11-204ENST00000553578 CASC10Q5T4H9 136 aa2.53□□□□□ -2
RDH11-204ENST00000553578 PLAC8Q9NZF1 115 aa2.53□□□□□ -2
RDH11-204ENST00000553578 HIVEP1P15822 2718 aa2.53□□□□□ -2
RDH11-204ENST00000553578 TEP1Q99973 2627 aaKnown RBP2.53□□□□□ -2
RDH11-204ENST00000553578 BAHCC1Q9P281 2608 aa2.53□□□□□ -2
RDH11-204ENST00000553578 KCNQ1DNQ9H478 68 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms