RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 LRRIQ1Q96JM4 1722 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 DEPDC5O75140 1603 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 MAP3K1Q13233 1512 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 ANKRD50Q9ULJ7 1429 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 KALRNO60229 2985 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 CELSR3Q9NYQ7 3312 aa0.12□□□□□ -2.39
PCNX4-206ENST00000553513 TENM2Q9NT68 2774 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 ACACBO00763 2458 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 DIP2BQ9P265 1576 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 MAP1AP78559 2803 aaPredicted RBP0.11□□□□□ -2.39
PCNX4-206ENST00000553513 WDFY4Q6ZS81 3184 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 NCOA2Q15596 1464 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 FASNP49327 2511 aaKnown RBP0.11□□□□□ -2.39
PCNX4-206ENST00000553513 SPG11Q96JI7 2443 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 MYCBP2O75592 4640 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 H3BUT2 72 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 WFDC13Q8IUB5 93 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 C18orf32Q8TCD1 76 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 LYSTQ99698 3801 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 PRO3102Q9H379 93 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 CICQ96RK0 1608 aaPredicted RBP0.11□□□□□ -2.39
PCNX4-206ENST00000553513 NBEAL1Q6ZS30 2694 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 HMCN2Q8NDA2 5059 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 TNXBP22105 4242 aa0.11□□□□□ -2.39
PCNX4-206ENST00000553513 RALGAPBQ86X10 1494 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 RICTORQ6R327 1708 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 MYO5CQ9NQX4 1742 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 PRRC2CQ9Y520 2896 aaKnown RBP0.1□□□□□ -2.39
PCNX4-206ENST00000553513 NREPQ16612 68 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 DEFB135Q30KP9 77 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 BVES-AS1Q5T3Y7 98 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 HFM1A2PYH4 1435 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 REV3LO60673 3130 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 ABCA8O94911 1581 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 ITPR1Q14643 2758 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 NRAPQ86VF7 1730 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 PARP4Q9UKK3 1724 aaKnown RBP0.1□□□□□ -2.39
PCNX4-206ENST00000553513 COL12A1Q99715 3063 aa0.1□□□□□ -2.39
PCNX4-206ENST00000553513 ALMS1Q8TCU4 4167 aa0.09□□□□□ -2.39
PCNX4-206ENST00000553513 EIF2AK4Q9P2K8 1649 aaKnown RBP0.09□□□□□ -2.39
PCNX4-206ENST00000553513 USP9YO00507 2555 aaPredicted RBP0.09□□□□□ -2.39
PCNX4-206ENST00000553513 HECTD4Q9Y4D8 3996 aa0.09□□□□□ -2.39
PCNX4-206ENST00000553513 CEP290O15078 2479 aa0.09□□□□□ -2.39
PCNX4-206ENST00000553513 RIF1Q5UIP0 2472 aaKnown RBP0.09□□□□□ -2.39
PCNX4-206ENST00000553513 UTP20O75691 2785 aaKnown RBP0.09□□□□□ -2.39
PCNX4-206ENST00000553513 WIZO95785 1651 aa0.09□□□□□ -2.39
PCNX4-206ENST00000553513 ZC3H13Q5T200 1668 aaKnown RBP0.09□□□□□ -2.39
PCNX4-206ENST00000553513 NHSQ6T4R5 1651 aa0.09□□□□□ -2.39
PCNX4-206ENST00000553513 LCE6AA0A183 80 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 NDUFA4O00483 81 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 PDCD5O14737 125 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 IFI6P09912 130 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 SPRR2BP35325 72 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 UBL5Q9BZL1 73 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 SMCO4Q9NRQ5 59 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 PLXNC1O60486 1568 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 HIVEP1P15822 2718 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 LPAP08519 4548 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 A0A0C4DFX4 3053 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 USP32Q8NFA0 1604 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 AKAP13Q12802 2813 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 MXRA5Q9NR99 2828 aa0.09□□□□□ -2.4
PCNX4-206ENST00000553513 NF1P21359 2839 aa0.08□□□□□ -2.4
PCNX4-206ENST00000553513 GCN1Q92616 2671 aaKnown RBP0.08□□□□□ -2.4
PCNX4-206ENST00000553513 MYO9AB2RTY4 2548 aa0.08□□□□□ -2.4
PCNX4-206ENST00000553513 DEFB131BA0A096LNP1 70 aa0.08□□□□□ -2.4
PCNX4-206ENST00000553513 NDUFA3O95167 84 aa0.08□□□□□ -2.4
PCNX4-206ENST00000553513 LINC00158P58513 81 aa0.08□□□□□ -2.4
PCNX4-206ENST00000553513 DSPP15924 2871 aaKnown RBP0.08□□□□□ -2.4
PCNX4-206ENST00000553513 TEX15Q9BXT5 2789 aa0.08□□□□□ -2.4
PCNX4-206ENST00000553513 HERC2O95714 4834 aa0.08□□□□□ -2.4
PCNX4-206ENST00000553513 MGAM2Q2M2H8 2515 aa0.08□□□□□ -2.4
PCNX4-206ENST00000553513 USH2AO75445 5202 aa0.07□□□□□ -2.4
PCNX4-206ENST00000553513 ZZEF1O43149 2961 aa0.07□□□□□ -2.4
PCNX4-206ENST00000553513 SRCAPQ6ZRS2 3230 aa0.07□□□□□ -2.4
PCNX4-206ENST00000553513 MROH1Q8NDA8 1641 aa0.07□□□□□ -2.4
PCNX4-206ENST00000553513 FAT3Q8TDW7 4589 aa0.07□□□□□ -2.4
PCNX4-206ENST00000553513 TGP01266 2768 aa0.07□□□□□ -2.4
PCNX4-206ENST00000553513 LMTK2Q8IWU2 1503 aa0.07□□□□□ -2.4
PCNX4-206ENST00000553513 DUOX2Q9NRD8 1548 aa0.07□□□□□ -2.4
PCNX4-206ENST00000553513 UGGT2Q9NYU1 1516 aa0.07□□□□□ -2.4
PCNX4-206ENST00000553513 MUC12Q9UKN1 5478 aa0.07□□□□□ -2.4
PCNX4-206ENST00000553513 LAMA3Q16787 3333 aa0.07□□□□□ -2.4
PCNX4-206ENST00000553513 ADAMTS12P58397 1594 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 INO80Q9ULG1 1556 aaPredicted RBP0.06□□□□□ -2.4
PCNX4-206ENST00000553513 ANKRD36CQ5JPF3 1778 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 FAM186AA6NE01 2351 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 MADDQ8WXG6 1647 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 RNF17Q9BXT8 1623 aaKnown RBP0.06□□□□□ -2.4
PCNX4-206ENST00000553513 C3P01024 1663 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 ZFHX4Q86UP3 3567 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 MTORP42345 2549 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 TLN2Q9Y4G6 2542 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 NBPF19A0A087WUL8 3843 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 C9orf92A6NGG3 77 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 LYNX1G3V0Z9 82 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 H3BVH4 76 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 ATXN8Q156A1 80 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 DEFB114Q30KQ6 69 aa0.06□□□□□ -2.4
PCNX4-206ENST00000553513 KCNQ1DNQ9H478 68 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms