RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 MEIG1Q5JSS6 88 aa3.82□□□□□ -1.8
ATXN3-219ENST00000553488 BAGE3Q86Y29 109 aa3.82□□□□□ -1.8
ATXN3-219ENST00000553488 ARL17AQ8IVW1 177 aa3.82□□□□□ -1.8
ATXN3-219ENST00000553488 TRAPPC1Q9Y5R8 145 aa3.82□□□□□ -1.8
ATXN3-219ENST00000553488 SPRR1BP22528 89 aa3.81□□□□□ -1.8
ATXN3-219ENST00000553488 PMCHL1Q16048 86 aa3.81□□□□□ -1.8
ATXN3-219ENST00000553488 MIEN1Q9BRT3 115 aa3.81□□□□□ -1.8
ATXN3-219ENST00000553488 SNHG12Q9BXW3 62 aa3.81□□□□□ -1.8
ATXN3-219ENST00000553488 DLEU1O43261 78 aa3.8□□□□□ -1.8
ATXN3-219ENST00000553488 HRCT1Q6UXD1 115 aa3.8□□□□□ -1.8
ATXN3-219ENST00000553488 C18orf32Q8TCD1 76 aa3.8□□□□□ -1.8
ATXN3-219ENST00000553488 VAMP8Q9BV40 100 aa3.8□□□□□ -1.8
ATXN3-219ENST00000553488 SPANXB1Q9NS25 103 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-219ENST00000553488 TRAV23DV6A0A075B6W5 121 aa3.79□□□□□ -1.8
ATXN3-219ENST00000553488 TSPEAR-AS2P59090 65 aa3.79□□□□□ -1.8
ATXN3-219ENST00000553488 COL5A1-AS1Q5SY13 56 aa3.79□□□□□ -1.8
ATXN3-219ENST00000553488 TRAV12-1A0A0B4J245 112 aa3.78□□□□□ -1.8
ATXN3-219ENST00000553488 ZNF73O43830 326 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-219ENST00000553488 CD164Q04900 197 aa3.78□□□□□ -1.8
ATXN3-219ENST00000553488 Q5XG85 94 aa3.78□□□□□ -1.8
ATXN3-219ENST00000553488 MYMXA0A1B0GTQ4 84 aa3.77□□□□□ -1.81
ATXN3-219ENST00000553488 C20orf202A1L168 122 aa3.77□□□□□ -1.81
ATXN3-219ENST00000553488 NDUFC2O95298 119 aa3.77□□□□□ -1.81
ATXN3-219ENST00000553488 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
ATXN3-219ENST00000553488 C1orf195Q5TG92 126 aa3.77□□□□□ -1.81
ATXN3-219ENST00000553488 MAP1LC3CQ9BXW4 147 aa3.77□□□□□ -1.81
ATXN3-219ENST00000553488 UQCR10Q9UDW1 63 aa3.77□□□□□ -1.81
ATXN3-219ENST00000553488 SERF1AO75920 110 aa3.76□□□□□ -1.81
ATXN3-219ENST00000553488 S100A7L2Q5SY68 101 aa3.76□□□□□ -1.81
ATXN3-219ENST00000553488 SOSTDC1Q6X4U4 206 aa3.76□□□□□ -1.81
ATXN3-219ENST00000553488 H7C2G1 150 aa3.75□□□□□ -1.81
ATXN3-219ENST00000553488 SPATA45Q537H7 98 aa3.75□□□□□ -1.81
ATXN3-219ENST00000553488 SLC25A34Q6PIV7 304 aa3.75□□□□□ -1.81
ATXN3-219ENST00000553488 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
ATXN3-219ENST00000553488 KRTDAPP60985 99 aa3.74□□□□□ -1.81
ATXN3-219ENST00000553488 BATFQ16520 125 aa3.74□□□□□ -1.81
ATXN3-219ENST00000553488 IFI27L1Q96BM0 104 aa3.74□□□□□ -1.81
ATXN3-219ENST00000553488 LAMTOR3Q9UHA4 124 aa3.74□□□□□ -1.81
ATXN3-219ENST00000553488 LEPROTO15243 131 aa3.73□□□□□ -1.81
ATXN3-219ENST00000553488 MT2AP02795 61 aa3.73□□□□□ -1.81
ATXN3-219ENST00000553488 Q1RN00 199 aa3.73□□□□□ -1.81
ATXN3-219ENST00000553488 Q6Q795 121 aa3.73□□□□□ -1.81
ATXN3-219ENST00000553488 A0A0G2JQZ4 141 aa3.72□□□□□ -1.81
ATXN3-219ENST00000553488 C3orf79P0CE67 100 aa3.72□□□□□ -1.81
ATXN3-219ENST00000553488 LITAFQ99732 161 aa3.72□□□□□ -1.81
ATXN3-219ENST00000553488 DHRS4-AS1Q9P1J3 65 aa3.72□□□□□ -1.81
ATXN3-219ENST00000553488 J3QQQ9 107 aa3.71□□□□□ -1.82
ATXN3-219ENST00000553488 HSBP1O75506 76 aa3.71□□□□□ -1.82
ATXN3-219ENST00000553488 MT1FP04733 61 aa3.71□□□□□ -1.82
ATXN3-219ENST00000553488 NMUP48645 174 aa3.71□□□□□ -1.82
ATXN3-219ENST00000553488 ELOF1P60002 83 aaKnown RBP3.71□□□□□ -1.82
ATXN3-219ENST00000553488 NPC2P61916 151 aa3.71□□□□□ -1.82
ATXN3-219ENST00000553488 ADAMTSL4-AS1Q5T5F5 129 aa3.71□□□□□ -1.82
ATXN3-219ENST00000553488 HINT1P49773 126 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-219ENST00000553488 VAMP3Q15836 100 aa3.7□□□□□ -1.82
ATXN3-219ENST00000553488 CHCHD1Q96BP2 118 aaKnown RBP3.7□□□□□ -1.82
ATXN3-219ENST00000553488 NEBP20929 6669 aa3.69□□□□□ -1.82
ATXN3-219ENST00000553488 IGLV5-48A0A075B6I7 105 aa3.69□□□□□ -1.82
ATXN3-219ENST00000553488 A0A0J9YXY3 114 aa3.69□□□□□ -1.82
ATXN3-219ENST00000553488 TEX49A0A1B0GTD5 131 aa3.69□□□□□ -1.82
ATXN3-219ENST00000553488 NOTCH2NLQ7Z3S9 236 aa3.69□□□□□ -1.82
ATXN3-219ENST00000553488 PMCHL2Q9BQD1 86 aa3.69□□□□□ -1.82
ATXN3-219ENST00000553488 COX7BP24311 80 aa3.68□□□□□ -1.82
ATXN3-219ENST00000553488 DEFB105AQ8NG35 78 aa3.68□□□□□ -1.82
ATXN3-219ENST00000553488 SPANXCQ9NY87 97 aa3.68□□□□□ -1.82
ATXN3-219ENST00000553488 HSPB8Q9UJY1 196 aa3.68□□□□□ -1.82
ATXN3-219ENST00000553488 A0A1B0GWB2 263 aa3.67□□□□□ -1.82
ATXN3-219ENST00000553488 K7ERU9 68 aa3.67□□□□□ -1.82
ATXN3-219ENST00000553488 LGALS3P17931 250 aaKnown RBP3.67□□□□□ -1.82
ATXN3-219ENST00000553488 PLNP26678 52 aa3.67□□□□□ -1.82
ATXN3-219ENST00000553488 TAL2Q16559 108 aa3.67□□□□□ -1.82
ATXN3-219ENST00000553488 C6orf99Q4VX62 202 aa3.67□□□□□ -1.82
ATXN3-219ENST00000553488 SPANXDQ9BXN6 97 aa3.67□□□□□ -1.82
ATXN3-219ENST00000553488 SYS1-DBNDD2H3BUS1 97 aa3.66□□□□□ -1.82
ATXN3-219ENST00000553488 LEPROTL1O95214 131 aa3.66□□□□□ -1.82
ATXN3-219ENST00000553488 TCL1BO95988 128 aa3.66□□□□□ -1.82
ATXN3-219ENST00000553488 HERVK_113P61574 105 aa3.66□□□□□ -1.82
ATXN3-219ENST00000553488 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
ATXN3-219ENST00000553488 ATP11AUNQ6ZP68 121 aa3.66□□□□□ -1.82
ATXN3-219ENST00000553488 ATOH7Q8N100 152 aa3.66□□□□□ -1.82
ATXN3-219ENST00000553488 MTURNQ8N3F0 131 aa3.66□□□□□ -1.82
ATXN3-219ENST00000553488 OR13C6PQ8NH95 151 aa3.66□□□□□ -1.82
ATXN3-219ENST00000553488 LINC00308Q8TCZ7 52 aa3.66□□□□□ -1.82
ATXN3-219ENST00000553488 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
ATXN3-219ENST00000553488 A6NDN8 102 aa3.65□□□□□ -1.83
ATXN3-219ENST00000553488 TAX1BP3O14907 124 aa3.65□□□□□ -1.83
ATXN3-219ENST00000553488 DPM2O94777 84 aa3.65□□□□□ -1.83
ATXN3-219ENST00000553488 BVES-AS1Q5T3Y7 98 aa3.65□□□□□ -1.83
ATXN3-219ENST00000553488 GTF2H5Q6ZYL4 71 aa3.65□□□□□ -1.83
ATXN3-219ENST00000553488 OBSCN-AS1Q96MR7 158 aa3.65□□□□□ -1.83
ATXN3-219ENST00000553488 VPS25Q9BRG1 176 aa3.65□□□□□ -1.83
ATXN3-219ENST00000553488 TRBV7-6A0A0J9YX20 115 aa3.64□□□□□ -1.83
ATXN3-219ENST00000553488 IGKCP01834 107 aa3.64□□□□□ -1.83
ATXN3-219ENST00000553488 OCIAD2Q56VL3 154 aa3.64□□□□□ -1.83
ATXN3-219ENST00000553488 LINC01545Q5VT33 79 aa3.64□□□□□ -1.83
ATXN3-219ENST00000553488 OCR1Q9BZK8 76 aa3.64□□□□□ -1.83
ATXN3-219ENST00000553488 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
ATXN3-219ENST00000553488 E9PLD3 99 aa3.63□□□□□ -1.83
ATXN3-219ENST00000553488 TIMM17BO60830 172 aa3.63□□□□□ -1.83
ATXN3-219ENST00000553488 COX8AP10176 69 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms