RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 LRP1BQ9NZR2 4599 aa9.6□□□□□ -0.87
ABCD4-218ENST00000553486 DPH3Q96FX2 82 aa9.59□□□□□ -0.87
ABCD4-218ENST00000553486 KRTAP4-5Q9BYR2 181 aa9.59□□□□□ -0.87
ABCD4-218ENST00000553486 HIST1H4AP62805 103 aaKnown RBP9.58□□□□□ -0.88
ABCD4-218ENST00000553486 PRLHP81277 87 aa9.58□□□□□ -0.88
ABCD4-218ENST00000553486 H0Y9J4 135 aa9.57□□□□□ -0.88
ABCD4-218ENST00000553486 C3orf22Q8N5N4 141 aa9.57□□□□□ -0.88
ABCD4-218ENST00000553486 CDK2AP2O75956 126 aa9.56□□□□□ -0.88
ABCD4-218ENST00000553486 HAMPP81172 84 aa9.56□□□□□ -0.88
ABCD4-218ENST00000553486 SPACA4Q8TDM5 124 aa9.56□□□□□ -0.88
ABCD4-218ENST00000553486 A0A1B0GW54 56 aa9.55□□□□□ -0.88
ABCD4-218ENST00000553486 KRTAP11-1Q8IUC1 163 aa9.55□□□□□ -0.88
ABCD4-218ENST00000553486 HIGD2AQ9BW72 106 aa9.55□□□□□ -0.88
ABCD4-218ENST00000553486 PANO1I0J062 215 aa9.54□□□□□ -0.88
ABCD4-218ENST00000553486 ATOX1O00244 68 aa9.54□□□□□ -0.88
ABCD4-218ENST00000553486 CXCL6P80162 114 aa9.54□□□□□ -0.88
ABCD4-218ENST00000553486 C1orf137Q5JT78 98 aa9.54□□□□□ -0.88
ABCD4-218ENST00000553486 A0A087WVE0 104 aa9.54□□□□□ -0.88
ABCD4-218ENST00000553486 F8WEM9 126 aa9.54□□□□□ -0.88
ABCD4-218ENST00000553486 FUSP35637 526 aaKnown RBP eCLIP9.54□□□□□ -0.88
ABCD4-218ENST00000553486 EPM2AB3EWF7 344 aa9.53□□□□□ -0.88
ABCD4-218ENST00000553486 UBE2AP49459 152 aa9.52□□□□□ -0.89
ABCD4-218ENST00000553486 SMIM29Q86T20 159 aa9.52□□□□□ -0.89
ABCD4-218ENST00000553486 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.52□□□□□ -0.89
ABCD4-218ENST00000553486 DNAH5Q8TE73 4624 aa9.52□□□□□ -0.89
ABCD4-218ENST00000553486 APOBP04114 4563 aaKnown RBP9.51□□□□□ -0.89
ABCD4-218ENST00000553486 BCE1O60756 84 aa9.51□□□□□ -0.89
ABCD4-218ENST00000553486 NREPQ16612 68 aa9.51□□□□□ -0.89
ABCD4-218ENST00000553486 CCDC179H3BU77 68 aa9.5□□□□□ -0.89
ABCD4-218ENST00000553486 Q8NBF4 154 aa9.49□□□□□ -0.89
ABCD4-218ENST00000553486 A0A1W2PNM2 257 aa9.49□□□□□ -0.89
ABCD4-218ENST00000553486 IGLV5-52A0A0A0MRZ9 124 aa9.48□□□□□ -0.89
ABCD4-218ENST00000553486 SPRR1BP22528 89 aa9.47□□□□□ -0.89
ABCD4-218ENST00000553486 KRTAP10-2P60368 255 aa9.47□□□□□ -0.89
ABCD4-218ENST00000553486 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
ABCD4-218ENST00000553486 IGLV8-61A0A075B6I0 122 aa9.46□□□□□ -0.9
ABCD4-218ENST00000553486 Q8N1X5 172 aa9.46□□□□□ -0.9
ABCD4-218ENST00000553486 UQCRQO14949 82 aa9.45□□□□□ -0.9
ABCD4-218ENST00000553486 COX7CP15954 63 aa9.44□□□□□ -0.9
ABCD4-218ENST00000553486 SCXQ7RTU7 201 aa9.44□□□□□ -0.9
ABCD4-218ENST00000553486 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
ABCD4-218ENST00000553486 PLAC8Q9NZF1 115 aa9.44□□□□□ -0.9
ABCD4-218ENST00000553486 BPY2O14599 106 aa9.42□□□□□ -0.9
ABCD4-218ENST00000553486 IGFL1Q6UW32 110 aa9.42□□□□□ -0.9
ABCD4-218ENST00000553486 CRYGAP11844 174 aa9.42□□□□□ -0.9
ABCD4-218ENST00000553486 SERP2Q8N6R1 65 aa9.42□□□□□ -0.9
ABCD4-218ENST00000553486 HERC1Q15751 4861 aa9.38□□□□□ -0.91
ABCD4-218ENST00000553486 C9orf153Q5TBE3 101 aa9.38□□□□□ -0.91
ABCD4-218ENST00000553486 PSORS1C2Q9UIG4 136 aa9.37□□□□□ -0.91
ABCD4-218ENST00000553486 IGKV4-1P06312 121 aa9.35□□□□□ -0.91
ABCD4-218ENST00000553486 SMIM20Q8N5G0 67 aa9.35□□□□□ -0.91
ABCD4-218ENST00000553486 A0A0G2JQZ4 141 aa9.35□□□□□ -0.91
ABCD4-218ENST00000553486 ZNF706Q9Y5V0 76 aaPredicted RBP9.35□□□□□ -0.91
ABCD4-218ENST00000553486 FAT1Q14517 4588 aa9.33□□□□□ -0.92
ABCD4-218ENST00000553486 Q8N9L7 120 aa9.33□□□□□ -0.92
ABCD4-218ENST00000553486 TRAV7A0A075B6U4 112 aa9.31□□□□□ -0.92
ABCD4-218ENST00000553486 ZNF861PO60384 105 aa9.31□□□□□ -0.92
ABCD4-218ENST00000553486 A0A087WSZ3 146 aa9.31□□□□□ -0.92
ABCD4-218ENST00000553486 LINC00483Q53H64 154 aa9.31□□□□□ -0.92
ABCD4-218ENST00000553486 DMBT1Q9UGM3 2413 aaPredicted RBP9.3□□□□□ -0.92
ABCD4-218ENST00000553486 MYCBP2O75592 4640 aa9.29□□□□□ -0.92
ABCD4-218ENST00000553486 KRTAP10-1P60331 282 aa9.28□□□□□ -0.92
ABCD4-218ENST00000553486 SRRM2Q9UQ35 2752 aaKnown RBP9.28□□□□□ -0.92
ABCD4-218ENST00000553486 RPL37AP61513 92 aaKnown RBP9.28□□□□□ -0.92
ABCD4-218ENST00000553486 DSCR10P59022 87 aa9.27□□□□□ -0.93
ABCD4-218ENST00000553486 Q5VSD8 79 aa9.26□□□□□ -0.93
ABCD4-218ENST00000553486 SS18L2Q9UHA2 77 aa9.26□□□□□ -0.93
ABCD4-218ENST00000553486 IGLV9-49A0A0B4J1Y8 123 aa9.25□□□□□ -0.93
ABCD4-218ENST00000553486 IGLV7-43P04211 117 aa9.25□□□□□ -0.93
ABCD4-218ENST00000553486 FAM30AQ9NZY2 134 aa9.25□□□□□ -0.93
ABCD4-218ENST00000553486 VPS13BQ7Z7G8 4022 aa9.25□□□□□ -0.93
ABCD4-218ENST00000553486 CIRBP-AS1Q8TBR5 109 aa9.24□□□□□ -0.93
ABCD4-218ENST00000553486 DNAH8Q96JB1 4490 aa9.23□□□□□ -0.93
ABCD4-218ENST00000553486 K7EQZ3 153 aa9.21□□□□□ -0.93
ABCD4-218ENST00000553486 SMR3BP02814 79 aaPredicted RBP9.21□□□□□ -0.94
ABCD4-218ENST00000553486 Q6ZSA8 131 aa9.21□□□□□ -0.94
ABCD4-218ENST00000553486 DEFB116Q30KQ4 102 aa9.2□□□□□ -0.94
ABCD4-218ENST00000553486 FLG2Q5D862 2391 aaPredicted RBP9.2□□□□□ -0.94
ABCD4-218ENST00000553486 C20orf197Q8N268 126 aa9.19□□□□□ -0.94
ABCD4-218ENST00000553486 LINC00472Q9H8W2 130 aa9.18□□□□□ -0.94
ABCD4-218ENST00000553486 FAM229AH3BQW9 127 aa9.17□□□□□ -0.94
ABCD4-218ENST00000553486 MOBPQ13875 183 aa9.17□□□□□ -0.94
ABCD4-218ENST00000553486 OCR1Q9BZK8 76 aa9.17□□□□□ -0.94
ABCD4-218ENST00000553486 CYSTM1Q9H1C7 97 aa9.17□□□□□ -0.94
ABCD4-218ENST00000553486 HCG22E2RYF7 251 aa9.16□□□□□ -0.94
ABCD4-218ENST00000553486 ANAPC11Q9NYG5 84 aa9.16□□□□□ -0.94
ABCD4-218ENST00000553486 J3KT08 172 aa9.15□□□□□ -0.94
ABCD4-218ENST00000553486 TMEM258P61165 79 aa9.14□□□□□ -0.95
ABCD4-218ENST00000553486 KLKP1Q107X0 134 aa9.14□□□□□ -0.95
ABCD4-218ENST00000553486 A8MWP4 228 aa9.13□□□□□ -0.95
ABCD4-218ENST00000553486 HRCT1Q6UXD1 115 aa9.12□□□□□ -0.95
ABCD4-218ENST00000553486 PRR15Q8IV56 129 aa9.12□□□□□ -0.95
ABCD4-218ENST00000553486 TMEM254Q8TBM7 123 aa9.09□□□□□ -0.95
ABCD4-218ENST00000553486 SNURFQ9Y675 71 aa9.09□□□□□ -0.95
ABCD4-218ENST00000553486 NDUFB1O75438 58 aa9.08□□□□□ -0.96
ABCD4-218ENST00000553486 SSBP3-AS1Q7Z2R9 100 aa9.08□□□□□ -0.96
ABCD4-218ENST00000553486 WFDC13Q8IUB5 93 aa9.08□□□□□ -0.96
ABCD4-218ENST00000553486 NDUFC1O43677 76 aa9.07□□□□□ -0.96
ABCD4-218ENST00000553486 Q96NJ1 140 aa9.07□□□□□ -0.96
ABCD4-218ENST00000553486 PLA2G1BP04054 148 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms