RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 ZNF706Q9Y5V0 76 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-218ENST00000553309 TRBV7-4A0A0J9YYF1 115 aa3.04□□□□□ -1.92
ATXN3-218ENST00000553309 M0R3E3 92 aa3.04□□□□□ -1.92
ATXN3-218ENST00000553309 PPP1R17O96001 155 aa3.04□□□□□ -1.92
ATXN3-218ENST00000553309 FXYD7P58549 80 aa3.04□□□□□ -1.92
ATXN3-218ENST00000553309 AMELXQ99217 191 aa3.04□□□□□ -1.92
ATXN3-218ENST00000553309 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
ATXN3-218ENST00000553309 SNURFQ9Y675 71 aa3.04□□□□□ -1.92
ATXN3-218ENST00000553309 TRBV6-8A0A0A6YYG3 113 aa3.03□□□□□ -1.92
ATXN3-218ENST00000553309 A0A0J9YXY3 114 aa3.03□□□□□ -1.92
ATXN3-218ENST00000553309 LEPROTO15243 131 aa3.03□□□□□ -1.92
ATXN3-218ENST00000553309 ZNF861PO60384 105 aa3.03□□□□□ -1.92
ATXN3-218ENST00000553309 ERHP84090 104 aaKnown RBP3.03□□□□□ -1.92
ATXN3-218ENST00000553309 PRCDQ00LT1 54 aa3.03□□□□□ -1.92
ATXN3-218ENST00000553309 C9orf116Q5BN46 136 aaPredicted RBP3.03□□□□□ -1.92
ATXN3-218ENST00000553309 Q5VV11 94 aa3.03□□□□□ -1.92
ATXN3-218ENST00000553309 Q8NAQ8 132 aa3.03□□□□□ -1.92
ATXN3-218ENST00000553309 SPTSSBQ8NFR3 76 aa3.03□□□□□ -1.92
ATXN3-218ENST00000553309 TMEM254Q8TBM7 123 aa3.03□□□□□ -1.92
ATXN3-218ENST00000553309 TMEM14CQ9P0S9 112 aa3.03□□□□□ -1.92
ATXN3-218ENST00000553309 CHKB-CPT1BH3BT56 60 aa3.02□□□□□ -1.93
ATXN3-218ENST00000553309 IGHV3-23P01764 117 aa3.02□□□□□ -1.93
ATXN3-218ENST00000553309 ZNF833PQ6ZTB9 187 aa3.02□□□□□ -1.93
ATXN3-218ENST00000553309 Q86TA4 180 aa3.02□□□□□ -1.93
ATXN3-218ENST00000553309 CHCHD10Q8WYQ3 142 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-218ENST00000553309 CNFNQ9BYD5 112 aa3.02□□□□□ -1.93
ATXN3-218ENST00000553309 C22orf24Q9Y442 160 aa3.02□□□□□ -1.93
ATXN3-218ENST00000553309 PRR4Q16378 134 aa3.01□□□□□ -1.93
ATXN3-218ENST00000553309 LYZL1Q6UWQ5 148 aa3.01□□□□□ -1.93
ATXN3-218ENST00000553309 ENHOQ6UWT2 76 aa3.01□□□□□ -1.93
ATXN3-218ENST00000553309 TMEM167AQ8TBQ9 72 aa3.01□□□□□ -1.93
ATXN3-218ENST00000553309 FAM104AQ969W3 186 aa3.01□□□□□ -1.93
ATXN3-218ENST00000553309 RNF5Q99942 180 aa3.01□□□□□ -1.93
ATXN3-218ENST00000553309 UBL5Q9BZL1 73 aa3.01□□□□□ -1.93
ATXN3-218ENST00000553309 NDUFA4L2Q9NRX3 87 aa3.01□□□□□ -1.93
ATXN3-218ENST00000553309 TNXBP22105 4242 aa3.01□□□□□ -1.93
ATXN3-218ENST00000553309 IGHV3-43A0A0B4J1X8 118 aa3□□□□□ -1.93
ATXN3-218ENST00000553309 JMJD7-PLA2G4BH0Y9G9 81 aa3□□□□□ -1.93
ATXN3-218ENST00000553309 PSCAO43653 123 aa3□□□□□ -1.93
ATXN3-218ENST00000553309 IGLV2-23P01705 113 aa3□□□□□ -1.93
ATXN3-218ENST00000553309 SAA2P0DJI9 122 aaPredicted RBP3□□□□□ -1.93
ATXN3-218ENST00000553309 IGHV3-43DP0DP04 118 aa3□□□□□ -1.93
ATXN3-218ENST00000553309 HTN3P15516 51 aa3□□□□□ -1.93
ATXN3-218ENST00000553309 RPL27AP46776 148 aaKnown RBP3□□□□□ -1.93
ATXN3-218ENST00000553309 LOC101927531A0A1B0GV80 90 aa2.99□□□□□ -1.93
ATXN3-218ENST00000553309 PDE6HQ13956 83 aa2.99□□□□□ -1.93
ATXN3-218ENST00000553309 MIAQ16674 131 aa2.99□□□□□ -1.93
ATXN3-218ENST00000553309 RPL39P5Q59GN2 51 aa2.99□□□□□ -1.93
ATXN3-218ENST00000553309 C10orf113Q5VZT2 155 aa2.99□□□□□ -1.93
ATXN3-218ENST00000553309 Q8N9L7 120 aa2.99□□□□□ -1.93
ATXN3-218ENST00000553309 C1orf64Q8NEQ6 169 aa2.99□□□□□ -1.93
ATXN3-218ENST00000553309 IGLV4-69A0A075B6H9 119 aa2.98□□□□□ -1.93
ATXN3-218ENST00000553309 IGHV3OR16-13A0A075B7E8 117 aa2.98□□□□□ -1.93
ATXN3-218ENST00000553309 H0YGX0 51 aa2.98□□□□□ -1.93
ATXN3-218ENST00000553309 MT1HL1P0DM35 61 aa2.98□□□□□ -1.93
ATXN3-218ENST00000553309 APELAP0DMC3 54 aa2.98□□□□□ -1.93
ATXN3-218ENST00000553309 ELOF1P60002 83 aaKnown RBP2.98□□□□□ -1.93
ATXN3-218ENST00000553309 MOBPQ13875 183 aa2.98□□□□□ -1.93
ATXN3-218ENST00000553309 NREPQ16612 68 aa2.98□□□□□ -1.93
ATXN3-218ENST00000553309 SPINK9Q5DT21 86 aa2.98□□□□□ -1.93
ATXN3-218ENST00000553309 SMIM2Q9BVW6 85 aa2.98□□□□□ -1.93
ATXN3-218ENST00000553309 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
ATXN3-218ENST00000553309 CDC42SE2Q9NRR3 84 aa2.98□□□□□ -1.93
ATXN3-218ENST00000553309 IGKV1OR2-108A0A075B7D4 117 aa2.97□□□□□ -1.93
ATXN3-218ENST00000553309 TSPEAR-AS2P59090 65 aa2.97□□□□□ -1.93
ATXN3-218ENST00000553309 CASC2Q6XLA1 102 aa2.97□□□□□ -1.93
ATXN3-218ENST00000553309 RETNLBQ9BQ08 111 aa2.97□□□□□ -1.93
ATXN3-218ENST00000553309 XAGE1AQ9HD64 81 aa2.97□□□□□ -1.93
ATXN3-218ENST00000553309 C14orf132Q9NPU4 83 aa2.97□□□□□ -1.93
ATXN3-218ENST00000553309 MRPL36Q9P0J6 103 aaKnown RBP2.97□□□□□ -1.93
ATXN3-218ENST00000553309 IGKV1D-37A0A075B6S9 117 aa2.96□□□□□ -1.94
ATXN3-218ENST00000553309 TRAV12-3A0A0B4J271 114 aa2.96□□□□□ -1.94
ATXN3-218ENST00000553309 A6NED7 52 aa2.96□□□□□ -1.94
ATXN3-218ENST00000553309 CTSGP08311 255 aa2.96□□□□□ -1.94
ATXN3-218ENST00000553309 CRIP1P50238 77 aa2.96□□□□□ -1.94
ATXN3-218ENST00000553309 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
ATXN3-218ENST00000553309 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
ATXN3-218ENST00000553309 NPBQ8NG41 125 aa2.96□□□□□ -1.94
ATXN3-218ENST00000553309 S4R3C0 116 aa2.96□□□□□ -1.94
ATXN3-218ENST00000553309 H3BUA1 57 aa2.95□□□□□ -1.94
ATXN3-218ENST00000553309 LINC00315P59091 139 aa2.95□□□□□ -1.94
ATXN3-218ENST00000553309 KRTAP10-4P60372 401 aaPredicted RBP2.95□□□□□ -1.94
ATXN3-218ENST00000553309 WT1-ASQ06250 92 aa2.95□□□□□ -1.94
ATXN3-218ENST00000553309 FAM74A4Q5TZK3 123 aa2.95□□□□□ -1.94
ATXN3-218ENST00000553309 SND1-IT1Q9HBX3 110 aa2.95□□□□□ -1.94
ATXN3-218ENST00000553309 LPAP08519 4548 aa2.94□□□□□ -1.94
ATXN3-218ENST00000553309 DNAH8Q96JB1 4490 aa2.94□□□□□ -1.94
ATXN3-218ENST00000553309 IGKV3-7A0A075B6H7 116 aa2.94□□□□□ -1.94
ATXN3-218ENST00000553309 NDUFB1O75438 58 aa2.94□□□□□ -1.94
ATXN3-218ENST00000553309 PDE6GP18545 87 aa2.94□□□□□ -1.94
ATXN3-218ENST00000553309 KLK9Q2XQG4 91 aa2.94□□□□□ -1.94
ATXN3-218ENST00000553309 Q6ZRN7 208 aaPredicted RBP2.94□□□□□ -1.94
ATXN3-218ENST00000553309 ZNF625Q96I27 306 aaPredicted RBP2.94□□□□□ -1.94
ATXN3-218ENST00000553309 USMG5Q96IX5 58 aa2.94□□□□□ -1.94
ATXN3-218ENST00000553309 KLK9Q9UKQ9 250 aa2.94□□□□□ -1.94
ATXN3-218ENST00000553309 KLK12Q9UKR0 248 aa2.94□□□□□ -1.94
ATXN3-218ENST00000553309 TRAV21A0A0B4J279 112 aa2.93□□□□□ -1.94
ATXN3-218ENST00000553309 I3L2K1 104 aa2.93□□□□□ -1.94
ATXN3-218ENST00000553309 BPY2O14599 106 aa2.93□□□□□ -1.94
ATXN3-218ENST00000553309 REG3AQ06141 175 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms