RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 HERVK_113P63121 156 aa1.75□□□□□ -2.13
ATXN3-217ENST00000553287 KRTAP13-4Q3LI77 160 aa1.75□□□□□ -2.13
ATXN3-217ENST00000553287 S100ZQ8WXG8 99 aa1.75□□□□□ -2.13
ATXN3-217ENST00000553287 PRELID3AQ96N28 172 aa1.75□□□□□ -2.13
ATXN3-217ENST00000553287 ERG28Q9UKR5 140 aa1.75□□□□□ -2.13
ATXN3-217ENST00000553287 CYSLTR1Q9Y271 337 aa1.75□□□□□ -2.13
ATXN3-217ENST00000553287 TRBV10-3A0A0K0K1G6 114 aa1.74□□□□□ -2.13
ATXN3-217ENST00000553287 KANTRA0A1W2PQU2 76 aa1.74□□□□□ -2.13
ATXN3-217ENST00000553287 LINC00862A6NCI5 91 aa1.74□□□□□ -2.13
ATXN3-217ENST00000553287 NDUFS5O43920 106 aa1.74□□□□□ -2.13
ATXN3-217ENST00000553287 PPBPP02775 128 aa1.74□□□□□ -2.13
ATXN3-217ENST00000553287 SPRR1AP35321 89 aa1.74□□□□□ -2.13
ATXN3-217ENST00000553287 C6orf99Q4VX62 202 aa1.74□□□□□ -2.13
ATXN3-217ENST00000553287 C1orf195Q5TG92 126 aa1.74□□□□□ -2.13
ATXN3-217ENST00000553287 SMIM7Q9BQ49 75 aa1.74□□□□□ -2.13
ATXN3-217ENST00000553287 LINC00846Q9NV44 126 aa1.74□□□□□ -2.13
ATXN3-217ENST00000553287 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
ATXN3-217ENST00000553287 C20orf202A1L168 122 aa1.73□□□□□ -2.13
ATXN3-217ENST00000553287 PSPHP1O15172 72 aa1.73□□□□□ -2.13
ATXN3-217ENST00000553287 HRES1P13985 223 aa1.73□□□□□ -2.13
ATXN3-217ENST00000553287 LINC00158P58513 81 aa1.73□□□□□ -2.13
ATXN3-217ENST00000553287 C20orf166-AS1Q96NR2 134 aa1.73□□□□□ -2.13
ATXN3-217ENST00000553287 OSTCQ9NRP0 149 aa1.73□□□□□ -2.13
ATXN3-217ENST00000553287 NAT8BQ9UHF3 227 aa1.73□□□□□ -2.13
ATXN3-217ENST00000553287 IGHV6-1A0A0B4J1U7 121 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 SMIM27A0A1W2PRY6 76 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 C8orf87E5RJ46 101 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 KRTAP2-3P0C7H8 128 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 SMIM13P0DJ93 91 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 ZNF345Q14585 488 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 PMVKQ15126 192 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 ADIRFQ15847 76 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 ORMDL3Q8N138 153 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 Q8N8P6 123 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 OBSCN-AS1Q96MR7 158 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 SCGB3A1Q96QR1 104 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 LIMD2Q9BT23 127 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 KRTAP2-4Q9BYR9 128 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 KCNQ1DNQ9H478 68 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 MAP1LC3AQ9H492 121 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 CST9LQ9H4G1 147 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 SPANXCQ9NY87 97 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 RBM12B-AS1Q9P1G2 102 aa1.72□□□□□ -2.13
ATXN3-217ENST00000553287 FAM236DA0A1B0GTK5 79 aa1.71□□□□□ -2.14
ATXN3-217ENST00000553287 C9JQL5 133 aa1.71□□□□□ -2.14
ATXN3-217ENST00000553287 SRP19P09132 144 aaKnown RBP1.71□□□□□ -2.14
ATXN3-217ENST00000553287 FAM236CP0DP71 79 aa1.71□□□□□ -2.14
ATXN3-217ENST00000553287 NDUFA6P56556 154 aa1.71□□□□□ -2.14
ATXN3-217ENST00000553287 SEC11AP67812 179 aa1.71□□□□□ -2.14
ATXN3-217ENST00000553287 ATP11AUNQ6ZP68 121 aa1.71□□□□□ -2.14
ATXN3-217ENST00000553287 DEFB105AQ8NG35 78 aa1.71□□□□□ -2.14
ATXN3-217ENST00000553287 OR13C6PQ8NH95 151 aa1.71□□□□□ -2.14
ATXN3-217ENST00000553287 TOMM6Q96B49 74 aa1.71□□□□□ -2.14
ATXN3-217ENST00000553287 PRO0628Q9UI54 55 aa1.71□□□□□ -2.14
ATXN3-217ENST00000553287 TRAV9-1A0A075B6T8 112 aa1.7□□□□□ -2.14
ATXN3-217ENST00000553287 HMSDA8MTL9 139 aa1.7□□□□□ -2.14
ATXN3-217ENST00000553287 F8W036 122 aa1.7□□□□□ -2.14
ATXN3-217ENST00000553287 TMEM250H0YL14 139 aa1.7□□□□□ -2.14
ATXN3-217ENST00000553287 ZNF22P17026 224 aaPredicted RBP1.7□□□□□ -2.14
ATXN3-217ENST00000553287 PSMB2P49721 201 aa1.7□□□□□ -2.14
ATXN3-217ENST00000553287 BATFQ16520 125 aa1.7□□□□□ -2.14
ATXN3-217ENST00000553287 ALKAL2Q6UX46 152 aa1.7□□□□□ -2.14
ATXN3-217ENST00000553287 Q6ZRX8 168 aa1.7□□□□□ -2.14
ATXN3-217ENST00000553287 SIGMAR1Q99720 223 aa1.7□□□□□ -2.14
ATXN3-217ENST00000553287 S100PP25815 95 aa1.69□□□□□ -2.14
ATXN3-217ENST00000553287 DDTP30046 118 aa1.69□□□□□ -2.14
ATXN3-217ENST00000553287 COX17Q14061 63 aa1.69□□□□□ -2.14
ATXN3-217ENST00000553287 LINC00299Q6ZSB3 139 aa1.69□□□□□ -2.14
ATXN3-217ENST00000553287 COMMD7Q86VX2 200 aa1.69□□□□□ -2.14
ATXN3-217ENST00000553287 TRBV20-1A0A075B6N2 111 aa1.68□□□□□ -2.14
ATXN3-217ENST00000553287 C11orf86A6NJI1 115 aa1.68□□□□□ -2.14
ATXN3-217ENST00000553287 H3BRM9 83 aa1.68□□□□□ -2.14
ATXN3-217ENST00000553287 SMIM6P0DI80 62 aa1.68□□□□□ -2.14
ATXN3-217ENST00000553287 NPC2P61916 151 aa1.68□□□□□ -2.14
ATXN3-217ENST00000553287 PMCHL1Q16048 86 aa1.68□□□□□ -2.14
ATXN3-217ENST00000553287 LUZP6Q538Z0 58 aa1.68□□□□□ -2.14
ATXN3-217ENST00000553287 MEIG1Q5JSS6 88 aa1.68□□□□□ -2.14
ATXN3-217ENST00000553287 TMEM170BQ5T4T1 132 aa1.68□□□□□ -2.14
ATXN3-217ENST00000553287 Q96NJ1 140 aa1.68□□□□□ -2.14
ATXN3-217ENST00000553287 DSTQ03001 7570 aaKnown RBP1.67□□□□□ -2.14
ATXN3-217ENST00000553287 TRAV23DV6A0A075B6W5 121 aa1.67□□□□□ -2.14
ATXN3-217ENST00000553287 IGLC3P0DOY3 106 aa1.67□□□□□ -2.14
ATXN3-217ENST00000553287 SMIM20Q8N5G0 67 aa1.67□□□□□ -2.14
ATXN3-217ENST00000553287 VPS25Q9BRG1 176 aa1.67□□□□□ -2.14
ATXN3-217ENST00000553287 LOC107984156A0A0G2JMH3 177 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 A6NN06 94 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 LINC00587B1AMM8 73 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 ZNF73O43830 326 aaPredicted RBP1.66□□□□□ -2.14
ATXN3-217ENST00000553287 S100A8P05109 93 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 SPRR2EP22531 72 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 SPRR2BP35325 72 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 SPRR2AP35326 72 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 IFITM2Q01629 132 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 S100A7L2Q5SY68 101 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 SCGB1D4Q6XE38 83 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 ARL17AQ8IVW1 177 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 C12orf57Q99622 126 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 KRTAP2-1Q9BYU5 128 aa1.66□□□□□ -2.14
ATXN3-217ENST00000553287 PRO1933Q9H354 126 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms