RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 LCE2CQ5TA81 110 aa3.12□□□□□ -1.91
LIMA1-214ENST00000552783 H3BQ85 93 aa3.12□□□□□ -1.91
LIMA1-214ENST00000552783 TNP2Q05952 138 aa3.11□□□□□ -1.91
LIMA1-214ENST00000552783 C1orf137Q5JT78 98 aa3.11□□□□□ -1.91
LIMA1-214ENST00000552783 KCNQ1DNQ9H478 68 aa3.11□□□□□ -1.91
LIMA1-214ENST00000552783 V9GYY9 64 aa3.11□□□□□ -1.91
LIMA1-214ENST00000552783 TENM2Q9NT68 2774 aa3.11□□□□□ -1.91
LIMA1-214ENST00000552783 TRAV22A0A0B4J277 110 aa3.11□□□□□ -1.91
LIMA1-214ENST00000552783 KRTAP4-16G5E9R7 235 aaPredicted RBP3.11□□□□□ -1.91
LIMA1-214ENST00000552783 CASC10Q5T4H9 136 aa3.11□□□□□ -1.91
LIMA1-214ENST00000552783 CMYA5Q8N3K9 4069 aa3.11□□□□□ -1.91
LIMA1-214ENST00000552783 A8MUN3 132 aa3.1□□□□□ -1.91
LIMA1-214ENST00000552783 Q6ZRX8 168 aa3.1□□□□□ -1.91
LIMA1-214ENST00000552783 DNAH9Q9NYC9 4486 aa3.1□□□□□ -1.91
LIMA1-214ENST00000552783 RPL37AP61513 92 aaKnown RBP3.1□□□□□ -1.91
LIMA1-214ENST00000552783 Q1T7F1 81 aa3.1□□□□□ -1.91
LIMA1-214ENST00000552783 LINC01556Q5JQF7 62 aa3.1□□□□□ -1.91
LIMA1-214ENST00000552783 WFDC13Q8IUB5 93 aa3.1□□□□□ -1.91
LIMA1-214ENST00000552783 Q8NBF4 154 aa3.1□□□□□ -1.91
LIMA1-214ENST00000552783 PRLHP81277 87 aa3.09□□□□□ -1.91
LIMA1-214ENST00000552783 LINC00588Q9Y4M8 146 aa3.09□□□□□ -1.92
LIMA1-214ENST00000552783 PRR15Q8IV56 129 aa3.08□□□□□ -1.92
LIMA1-214ENST00000552783 IGLV1-50A0A075B6I6 118 aa3.08□□□□□ -1.92
LIMA1-214ENST00000552783 SPRR4Q96PI1 79 aa3.08□□□□□ -1.92
LIMA1-214ENST00000552783 HCG22E2RYF7 251 aa3.07□□□□□ -1.92
LIMA1-214ENST00000552783 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
LIMA1-214ENST00000552783 MRPL55Q7Z7F7 128 aaKnown RBP3.07□□□□□ -1.92
LIMA1-214ENST00000552783 LINC00476Q8WZB0 136 aa3.07□□□□□ -1.92
LIMA1-214ENST00000552783 Q5VV11 94 aa3.07□□□□□ -1.92
LIMA1-214ENST00000552783 DHRS4-AS1Q9P1J3 65 aa3.07□□□□□ -1.92
LIMA1-214ENST00000552783 DNAH7Q8WXX0 4024 aa3.07□□□□□ -1.92
LIMA1-214ENST00000552783 H3BNG1 76 aa3.06□□□□□ -1.92
LIMA1-214ENST00000552783 CHTF8P0CG12 524 aa3.06□□□□□ -1.92
LIMA1-214ENST00000552783 SPRR1AP35321 89 aa3.06□□□□□ -1.92
LIMA1-214ENST00000552783 IGFL1Q6UW32 110 aa3.06□□□□□ -1.92
LIMA1-214ENST00000552783 FRAS1Q86XX4 4008 aa3.06□□□□□ -1.92
LIMA1-214ENST00000552783 UBE2AP49459 152 aa3.06□□□□□ -1.92
LIMA1-214ENST00000552783 LINC00208Q96KT6 92 aa3.06□□□□□ -1.92
LIMA1-214ENST00000552783 A0A087WSZ3 146 aa3.06□□□□□ -1.92
LIMA1-214ENST00000552783 CYP4F30PQ9H0H9 118 aa3.06□□□□□ -1.92
LIMA1-214ENST00000552783 REG3GQ6UW15 175 aa3.05□□□□□ -1.92
LIMA1-214ENST00000552783 DNAH10OSP0CZ25 163 aa3.05□□□□□ -1.92
LIMA1-214ENST00000552783 KRTAP21-3Q3LHN1 58 aa3.04□□□□□ -1.92
LIMA1-214ENST00000552783 KRTAP29-1A8MX34 341 aaPredicted RBP3.04□□□□□ -1.92
LIMA1-214ENST00000552783 K7EIL1 84 aa3.04□□□□□ -1.92
LIMA1-214ENST00000552783 KRTAP11-1Q8IUC1 163 aa3.04□□□□□ -1.92
LIMA1-214ENST00000552783 Q8N9P0 234 aaPredicted RBP3.04□□□□□ -1.92
LIMA1-214ENST00000552783 HUWE1Q7Z6Z7 4374 aaKnown RBP3.04□□□□□ -1.92
LIMA1-214ENST00000552783 C16orf90A8MZG2 172 aa3.04□□□□□ -1.92
LIMA1-214ENST00000552783 H0Y9J4 135 aa3.04□□□□□ -1.92
LIMA1-214ENST00000552783 B9D2Q9BPU9 175 aa3.04□□□□□ -1.92
LIMA1-214ENST00000552783 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
LIMA1-214ENST00000552783 LCA10Q71F78 164 aa3.03□□□□□ -1.92
LIMA1-214ENST00000552783 IGLV9-49A0A0B4J1Y8 123 aa3.03□□□□□ -1.92
LIMA1-214ENST00000552783 CNBPP62633 177 aaKnown RBP3.03□□□□□ -1.92
LIMA1-214ENST00000552783 PHF5AQ7RTV0 110 aaKnown RBP3.03□□□□□ -1.92
LIMA1-214ENST00000552783 DNAH3Q8TD57 4116 aa3.03□□□□□ -1.92
LIMA1-214ENST00000552783 A0A1B0GW54 56 aa3.02□□□□□ -1.93
LIMA1-214ENST00000552783 CHKB-CPT1BH3BT56 60 aa3.02□□□□□ -1.93
LIMA1-214ENST00000552783 TLX1NBP0CAT3 122 aa3.02□□□□□ -1.93
LIMA1-214ENST00000552783 H0Y9P7 68 aa3.02□□□□□ -1.93
LIMA1-214ENST00000552783 NDUFS5O43920 106 aa3.02□□□□□ -1.93
LIMA1-214ENST00000552783 PRR15LQ9BU68 103 aa3.02□□□□□ -1.93
LIMA1-214ENST00000552783 PLA2G2DQ9UNK4 145 aa3.02□□□□□ -1.93
LIMA1-214ENST00000552783 IGLV5-37A0A075B6J1 123 aa3.01□□□□□ -1.93
LIMA1-214ENST00000552783 SPTSSBQ8NFR3 76 aa3.01□□□□□ -1.93
LIMA1-214ENST00000552783 MP68P56378 58 aa3.01□□□□□ -1.93
LIMA1-214ENST00000552783 CASC2Q6XLA1 102 aa3□□□□□ -1.93
LIMA1-214ENST00000552783 C9orf163Q8N9P6 203 aa3□□□□□ -1.93
LIMA1-214ENST00000552783 KRTAP1-5Q9BYS1 174 aa3□□□□□ -1.93
LIMA1-214ENST00000552783 PCOTHQ58A44 107 aa3□□□□□ -1.93
LIMA1-214ENST00000552783 NDUFB1O75438 58 aa2.99□□□□□ -1.93
LIMA1-214ENST00000552783 C14orf177Q52M58 125 aa2.99□□□□□ -1.93
LIMA1-214ENST00000552783 CDK2AP2O75956 126 aa2.99□□□□□ -1.93
LIMA1-214ENST00000552783 SPINK6Q6UWN8 80 aa2.99□□□□□ -1.93
LIMA1-214ENST00000552783 COA5Q86WW8 74 aa2.99□□□□□ -1.93
LIMA1-214ENST00000552783 MDFIQ99750 246 aa2.99□□□□□ -1.93
LIMA1-214ENST00000552783 LINC00472Q9H8W2 130 aa2.99□□□□□ -1.93
LIMA1-214ENST00000552783 TGP01266 2768 aa2.98□□□□□ -1.93
LIMA1-214ENST00000552783 CD164Q04900 197 aa2.98□□□□□ -1.93
LIMA1-214ENST00000552783 DNAH8Q96JB1 4490 aa2.98□□□□□ -1.93
LIMA1-214ENST00000552783 IGLV8-61A0A075B6I0 122 aa2.98□□□□□ -1.93
LIMA1-214ENST00000552783 SPAG11AQ6PDA7 123 aa2.98□□□□□ -1.93
LIMA1-214ENST00000552783 SPANXA2-OT1Q8N9U9 137 aa2.98□□□□□ -1.93
LIMA1-214ENST00000552783 DNHD1Q96M86 4753 aa2.97□□□□□ -1.93
LIMA1-214ENST00000552783 MMP24-AS1A0A0U1RRL7 71 aa2.97□□□□□ -1.93
LIMA1-214ENST00000552783 A6NED7 52 aa2.97□□□□□ -1.93
LIMA1-214ENST00000552783 A8MWP4 228 aa2.97□□□□□ -1.93
LIMA1-214ENST00000552783 RBM12B-AS1Q9P1G2 102 aa2.97□□□□□ -1.93
LIMA1-214ENST00000552783 PLECQ15149 4684 aaKnown RBP2.97□□□□□ -1.93
LIMA1-214ENST00000552783 A6NN06 94 aa2.97□□□□□ -1.93
LIMA1-214ENST00000552783 LIMD2Q9BT23 127 aa2.97□□□□□ -1.93
LIMA1-214ENST00000552783 ANAPC11Q9NYG5 84 aa2.97□□□□□ -1.93
LIMA1-214ENST00000552783 SPINK7P58062 85 aa2.96□□□□□ -1.94
LIMA1-214ENST00000552783 Q75L30 129 aa2.96□□□□□ -1.94
LIMA1-214ENST00000552783 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
LIMA1-214ENST00000552783 IGLV7-46A0A075B6I9 117 aa2.95□□□□□ -1.94
LIMA1-214ENST00000552783 A0A087X002 238 aa2.95□□□□□ -1.94
LIMA1-214ENST00000552783 NBDYA0A0U1RRE5 68 aa2.95□□□□□ -1.94
LIMA1-214ENST00000552783 LOC101927531A0A1B0GV80 90 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms