RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 MGAM2Q2M2H8 2515 aa6.48□□□□□ -1.37
RFX4-210ENST00000552773 NBEAL1Q6ZS30 2694 aa6.48□□□□□ -1.37
RFX4-210ENST00000552773 HCG22E2RYF7 251 aa6.47□□□□□ -1.37
RFX4-210ENST00000552773 C5orf47Q569G3 176 aa6.47□□□□□ -1.37
RFX4-210ENST00000552773 C1orf134Q5TEV5 83 aa6.47□□□□□ -1.37
RFX4-210ENST00000552773 Q6ZR54 194 aa6.47□□□□□ -1.37
RFX4-210ENST00000552773 A0A087WSZ3 146 aa6.46□□□□□ -1.37
RFX4-210ENST00000552773 H7BZZ5 65 aa6.46□□□□□ -1.37
RFX4-210ENST00000552773 RTL8CO15255 209 aa6.46□□□□□ -1.37
RFX4-210ENST00000552773 Q8N9L7 120 aa6.46□□□□□ -1.37
RFX4-210ENST00000552773 SERP1Q9Y6X1 66 aa6.46□□□□□ -1.37
RFX4-210ENST00000552773 HUWE1Q7Z6Z7 4374 aaKnown RBP6.46□□□□□ -1.37
RFX4-210ENST00000552773 ANK2Q01484 3957 aa6.46□□□□□ -1.38
RFX4-210ENST00000552773 DSCR10P59022 87 aa6.45□□□□□ -1.38
RFX4-210ENST00000552773 KRTAP13-1Q8IUC0 172 aa6.45□□□□□ -1.38
RFX4-210ENST00000552773 NDUFB1O75438 58 aa6.45□□□□□ -1.38
RFX4-210ENST00000552773 PLAC8Q9NZF1 115 aa6.44□□□□□ -1.38
RFX4-210ENST00000552773 IGLV5-52A0A0A0MRZ9 124 aa6.43□□□□□ -1.38
RFX4-210ENST00000552773 LINC00483Q53H64 154 aa6.43□□□□□ -1.38
RFX4-210ENST00000552773 A0A0U1RQV1 116 aa6.42□□□□□ -1.38
RFX4-210ENST00000552773 K7EQZ3 153 aa6.42□□□□□ -1.38
RFX4-210ENST00000552773 CYSTM1Q9H1C7 97 aa6.42□□□□□ -1.38
RFX4-210ENST00000552773 SNURFQ9Y675 71 aa6.42□□□□□ -1.38
RFX4-210ENST00000552773 LCE6AA0A183 80 aa6.42□□□□□ -1.38
RFX4-210ENST00000552773 A8MWP4 228 aa6.42□□□□□ -1.38
RFX4-210ENST00000552773 H3BPC8 53 aa6.42□□□□□ -1.38
RFX4-210ENST00000552773 MP68P56378 58 aa6.42□□□□□ -1.38
RFX4-210ENST00000552773 ZNF861PO60384 105 aa6.4□□□□□ -1.38
RFX4-210ENST00000552773 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.4□□□□□ -1.38
RFX4-210ENST00000552773 STAB2Q8WWQ8 2551 aa6.4□□□□□ -1.38
RFX4-210ENST00000552773 KRTAP11-1Q8IUC1 163 aa6.39□□□□□ -1.39
RFX4-210ENST00000552773 PRR15Q8IV56 129 aa6.39□□□□□ -1.39
RFX4-210ENST00000552773 FAM30AQ9NZY2 134 aa6.39□□□□□ -1.39
RFX4-210ENST00000552773 KRTAP21-3Q3LHN1 58 aa6.38□□□□□ -1.39
RFX4-210ENST00000552773 LINC00472Q9H8W2 130 aa6.38□□□□□ -1.39
RFX4-210ENST00000552773 DNAH1Q9P2D7 4330 aa6.38□□□□□ -1.39
RFX4-210ENST00000552773 CDK2AP2O75956 126 aa6.37□□□□□ -1.39
RFX4-210ENST00000552773 CASC2Q6XLA1 102 aa6.37□□□□□ -1.39
RFX4-210ENST00000552773 LY6G6CO95867 125 aa6.36□□□□□ -1.39
RFX4-210ENST00000552773 WWC2-AS2Q96NR7 200 aa6.36□□□□□ -1.39
RFX4-210ENST00000552773 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
RFX4-210ENST00000552773 SMIM26A0A096LP01 95 aa6.36□□□□□ -1.39
RFX4-210ENST00000552773 PANO1I0J062 215 aa6.36□□□□□ -1.39
RFX4-210ENST00000552773 MOBPQ13875 183 aa6.35□□□□□ -1.39
RFX4-210ENST00000552773 TP53AIP1Q9HCN2 124 aa6.35□□□□□ -1.39
RFX4-210ENST00000552773 IGLV9-49A0A0B4J1Y8 123 aa6.34□□□□□ -1.39
RFX4-210ENST00000552773 hDV103S1A0JD37 113 aa6.33□□□□□ -1.4
RFX4-210ENST00000552773 CD164Q04900 197 aa6.33□□□□□ -1.4
RFX4-210ENST00000552773 KRTAP29-1A8MX34 341 aaPredicted RBP6.33□□□□□ -1.4
RFX4-210ENST00000552773 IGLV7-43P04211 117 aa6.33□□□□□ -1.4
RFX4-210ENST00000552773 WFDC13Q8IUB5 93 aa6.33□□□□□ -1.4
RFX4-210ENST00000552773 H3BS24 57 aa6.32□□□□□ -1.4
RFX4-210ENST00000552773 SSBP3-AS1Q7Z2R9 100 aa6.32□□□□□ -1.4
RFX4-210ENST00000552773 DNAH9Q9NYC9 4486 aa6.32□□□□□ -1.4
RFX4-210ENST00000552773 DEFB116Q30KQ4 102 aa6.31□□□□□ -1.4
RFX4-210ENST00000552773 DYNC2H1Q8NCM8 4307 aaKnown RBP6.31□□□□□ -1.4
RFX4-210ENST00000552773 A0A0G2JQZ4 141 aa6.3□□□□□ -1.4
RFX4-210ENST00000552773 ZCCHC13Q8WW36 166 aaKnown RBP6.3□□□□□ -1.4
RFX4-210ENST00000552773 SPANXA2-OT1Q8N9U9 137 aa6.27□□□□□ -1.41
RFX4-210ENST00000552773 H0Y9P7 68 aa6.26□□□□□ -1.41
RFX4-210ENST00000552773 CYP4F30PQ9H0H9 118 aa6.26□□□□□ -1.41
RFX4-210ENST00000552773 COL7A1Q02388 2944 aa6.26□□□□□ -1.41
RFX4-210ENST00000552773 TRAV22A0A0B4J277 110 aa6.26□□□□□ -1.41
RFX4-210ENST00000552773 MMP24-AS1A0A0U1RRL7 71 aa6.26□□□□□ -1.41
RFX4-210ENST00000552773 A0A1B0GVX0 72 aa6.26□□□□□ -1.41
RFX4-210ENST00000552773 ASB16-AS1Q495Z4 193 aa6.25□□□□□ -1.41
RFX4-210ENST00000552773 FAM229BQ4G0N7 80 aa6.25□□□□□ -1.41
RFX4-210ENST00000552773 LINC00208Q96KT6 92 aa6.25□□□□□ -1.41
RFX4-210ENST00000552773 C8orf17Q9NRJ1 99 aa6.24□□□□□ -1.41
RFX4-210ENST00000552773 C8orf87E5RJ46 101 aa6.23□□□□□ -1.41
RFX4-210ENST00000552773 OXTP01178 125 aa6.23□□□□□ -1.41
RFX4-210ENST00000552773 Q96NJ1 140 aa6.23□□□□□ -1.41
RFX4-210ENST00000552773 FAM229AH3BQW9 127 aa6.23□□□□□ -1.41
RFX4-210ENST00000552773 Q6ZSA8 131 aa6.22□□□□□ -1.41
RFX4-210ENST00000552773 C1orf64Q8NEQ6 169 aa6.22□□□□□ -1.41
RFX4-210ENST00000552773 CIRBP-AS1Q8TBR5 109 aa6.22□□□□□ -1.41
RFX4-210ENST00000552773 Q5XG85 94 aa6.21□□□□□ -1.42
RFX4-210ENST00000552773 HRCT1Q6UXD1 115 aa6.21□□□□□ -1.42
RFX4-210ENST00000552773 MRPL34Q9BQ48 92 aaKnown RBP6.21□□□□□ -1.42
RFX4-210ENST00000552773 V9GYY9 64 aa6.21□□□□□ -1.42
RFX4-210ENST00000552773 IGHV6-1A0A0B4J1U7 121 aa6.2□□□□□ -1.42
RFX4-210ENST00000552773 LIMD2Q9BT23 127 aa6.2□□□□□ -1.42
RFX4-210ENST00000552773 NDUFS5O43920 106 aa6.17□□□□□ -1.42
RFX4-210ENST00000552773 LINC00336Q6ZUF6 198 aa6.17□□□□□ -1.42
RFX4-210ENST00000552773 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
RFX4-210ENST00000552773 VPS13DQ5THJ4 4388 aa6.15□□□□□ -1.42
RFX4-210ENST00000552773 LOC101927531A0A1B0GV80 90 aa6.15□□□□□ -1.42
RFX4-210ENST00000552773 C4orf26Q17RF5 130 aa6.15□□□□□ -1.42
RFX4-210ENST00000552773 FP248Q71RG6 208 aaPredicted RBP6.14□□□□□ -1.43
RFX4-210ENST00000552773 IGLV7-46A0A075B6I9 117 aa6.14□□□□□ -1.43
RFX4-210ENST00000552773 C1orf195Q5TG92 126 aa6.14□□□□□ -1.43
RFX4-210ENST00000552773 ANAPC11Q9NYG5 84 aa6.14□□□□□ -1.43
RFX4-210ENST00000552773 PLECQ15149 4684 aaKnown RBP6.13□□□□□ -1.43
RFX4-210ENST00000552773 DNAH10Q8IVF4 4471 aa6.13□□□□□ -1.43
RFX4-210ENST00000552773 Q1T7F1 81 aa6.13□□□□□ -1.43
RFX4-210ENST00000552773 CSMD3Q7Z407 3707 aa6.13□□□□□ -1.43
RFX4-210ENST00000552773 KRTAP10-1P60331 282 aa6.12□□□□□ -1.43
RFX4-210ENST00000552773 TENM2Q9NT68 2774 aa6.12□□□□□ -1.43
RFX4-210ENST00000552773 SPINK6Q6UWN8 80 aa6.11□□□□□ -1.43
RFX4-210ENST00000552773 DNAH7Q8WXX0 4024 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms