RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 FASNP49327 2511 aaKnown RBP3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 A0A0U1RQV1 116 aa3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 C3orf84H3BNL1 204 aa3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 Q5XG85 94 aa3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 REG3GQ6UW15 175 aa3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 VWFP04275 2813 aa3.8□□□□□ -1.8
CHMP4A-210ENST00000552620 LCE6AA0A183 80 aa3.79□□□□□ -1.8
CHMP4A-210ENST00000552620 FAM168BA1KXE4 195 aa3.79□□□□□ -1.8
CHMP4A-210ENST00000552620 UBE2BP63146 152 aa3.79□□□□□ -1.8
CHMP4A-210ENST00000552620 KRTAP7-1Q8IUC3 87 aa3.79□□□□□ -1.8
CHMP4A-210ENST00000552620 ST20-AS1Q8NBB2 130 aa3.79□□□□□ -1.8
CHMP4A-210ENST00000552620 IGLV8-61A0A075B6I0 122 aa3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 CNBPP62633 177 aaKnown RBP3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 C4orf26Q17RF5 130 aa3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 C14orf177Q52M58 125 aa3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 CASC10Q5T4H9 136 aa3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 PKIGQ9Y2B9 76 aa3.78□□□□□ -1.8
CHMP4A-210ENST00000552620 C16orf90A8MZG2 172 aa3.77□□□□□ -1.81
CHMP4A-210ENST00000552620 Q8N9L7 120 aa3.77□□□□□ -1.81
CHMP4A-210ENST00000552620 HELZ2Q9BYK8 2649 aaKnown RBP3.77□□□□□ -1.81
CHMP4A-210ENST00000552620 TEP1Q99973 2627 aaKnown RBP3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 KRTAP29-1A8MX34 341 aaPredicted RBP3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 H0Y9J4 135 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 DSCR10P59022 87 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 HRCT1Q6UXD1 115 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 NOTCH2NLQ7Z3S9 236 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 OTOGQ6ZRI0 2925 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 DNAH3Q8TD57 4116 aa3.76□□□□□ -1.81
CHMP4A-210ENST00000552620 DNAH1Q9P2D7 4330 aa3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 CMYA5Q8N3K9 4069 aa3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 NSD1Q96L73 2696 aaPredicted RBP3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 IGLV7-46A0A075B6I9 117 aa3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 A0A087X002 238 aa3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 SPRR1BP22528 89 aa3.75□□□□□ -1.81
CHMP4A-210ENST00000552620 HCG22E2RYF7 251 aa3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 K7EIL1 84 aa3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 IGFL1Q6UW32 110 aa3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 ZCCHC13Q8WW36 166 aaKnown RBP3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 HIGD2AQ9BW72 106 aa3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 ATRQ13535 2644 aa3.74□□□□□ -1.81
CHMP4A-210ENST00000552620 HIVEP1P15822 2718 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 A0A096LNI7 61 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 A0A1W2PNN7 141 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 PSCAO43653 123 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 NDUFB1O75438 58 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 UBE2AP49459 152 aa3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 FP248Q71RG6 208 aaPredicted RBP3.73□□□□□ -1.81
CHMP4A-210ENST00000552620 TENM1Q9UKZ4 2725 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 TRRAPQ9Y4A5 3859 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 H3BPC8 53 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 K7EQZ3 153 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 LINC00474Q9P2X8 69 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
CHMP4A-210ENST00000552620 MP68P56378 58 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 UBE2DNLQ8IWF7 75 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 C9orf163Q8N9P6 203 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 CYP4F30PQ9H0H9 118 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 APLNQ9ULZ1 77 aa3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 HUWE1Q7Z6Z7 4374 aaKnown RBP3.71□□□□□ -1.82
CHMP4A-210ENST00000552620 A0A087WSZ3 146 aa3.7□□□□□ -1.82
CHMP4A-210ENST00000552620 IGKV2-24A0A0C4DH68 120 aa3.7□□□□□ -1.82
CHMP4A-210ENST00000552620 PRLHP81277 87 aa3.7□□□□□ -1.82
CHMP4A-210ENST00000552620 B9D2Q9BPU9 175 aa3.7□□□□□ -1.82
CHMP4A-210ENST00000552620 hDV103S1A0JD37 113 aa3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 A8MWP4 228 aa3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 PRB2P02812 416 aaPredicted RBP3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 CD164Q04900 197 aa3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 C1orf195Q5TG92 126 aa3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 PHF5AQ7RTV0 110 aaKnown RBP3.69□□□□□ -1.82
CHMP4A-210ENST00000552620 HECTD1Q9ULT8 2610 aa3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 RPL37AP61513 92 aaKnown RBP3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 PRR15Q8IV56 129 aa3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 KRTAP1-5Q9BYS1 174 aa3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 LINC00472Q9H8W2 130 aa3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 ANK2Q01484 3957 aa3.68□□□□□ -1.82
CHMP4A-210ENST00000552620 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 LRCOL1A6NCL2 159 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 Q1T7F1 81 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 FAM229BQ4G0N7 80 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 CASC2Q6XLA1 102 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
CHMP4A-210ENST00000552620 PKD1L1Q8TDX9 2849 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 TRAV22A0A0B4J277 110 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 NBDYA0A0U1RRE5 68 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 WFDC13Q8IUB5 93 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 KRTAP13-1Q8IUC0 172 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 C1orf64Q8NEQ6 169 aa3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 DYNC2H1Q8NCM8 4307 aaKnown RBP3.66□□□□□ -1.82
CHMP4A-210ENST00000552620 A0A0G2JQZ4 141 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 NUPR2A6NF83 97 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 CHTF8P0CG12 524 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 DEFB116Q30KQ4 102 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 F8P00451 2351 aa3.65□□□□□ -1.83
CHMP4A-210ENST00000552620 TENM3Q9P273 2699 aa3.64□□□□□ -1.83
CHMP4A-210ENST00000552620 H0Y9P7 68 aa3.64□□□□□ -1.83
CHMP4A-210ENST00000552620 TP53AIP1Q9HCN2 124 aa3.64□□□□□ -1.83
CHMP4A-210ENST00000552620 ZNF706Q9Y5V0 76 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms