RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
CACNB3-223ENST00000552480 HAMPP81172 84 aa7.75□□□□□ -1.17
CACNB3-223ENST00000552480 ZNF706Q9Y5V0 76 aaPredicted RBP7.74□□□□□ -1.17
CACNB3-223ENST00000552480 F8WEM9 126 aa7.73□□□□□ -1.17
CACNB3-223ENST00000552480 BIRC6Q9NR09 4857 aa7.72□□□□□ -1.17
CACNB3-223ENST00000552480 SPRR4Q96PI1 79 aa7.72□□□□□ -1.17
CACNB3-223ENST00000552480 IGLV8-61A0A075B6I0 122 aa7.71□□□□□ -1.18
CACNB3-223ENST00000552480 EPPK1P58107 5090 aaKnown RBP7.7□□□□□ -1.18
CACNB3-223ENST00000552480 LINC00483Q53H64 154 aa7.7□□□□□ -1.18
CACNB3-223ENST00000552480 LINC00846Q9NV44 126 aa7.68□□□□□ -1.18
CACNB3-223ENST00000552480 XGP55808 180 aa7.67□□□□□ -1.18
CACNB3-223ENST00000552480 KRTAP17-1Q9BYP8 105 aa7.67□□□□□ -1.18
CACNB3-223ENST00000552480 SIGMAR1Q99720 223 aa7.66□□□□□ -1.18
CACNB3-223ENST00000552480 Q6JHZ5 121 aa7.65□□□□□ -1.18
CACNB3-223ENST00000552480 IGFL1Q6UW32 110 aa7.65□□□□□ -1.18
CACNB3-223ENST00000552480 DYNC1H1Q14204 4646 aaKnown RBP7.65□□□□□ -1.19
CACNB3-223ENST00000552480 A0A1B0GW54 56 aa7.64□□□□□ -1.19
CACNB3-223ENST00000552480 A0A1W2PNM2 257 aa7.64□□□□□ -1.19
CACNB3-223ENST00000552480 MT-ATP8P03928 68 aa7.64□□□□□ -1.19
CACNB3-223ENST00000552480 LINC00643Q86TS7 51 aa7.64□□□□□ -1.19
CACNB3-223ENST00000552480 Q8NBF4 154 aa7.64□□□□□ -1.19
CACNB3-223ENST00000552480 RPL37AP61513 92 aaKnown RBP7.63□□□□□ -1.19
CACNB3-223ENST00000552480 UBL5Q9BZL1 73 aa7.63□□□□□ -1.19
CACNB3-223ENST00000552480 LRP1BQ9NZR2 4599 aa7.63□□□□□ -1.19
CACNB3-223ENST00000552480 IGLV9-49A0A0B4J1Y8 123 aa7.6□□□□□ -1.19
CACNB3-223ENST00000552480 C9orf153Q5TBE3 101 aa7.6□□□□□ -1.19
CACNB3-223ENST00000552480 A0A0G2JQZ4 141 aa7.59□□□□□ -1.19
CACNB3-223ENST00000552480 CRYGAP11844 174 aa7.59□□□□□ -1.19
CACNB3-223ENST00000552480 Q6Q795 121 aa7.59□□□□□ -1.19
CACNB3-223ENST00000552480 Q6ZVQ6 151 aa7.59□□□□□ -1.19
CACNB3-223ENST00000552480 ANAPC11Q9NYG5 84 aa7.59□□□□□ -1.19
CACNB3-223ENST00000552480 PKHD1P08F94 4074 aa7.58□□□□□ -1.2
CACNB3-223ENST00000552480 SMR3BP02814 79 aaPredicted RBP7.58□□□□□ -1.2
CACNB3-223ENST00000552480 ATP5EP2Q5VTU8 51 aa7.58□□□□□ -1.2
CACNB3-223ENST00000552480 TRBV7-7A0A0K0K1E9 115 aa7.57□□□□□ -1.2
CACNB3-223ENST00000552480 MOBPQ13875 183 aa7.57□□□□□ -1.2
CACNB3-223ENST00000552480 FAM229BQ4G0N7 80 aa7.56□□□□□ -1.2
CACNB3-223ENST00000552480 SPINK6Q6UWN8 80 aa7.56□□□□□ -1.2
CACNB3-223ENST00000552480 NREPQ16612 68 aa7.55□□□□□ -1.2
CACNB3-223ENST00000552480 IGKV3D-7A0A0C4DH55 119 aa7.54□□□□□ -1.2
CACNB3-223ENST00000552480 IMUPQ9GZP8 106 aa7.54□□□□□ -1.2
CACNB3-223ENST00000552480 APOBP04114 4563 aaKnown RBP7.54□□□□□ -1.2
CACNB3-223ENST00000552480 CDK2AP2O75956 126 aa7.53□□□□□ -1.2
CACNB3-223ENST00000552480 KRTAP1-4P0C5Y4 121 aa7.53□□□□□ -1.2
CACNB3-223ENST00000552480 KRTAP10-4P60372 401 aaPredicted RBP7.53□□□□□ -1.2
CACNB3-223ENST00000552480 A0A087WSZ3 146 aa7.52□□□□□ -1.21
CACNB3-223ENST00000552480 SCGB1A1P11684 91 aa7.52□□□□□ -1.21
CACNB3-223ENST00000552480 SSBP3-AS1Q7Z2R9 100 aa7.52□□□□□ -1.21
CACNB3-223ENST00000552480 CXCL6P80162 114 aa7.51□□□□□ -1.21
CACNB3-223ENST00000552480 KRTAP13-2Q52LG2 175 aa7.5□□□□□ -1.21
CACNB3-223ENST00000552480 A0A087X002 238 aa7.49□□□□□ -1.21
CACNB3-223ENST00000552480 SRRM2Q9UQ35 2752 aaKnown RBP7.49□□□□□ -1.21
CACNB3-223ENST00000552480 PLA2G1BP04054 148 aaKnown RBP7.48□□□□□ -1.21
CACNB3-223ENST00000552480 VPS13BQ7Z7G8 4022 aa7.48□□□□□ -1.21
CACNB3-223ENST00000552480 FAM229AH3BQW9 127 aa7.47□□□□□ -1.21
CACNB3-223ENST00000552480 BPY2O14599 106 aa7.47□□□□□ -1.21
CACNB3-223ENST00000552480 CD164Q04900 197 aa7.47□□□□□ -1.21
CACNB3-223ENST00000552480 HRCT1Q6UXD1 115 aa7.47□□□□□ -1.21
CACNB3-223ENST00000552480 HIST1H4AP62805 103 aaKnown RBP7.45□□□□□ -1.22
CACNB3-223ENST00000552480 SS18L2Q9UHA2 77 aa7.45□□□□□ -1.22
CACNB3-223ENST00000552480 A0A087WVE0 104 aa7.42□□□□□ -1.22
CACNB3-223ENST00000552480 Q5VSD8 79 aa7.42□□□□□ -1.22
CACNB3-223ENST00000552480 RYR1P21817 5038 aa7.42□□□□□ -1.22
CACNB3-223ENST00000552480 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
CACNB3-223ENST00000552480 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
CACNB3-223ENST00000552480 TYMSOSQ8TAI1 123 aa7.41□□□□□ -1.22
CACNB3-223ENST00000552480 LINC00472Q9H8W2 130 aa7.41□□□□□ -1.22
CACNB3-223ENST00000552480 IGKV4-1P06312 121 aa7.4□□□□□ -1.22
CACNB3-223ENST00000552480 DSCR10P59022 87 aa7.4□□□□□ -1.22
CACNB3-223ENST00000552480 PKHD1L1Q86WI1 4243 aa7.4□□□□□ -1.22
CACNB3-223ENST00000552480 J3KT08 172 aa7.39□□□□□ -1.23
CACNB3-223ENST00000552480 PRR26Q8N8Z3 221 aa7.39□□□□□ -1.23
CACNB3-223ENST00000552480 DEFB116Q30KQ4 102 aa7.38□□□□□ -1.23
CACNB3-223ENST00000552480 Q8N9L7 120 aa7.38□□□□□ -1.23
CACNB3-223ENST00000552480 Q96NJ1 140 aa7.38□□□□□ -1.23
CACNB3-223ENST00000552480 PCLOQ9Y6V0 5065 aa7.37□□□□□ -1.23
CACNB3-223ENST00000552480 K7EQZ3 153 aa7.36□□□□□ -1.23
CACNB3-223ENST00000552480 ASB16-AS1Q495Z4 193 aa7.36□□□□□ -1.23
CACNB3-223ENST00000552480 Q5XG85 94 aa7.36□□□□□ -1.23
CACNB3-223ENST00000552480 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
CACNB3-223ENST00000552480 Q8N1X5 172 aa7.35□□□□□ -1.23
CACNB3-223ENST00000552480 HSPG2P98160 4391 aa7.34□□□□□ -1.23
CACNB3-223ENST00000552480 FAT1Q14517 4588 aa7.34□□□□□ -1.23
CACNB3-223ENST00000552480 A8MWP4 228 aa7.34□□□□□ -1.23
CACNB3-223ENST00000552480 PCP4P48539 62 aa7.34□□□□□ -1.23
CACNB3-223ENST00000552480 LIMD2Q9BT23 127 aa7.34□□□□□ -1.23
CACNB3-223ENST00000552480 HERC2O95714 4834 aa7.33□□□□□ -1.24
CACNB3-223ENST00000552480 ATOX1O00244 68 aa7.33□□□□□ -1.24
CACNB3-223ENST00000552480 LINC00304Q8N9R0 145 aa7.33□□□□□ -1.24
CACNB3-223ENST00000552480 SPINK1P00995 79 aa7.32□□□□□ -1.24
CACNB3-223ENST00000552480 SPAG11AQ6PDA7 123 aa7.32□□□□□ -1.24
CACNB3-223ENST00000552480 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
CACNB3-223ENST00000552480 PRR15Q8IV56 129 aa7.31□□□□□ -1.24
CACNB3-223ENST00000552480 ANAPC13Q9BS18 74 aa7.31□□□□□ -1.24
CACNB3-223ENST00000552480 NDUFB1O75438 58 aa7.3□□□□□ -1.24
CACNB3-223ENST00000552480 KIAA1109Q2LD37 5005 aa7.29□□□□□ -1.24
CACNB3-223ENST00000552480 HCG22E2RYF7 251 aa7.28□□□□□ -1.24
CACNB3-223ENST00000552480 C1orf195Q5TG92 126 aa7.27□□□□□ -1.25
CACNB3-223ENST00000552480 A0A1B0GVX0 72 aa7.26□□□□□ -1.25
CACNB3-223ENST00000552480 SMIM20Q8N5G0 67 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms