RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 Q5VSD8 79 aa6.29□□□□□ -1.4
NEK3-203ENST00000551355 GAGE2AQ6NT46 116 aa6.29□□□□□ -1.4
NEK3-203ENST00000551355 Q8N1X5 172 aa6.29□□□□□ -1.4
NEK3-203ENST00000551355 Q8N377 158 aa6.29□□□□□ -1.4
NEK3-203ENST00000551355 LAMTOR3Q9UHA4 124 aa6.29□□□□□ -1.4
NEK3-203ENST00000551355 JMJD7-PLA2G4BH0Y9G9 81 aa6.28□□□□□ -1.4
NEK3-203ENST00000551355 KRTAP10-4P60372 401 aaPredicted RBP6.28□□□□□ -1.4
NEK3-203ENST00000551355 APOBP04114 4563 aaKnown RBP6.27□□□□□ -1.41
NEK3-203ENST00000551355 F8WEM9 126 aa6.27□□□□□ -1.41
NEK3-203ENST00000551355 NDUFV3P56181 108 aaKnown RBP6.27□□□□□ -1.41
NEK3-203ENST00000551355 FAM229BQ4G0N7 80 aa6.27□□□□□ -1.41
NEK3-203ENST00000551355 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
NEK3-203ENST00000551355 MTURNQ8N3F0 131 aa6.26□□□□□ -1.41
NEK3-203ENST00000551355 RBM3P98179 157 aaKnown RBP6.24□□□□□ -1.41
NEK3-203ENST00000551355 TEN1Q86WV5 123 aa6.24□□□□□ -1.41
NEK3-203ENST00000551355 PDE6GP18545 87 aa6.23□□□□□ -1.41
NEK3-203ENST00000551355 SMIM29Q86T20 159 aa6.23□□□□□ -1.41
NEK3-203ENST00000551355 OBSCN-AS1Q96MR7 158 aa6.23□□□□□ -1.41
NEK3-203ENST00000551355 CDIP1Q9H305 208 aa6.23□□□□□ -1.41
NEK3-203ENST00000551355 IGLV8-61A0A075B6I0 122 aa6.22□□□□□ -1.41
NEK3-203ENST00000551355 CRYGAP11844 174 aa6.22□□□□□ -1.41
NEK3-203ENST00000551355 Q6JHZ5 121 aa6.22□□□□□ -1.41
NEK3-203ENST00000551355 DSCR8Q96T75 97 aa6.22□□□□□ -1.41
NEK3-203ENST00000551355 KRTAP1-4P0C5Y4 121 aa6.21□□□□□ -1.42
NEK3-203ENST00000551355 ETDBQ3ZM63 59 aa6.21□□□□□ -1.42
NEK3-203ENST00000551355 SSBP3-AS1Q7Z2R9 100 aa6.2□□□□□ -1.42
NEK3-203ENST00000551355 C3orf22Q8N5N4 141 aa6.2□□□□□ -1.42
NEK3-203ENST00000551355 Q8NBF4 154 aa6.2□□□□□ -1.42
NEK3-203ENST00000551355 VPS13BQ7Z7G8 4022 aa6.2□□□□□ -1.42
NEK3-203ENST00000551355 EPPK1P58107 5090 aaKnown RBP6.2□□□□□ -1.42
NEK3-203ENST00000551355 LOC110117498A0A087WWA1 95 aa6.19□□□□□ -1.42
NEK3-203ENST00000551355 C9orf153Q5TBE3 101 aa6.19□□□□□ -1.42
NEK3-203ENST00000551355 HSPG2P98160 4391 aa6.19□□□□□ -1.42
NEK3-203ENST00000551355 IGLV9-49A0A0B4J1Y8 123 aa6.18□□□□□ -1.42
NEK3-203ENST00000551355 TRBV7-4A0A0J9YYF1 115 aa6.18□□□□□ -1.42
NEK3-203ENST00000551355 ANAPC11Q9NYG5 84 aa6.18□□□□□ -1.42
NEK3-203ENST00000551355 A0A1B0GW54 56 aa6.16□□□□□ -1.42
NEK3-203ENST00000551355 MOBPQ13875 183 aa6.16□□□□□ -1.42
NEK3-203ENST00000551355 C14orf132Q9NPU4 83 aa6.16□□□□□ -1.42
NEK3-203ENST00000551355 RYR1P21817 5038 aa6.16□□□□□ -1.42
NEK3-203ENST00000551355 FAT1Q14517 4588 aa6.15□□□□□ -1.42
NEK3-203ENST00000551355 A0A087X002 238 aa6.15□□□□□ -1.42
NEK3-203ENST00000551355 A0A1B0GV72 72 aa6.15□□□□□ -1.42
NEK3-203ENST00000551355 H3BS24 57 aa6.15□□□□□ -1.42
NEK3-203ENST00000551355 J3QR89 54 aa6.15□□□□□ -1.42
NEK3-203ENST00000551355 Q6ZQT0 140 aa6.15□□□□□ -1.42
NEK3-203ENST00000551355 TYMSOSQ8TAI1 123 aa6.15□□□□□ -1.42
NEK3-203ENST00000551355 SRRM2Q9UQ35 2752 aaKnown RBP6.14□□□□□ -1.43
NEK3-203ENST00000551355 CCKP06307 115 aa6.14□□□□□ -1.43
NEK3-203ENST00000551355 CD164Q04900 197 aa6.14□□□□□ -1.43
NEK3-203ENST00000551355 Q6Q795 121 aa6.14□□□□□ -1.43
NEK3-203ENST00000551355 IGFL1Q6UW32 110 aa6.14□□□□□ -1.43
NEK3-203ENST00000551355 KRTAP13-2Q52LG2 175 aa6.13□□□□□ -1.43
NEK3-203ENST00000551355 KRTAP17-1Q9BYP8 105 aa6.13□□□□□ -1.43
NEK3-203ENST00000551355 KIAA1109Q2LD37 5005 aa6.12□□□□□ -1.43
NEK3-203ENST00000551355 SPAG11AQ6PDA7 123 aa6.12□□□□□ -1.43
NEK3-203ENST00000551355 PRR26Q8N8Z3 221 aa6.12□□□□□ -1.43
NEK3-203ENST00000551355 OXTP01178 125 aa6.11□□□□□ -1.43
NEK3-203ENST00000551355 ACYP1P07311 99 aa6.11□□□□□ -1.43
NEK3-203ENST00000551355 FAM240AA0A1B0GVK7 77 aa6.1□□□□□ -1.43
NEK3-203ENST00000551355 VPS25Q9BRG1 176 aa6.1□□□□□ -1.43
NEK3-203ENST00000551355 BIRC6Q9NR09 4857 aa6.09□□□□□ -1.43
NEK3-203ENST00000551355 A0A1W2PNM2 257 aa6.09□□□□□ -1.43
NEK3-203ENST00000551355 K7ERU9 68 aa6.09□□□□□ -1.43
NEK3-203ENST00000551355 SPINK1P00995 79 aa6.08□□□□□ -1.44
NEK3-203ENST00000551355 TRBV7-7A0A0K0K1E9 115 aa6.07□□□□□ -1.44
NEK3-203ENST00000551355 KRTAP10-8P60410 259 aa6.07□□□□□ -1.44
NEK3-203ENST00000551355 RPS29P62273 56 aaKnown RBP6.07□□□□□ -1.44
NEK3-203ENST00000551355 LINC00304Q8N9R0 145 aa6.07□□□□□ -1.44
NEK3-203ENST00000551355 SS18L2Q9UHA2 77 aa6.07□□□□□ -1.44
NEK3-203ENST00000551355 LIMD2Q9BT23 127 aa6.06□□□□□ -1.44
NEK3-203ENST00000551355 KRTAP4-5Q9BYR2 181 aa6.06□□□□□ -1.44
NEK3-203ENST00000551355 A0A0G2JQZ4 141 aa6.05□□□□□ -1.44
NEK3-203ENST00000551355 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
NEK3-203ENST00000551355 Q5XG85 94 aa6.05□□□□□ -1.44
NEK3-203ENST00000551355 A0A087WSZ3 146 aa6.04□□□□□ -1.44
NEK3-203ENST00000551355 HRCT1Q6UXD1 115 aa6.04□□□□□ -1.44
NEK3-203ENST00000551355 UBL5Q9BZL1 73 aa6.04□□□□□ -1.44
NEK3-203ENST00000551355 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
NEK3-203ENST00000551355 NREPQ16612 68 aa6.02□□□□□ -1.45
NEK3-203ENST00000551355 ASB16-AS1Q495Z4 193 aa6.02□□□□□ -1.45
NEK3-203ENST00000551355 XP32Q5T750 250 aa6.02□□□□□ -1.45
NEK3-203ENST00000551355 LINC00846Q9NV44 126 aa6.01□□□□□ -1.45
NEK3-203ENST00000551355 HERC2O95714 4834 aa5.99□□□□□ -1.45
NEK3-203ENST00000551355 MT1HL1P0DM35 61 aa5.99□□□□□ -1.45
NEK3-203ENST00000551355 J3KT08 172 aa5.98□□□□□ -1.45
NEK3-203ENST00000551355 Q6ZVQ6 151 aa5.98□□□□□ -1.45
NEK3-203ENST00000551355 ATP5EP2Q5VTU8 51 aa5.96□□□□□ -1.46
NEK3-203ENST00000551355 LINC00643Q86TS7 51 aa5.96□□□□□ -1.46
NEK3-203ENST00000551355 LINC00472Q9H8W2 130 aa5.96□□□□□ -1.46
NEK3-203ENST00000551355 FLG2Q5D862 2391 aaPredicted RBP5.94□□□□□ -1.46
NEK3-203ENST00000551355 BPY2O14599 106 aa5.94□□□□□ -1.46
NEK3-203ENST00000551355 CXCL6P80162 114 aa5.94□□□□□ -1.46
NEK3-203ENST00000551355 SIGMAR1Q99720 223 aa5.94□□□□□ -1.46
NEK3-203ENST00000551355 C1orf195Q5TG92 126 aa5.93□□□□□ -1.46
NEK3-203ENST00000551355 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
NEK3-203ENST00000551355 Q96NJ1 140 aa5.92□□□□□ -1.46
NEK3-203ENST00000551355 NDUFB1O75438 58 aa5.91□□□□□ -1.46
NEK3-203ENST00000551355 IGKV4-1P06312 121 aa5.91□□□□□ -1.46
NEK3-203ENST00000551355 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms