RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
PRPF40B-214ENST00000551320 LINC00518Q8N0U6 118 aa3.57□□□□□ -1.84
PRPF40B-214ENST00000551320 PRO1933Q9H354 126 aa3.57□□□□□ -1.84
PRPF40B-214ENST00000551320 ZNF815PA8K554 130 aa3.56□□□□□ -1.84
PRPF40B-214ENST00000551320 E9PLD3 99 aa3.56□□□□□ -1.84
PRPF40B-214ENST00000551320 NDUFA5Q16718 116 aa3.56□□□□□ -1.84
PRPF40B-214ENST00000551320 SPANXCQ9NY87 97 aa3.56□□□□□ -1.84
PRPF40B-214ENST00000551320 DHRS4-AS1Q9P1J3 65 aa3.56□□□□□ -1.84
PRPF40B-214ENST00000551320 HSPB8Q9UJY1 196 aa3.56□□□□□ -1.84
PRPF40B-214ENST00000551320 TEX49A0A1B0GTD5 131 aa3.55□□□□□ -1.84
PRPF40B-214ENST00000551320 AKR1D1P51857 326 aa3.55□□□□□ -1.84
PRPF40B-214ENST00000551320 SLC7A5P1Q8MH63 180 aa3.55□□□□□ -1.84
PRPF40B-214ENST00000551320 OBSCN-AS1Q96MR7 158 aa3.55□□□□□ -1.84
PRPF40B-214ENST00000551320 A6NDN8 102 aa3.54□□□□□ -1.84
PRPF40B-214ENST00000551320 SYS1-DBNDD2H3BUS1 97 aa3.54□□□□□ -1.84
PRPF40B-214ENST00000551320 PCP2Q8IVA1 136 aa3.54□□□□□ -1.84
PRPF40B-214ENST00000551320 ATOH7Q8N100 152 aa3.54□□□□□ -1.84
PRPF40B-214ENST00000551320 SPANXDQ9BXN6 97 aa3.54□□□□□ -1.84
PRPF40B-214ENST00000551320 COLCA2A8K830 154 aa3.53□□□□□ -1.84
PRPF40B-214ENST00000551320 CD164Q04900 197 aa3.53□□□□□ -1.84
PRPF40B-214ENST00000551320 SLC25A34Q6PIV7 304 aa3.53□□□□□ -1.84
PRPF40B-214ENST00000551320 MUSTN1Q8IVN3 82 aa3.52□□□□□ -1.85
PRPF40B-214ENST00000551320 SMIM11BQ8TCY0 68 aa3.52□□□□□ -1.85
PRPF40B-214ENST00000551320 IGLV5-48A0A075B6I7 105 aa3.51□□□□□ -1.85
PRPF40B-214ENST00000551320 C5orf52A6NGY3 159 aa3.51□□□□□ -1.85
PRPF40B-214ENST00000551320 C3orf79P0CE67 100 aa3.51□□□□□ -1.85
PRPF40B-214ENST00000551320 LINC01545Q5VT33 79 aa3.51□□□□□ -1.85
PRPF40B-214ENST00000551320 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
PRPF40B-214ENST00000551320 HIST1H2BKO60814 126 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 TIMM17BO60830 172 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 HIST1H2BJP06899 126 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 HIST1H2BOP23527 126 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 HIST1H2BBP33778 126 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 HIST1H2BDP58876 126 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 KRTDAPP60985 99 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 HIST1H2BCP62807 126 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 HIST2H2BEQ16778 126 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 SCGB1D4Q6XE38 83 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 HIST1H2BHQ93079 126 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 HIST1H2BNQ99877 126 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 HIST1H2BMQ99879 126 aa3.5□□□□□ -1.85
PRPF40B-214ENST00000551320 H3BUT2 72 aa3.49□□□□□ -1.85
PRPF40B-214ENST00000551320 Q5XG85 94 aa3.49□□□□□ -1.85
PRPF40B-214ENST00000551320 IGFL1Q6UW32 110 aa3.49□□□□□ -1.85
PRPF40B-214ENST00000551320 A0A1B0GWB2 263 aa3.48□□□□□ -1.85
PRPF40B-214ENST00000551320 MT2AP02795 61 aa3.48□□□□□ -1.85
PRPF40B-214ENST00000551320 CFC1P0CG37 223 aa3.48□□□□□ -1.85
PRPF40B-214ENST00000551320 Q6ZQY7 126 aa3.48□□□□□ -1.85
PRPF40B-214ENST00000551320 Q96NJ1 140 aa3.48□□□□□ -1.85
PRPF40B-214ENST00000551320 C12orf57Q99622 126 aa3.48□□□□□ -1.85
PRPF40B-214ENST00000551320 TRBV7-6A0A0J9YX20 115 aa3.47□□□□□ -1.85
PRPF40B-214ENST00000551320 TRBV7-7A0A0K0K1E9 115 aa3.47□□□□□ -1.85
PRPF40B-214ENST00000551320 KRTAP16-1A8MUX0 517 aa3.47□□□□□ -1.85
PRPF40B-214ENST00000551320 TCL1BO95988 128 aa3.47□□□□□ -1.85
PRPF40B-214ENST00000551320 MT1FP04733 61 aa3.47□□□□□ -1.85
PRPF40B-214ENST00000551320 ATP11AUNQ6ZP68 121 aa3.47□□□□□ -1.85
PRPF40B-214ENST00000551320 CBY1Q9Y3M2 126 aa3.47□□□□□ -1.85
PRPF40B-214ENST00000551320 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.85
PRPF40B-214ENST00000551320 PET117Q6UWS5 81 aa3.46□□□□□ -1.86
PRPF40B-214ENST00000551320 F8WEM9 126 aa3.45□□□□□ -1.86
PRPF40B-214ENST00000551320 DSCR10P59022 87 aa3.45□□□□□ -1.86
PRPF40B-214ENST00000551320 LINC00575Q6W349 94 aa3.45□□□□□ -1.86
PRPF40B-214ENST00000551320 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
PRPF40B-214ENST00000551320 MT3P25713 68 aa3.44□□□□□ -1.86
PRPF40B-214ENST00000551320 OCIAD2Q56VL3 154 aa3.44□□□□□ -1.86
PRPF40B-214ENST00000551320 CLEC2BQ92478 149 aa3.44□□□□□ -1.86
PRPF40B-214ENST00000551320 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
PRPF40B-214ENST00000551320 A0A1B0GV72 72 aa3.43□□□□□ -1.86
PRPF40B-214ENST00000551320 hADV29S1A0JD25 119 aa3.43□□□□□ -1.86
PRPF40B-214ENST00000551320 A4D1N5 150 aa3.43□□□□□ -1.86
PRPF40B-214ENST00000551320 TRAV13-2A0A0B4J235 113 aa3.42□□□□□ -1.86
PRPF40B-214ENST00000551320 C20orf202A1L168 122 aa3.42□□□□□ -1.86
PRPF40B-214ENST00000551320 LST1O00453 97 aa3.42□□□□□ -1.86
PRPF40B-214ENST00000551320 IFITM1P13164 125 aa3.42□□□□□ -1.86
PRPF40B-214ENST00000551320 KRTAP10-10P60014 251 aa3.42□□□□□ -1.86
PRPF40B-214ENST00000551320 NOTCH2NLQ7Z3S9 236 aa3.42□□□□□ -1.86
PRPF40B-214ENST00000551320 DEFB116Q30KQ4 102 aa3.41□□□□□ -1.86
PRPF40B-214ENST00000551320 NHP2Q9NX24 153 aaKnown RBP3.41□□□□□ -1.86
PRPF40B-214ENST00000551320 FAM236DA0A1B0GTK5 79 aa3.4□□□□□ -1.87
PRPF40B-214ENST00000551320 A8MUU9 505 aa3.4□□□□□ -1.87
PRPF40B-214ENST00000551320 FAM236CP0DP71 79 aa3.4□□□□□ -1.87
PRPF40B-214ENST00000551320 Q6JHZ5 121 aa3.4□□□□□ -1.87
PRPF40B-214ENST00000551320 C20orf166-AS1Q96NR2 134 aa3.4□□□□□ -1.87
PRPF40B-214ENST00000551320 SNHG12Q9BXW3 62 aa3.4□□□□□ -1.87
PRPF40B-214ENST00000551320 A0A087WSZ3 146 aa3.39□□□□□ -1.87
PRPF40B-214ENST00000551320 VAMP3Q15836 100 aa3.39□□□□□ -1.87
PRPF40B-214ENST00000551320 FAM218AQ96MZ4 157 aa3.39□□□□□ -1.87
PRPF40B-214ENST00000551320 SIGMAR1Q99720 223 aa3.38□□□□□ -1.87
PRPF40B-214ENST00000551320 TRBV20-1A0A075B6N2 111 aa3.37□□□□□ -1.87
PRPF40B-214ENST00000551320 HRES1P13985 223 aa3.37□□□□□ -1.87
PRPF40B-214ENST00000551320 COA6Q5JTJ3 125 aaKnown RBP3.37□□□□□ -1.87
PRPF40B-214ENST00000551320 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.37□□□□□ -1.87
PRPF40B-214ENST00000551320 Q6ZVH6 145 aa3.37□□□□□ -1.87
PRPF40B-214ENST00000551320 COPS9Q8WXC6 57 aa3.37□□□□□ -1.87
PRPF40B-214ENST00000551320 A0A1W2PNM2 257 aa3.35□□□□□ -1.87
PRPF40B-214ENST00000551320 NDUFV3P56181 108 aaKnown RBP3.35□□□□□ -1.87
PRPF40B-214ENST00000551320 HIST1H4GQ99525 98 aa3.35□□□□□ -1.87
PRPF40B-214ENST00000551320 IGKV4-1P06312 121 aa3.34□□□□□ -1.87
PRPF40B-214ENST00000551320 FABP2P12104 132 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms