RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ATOH7Q8N100 152 aa11.36□□□□□ -0.59
SMARCC2-210ENST00000550519 LINC00575Q6W349 94 aa11.34□□□□□ -0.59
SMARCC2-210ENST00000550519 Q6JHZ5 121 aa11.33□□□□□ -0.6
SMARCC2-210ENST00000550519 VAMP3Q15836 100 aa11.32□□□□□ -0.6
SMARCC2-210ENST00000550519 TRBV7-7A0A0K0K1E9 115 aa11.31□□□□□ -0.6
SMARCC2-210ENST00000550519 CLEC2BQ92478 149 aa11.31□□□□□ -0.6
SMARCC2-210ENST00000550519 IGFL1Q6UW32 110 aa11.3□□□□□ -0.6
SMARCC2-210ENST00000550519 Q6ZQY7 126 aa11.3□□□□□ -0.6
SMARCC2-210ENST00000550519 Q75L30 129 aa11.29□□□□□ -0.6
SMARCC2-210ENST00000550519 hADV29S1A0JD25 119 aa11.28□□□□□ -0.6
SMARCC2-210ENST00000550519 OBSCN-AS1Q96MR7 158 aa11.28□□□□□ -0.6
SMARCC2-210ENST00000550519 ATP11AUNQ6ZP68 121 aa11.27□□□□□ -0.61
SMARCC2-210ENST00000550519 OCIAD2Q56VL3 154 aa11.26□□□□□ -0.61
SMARCC2-210ENST00000550519 SNRPEP62304 92 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-210ENST00000550519 Q6Q795 121 aa11.24□□□□□ -0.61
SMARCC2-210ENST00000550519 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.2□□□□□ -0.62
SMARCC2-210ENST00000550519 PPDPFLQ8WWR9 84 aa11.18□□□□□ -0.62
SMARCC2-210ENST00000550519 LST1O00453 97 aa11.17□□□□□ -0.62
SMARCC2-210ENST00000550519 Q96NJ1 140 aa11.15□□□□□ -0.62
SMARCC2-210ENST00000550519 SNHG12Q9BXW3 62 aa11.15□□□□□ -0.62
SMARCC2-210ENST00000550519 H3BUT2 72 aa11.13□□□□□ -0.63
SMARCC2-210ENST00000550519 BVES-AS1Q5T3Y7 98 aa11.13□□□□□ -0.63
SMARCC2-210ENST00000550519 SCGB1D1O95968 90 aa11.12□□□□□ -0.63
SMARCC2-210ENST00000550519 C20orf166-AS1Q96NR2 134 aa11.12□□□□□ -0.63
SMARCC2-210ENST00000550519 KRTAP9-8Q9BYQ0 159 aa11.12□□□□□ -0.63
SMARCC2-210ENST00000550519 CFC1P0CG37 223 aa11.1□□□□□ -0.63
SMARCC2-210ENST00000550519 USH2AO75445 5202 aa11.09□□□□□ -0.63
SMARCC2-210ENST00000550519 HSBP1L1C9JCN9 74 aa11.09□□□□□ -0.63
SMARCC2-210ENST00000550519 A8MUU9 505 aa11.08□□□□□ -0.64
SMARCC2-210ENST00000550519 C12orf57Q99622 126 aa11.08□□□□□ -0.64
SMARCC2-210ENST00000550519 SS18L2Q9UHA2 77 aa11.08□□□□□ -0.64
SMARCC2-210ENST00000550519 HIST1H2BLQ99880 126 aa11.06□□□□□ -0.64
SMARCC2-210ENST00000550519 HIST3H2BBQ8N257 126 aa11.05□□□□□ -0.64
SMARCC2-210ENST00000550519 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.04□□□□□ -0.64
SMARCC2-210ENST00000550519 TEN1Q86WV5 123 aa11.04□□□□□ -0.64
SMARCC2-210ENST00000550519 SSPOA2VEC9 5147 aa11.04□□□□□ -0.64
SMARCC2-210ENST00000550519 HIST1H4GQ99525 98 aa11.03□□□□□ -0.64
SMARCC2-210ENST00000550519 TRBV20-1A0A075B6N2 111 aa11.01□□□□□ -0.65
SMARCC2-210ENST00000550519 KRTAP9-7A8MTY7 169 aa11□□□□□ -0.65
SMARCC2-210ENST00000550519 S100A2P29034 98 aa11□□□□□ -0.65
SMARCC2-210ENST00000550519 A0A087WSZ3 146 aa10.98□□□□□ -0.65
SMARCC2-210ENST00000550519 NDUFV3P56181 108 aaKnown RBP10.98□□□□□ -0.65
SMARCC2-210ENST00000550519 H0YGX0 51 aa10.95□□□□□ -0.66
SMARCC2-210ENST00000550519 SNCGO76070 127 aa10.95□□□□□ -0.66
SMARCC2-210ENST00000550519 FAM218AQ96MZ4 157 aa10.95□□□□□ -0.66
SMARCC2-210ENST00000550519 COX8AP10176 69 aa10.94□□□□□ -0.66
SMARCC2-210ENST00000550519 DSCR10P59022 87 aa10.94□□□□□ -0.66
SMARCC2-210ENST00000550519 KRTAP16-1A8MUX0 517 aa10.91□□□□□ -0.66
SMARCC2-210ENST00000550519 H3BMG7 143 aa10.91□□□□□ -0.66
SMARCC2-210ENST00000550519 DLEU1O43261 78 aa10.91□□□□□ -0.66
SMARCC2-210ENST00000550519 RAB37Q96AX2 223 aa10.91□□□□□ -0.66
SMARCC2-210ENST00000550519 MT2AP02795 61 aa10.9□□□□□ -0.66
SMARCC2-210ENST00000550519 A0A0B4J2C4 111 aa10.88□□□□□ -0.67
SMARCC2-210ENST00000550519 A0A1W2PNM2 257 aa10.87□□□□□ -0.67
SMARCC2-210ENST00000550519 SIGMAR1Q99720 223 aa10.86□□□□□ -0.67
SMARCC2-210ENST00000550519 FCGBPQ9Y6R7 5405 aaPredicted RBP10.86□□□□□ -0.67
SMARCC2-210ENST00000550519 A0A1B0GX51 115 aa10.85□□□□□ -0.67
SMARCC2-210ENST00000550519 LINC00313P59037 77 aa10.85□□□□□ -0.67
SMARCC2-210ENST00000550519 GHRHP01286 108 aa10.84□□□□□ -0.67
SMARCC2-210ENST00000550519 FABP2P12104 132 aa10.84□□□□□ -0.67
SMARCC2-210ENST00000550519 MPLKIPQ8TAP9 179 aa10.84□□□□□ -0.67
SMARCC2-210ENST00000550519 FAM236DA0A1B0GTK5 79 aa10.83□□□□□ -0.68
SMARCC2-210ENST00000550519 S100A6P06703 90 aa10.83□□□□□ -0.68
SMARCC2-210ENST00000550519 FAM236CP0DP71 79 aa10.83□□□□□ -0.68
SMARCC2-210ENST00000550519 MT1FP04733 61 aa10.82□□□□□ -0.68
SMARCC2-210ENST00000550519 HIGD1BQ9P298 99 aa10.82□□□□□ -0.68
SMARCC2-210ENST00000550519 LCE2BO14633 110 aa10.81□□□□□ -0.68
SMARCC2-210ENST00000550519 C14orf144Q96I85 54 aa10.81□□□□□ -0.68
SMARCC2-210ENST00000550519 HRES1P13985 223 aa10.8□□□□□ -0.68
SMARCC2-210ENST00000550519 IGKV4-1P06312 121 aa10.79□□□□□ -0.68
SMARCC2-210ENST00000550519 NOTCH2NLQ7Z3S9 236 aa10.78□□□□□ -0.68
SMARCC2-210ENST00000550519 KRTAP9-3Q9BYQ3 159 aa10.78□□□□□ -0.68
SMARCC2-210ENST00000550519 RBM12B-AS1Q9P1G2 102 aa10.78□□□□□ -0.68
SMARCC2-210ENST00000550519 TRBV7-4A0A0J9YYF1 115 aa10.77□□□□□ -0.69
SMARCC2-210ENST00000550519 C2orf91Q6ZV80 131 aa10.76□□□□□ -0.69
SMARCC2-210ENST00000550519 KRTAP19-1Q8IUB9 90 aa10.76□□□□□ -0.69
SMARCC2-210ENST00000550519 PRO1854Q9UHT4 67 aa10.75□□□□□ -0.69
SMARCC2-210ENST00000550519 ANKRD29Q8N6D5 301 aa10.74□□□□□ -0.69
SMARCC2-210ENST00000550519 KRTAP10-10P60014 251 aa10.73□□□□□ -0.69
SMARCC2-210ENST00000550519 CEND1Q8N111 149 aa10.73□□□□□ -0.69
SMARCC2-210ENST00000550519 TRIAP1O43715 76 aa10.72□□□□□ -0.69
SMARCC2-210ENST00000550519 LINC00472Q9H8W2 130 aa10.72□□□□□ -0.69
SMARCC2-210ENST00000550519 PAM16Q9Y3D7 125 aa10.72□□□□□ -0.69
SMARCC2-210ENST00000550519 DEFB116Q30KQ4 102 aa10.71□□□□□ -0.69
SMARCC2-210ENST00000550519 SPATA45Q537H7 98 aa10.71□□□□□ -0.69
SMARCC2-210ENST00000550519 TMEM238LA0A1B0GVL6 79 aa10.69□□□□□ -0.7
SMARCC2-210ENST00000550519 A6NJY4 79 aa10.69□□□□□ -0.7
SMARCC2-210ENST00000550519 IGHV6-1A0A0B4J1U7 121 aa10.67□□□□□ -0.7
SMARCC2-210ENST00000550519 FXYD2P54710 66 aa10.67□□□□□ -0.7
SMARCC2-210ENST00000550519 ORMDL1Q9P0S3 153 aa10.67□□□□□ -0.7
SMARCC2-210ENST00000550519 A0A1B0GV72 72 aa10.66□□□□□ -0.7
SMARCC2-210ENST00000550519 H3BQ85 93 aa10.66□□□□□ -0.7
SMARCC2-210ENST00000550519 DNAL4O96015 105 aa10.65□□□□□ -0.7
SMARCC2-210ENST00000550519 CCKP06307 115 aa10.64□□□□□ -0.71
SMARCC2-210ENST00000550519 TRACP01848 142 aa10.63□□□□□ -0.71
SMARCC2-210ENST00000550519 VAMP8Q9BV40 100 aa10.63□□□□□ -0.71
SMARCC2-210ENST00000550519 TMEM256-PLSCR3K7ERE1 68 aa10.62□□□□□ -0.71
SMARCC2-210ENST00000550519 S100A1P23297 94 aa10.6□□□□□ -0.71
SMARCC2-210ENST00000550519 C8orf87E5RJ46 101 aa10.59□□□□□ -0.71
SMARCC2-210ENST00000550519 MTURNQ8N3F0 131 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms