RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 C9JAW5 83 aa4.96□□□□□ -1.62
DEPDC4-207ENST00000549249 ERC2-IT1O76042 136 aa4.96□□□□□ -1.62
DEPDC4-207ENST00000549249 H0Y9J4 135 aa4.95□□□□□ -1.62
DEPDC4-207ENST00000549249 ABCA13Q86UQ4 5058 aa4.95□□□□□ -1.62
DEPDC4-207ENST00000549249 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
DEPDC4-207ENST00000549249 INAFM2P0DMQ5 153 aa4.94□□□□□ -1.62
DEPDC4-207ENST00000549249 UBE2AP49459 152 aa4.94□□□□□ -1.62
DEPDC4-207ENST00000549249 C1orf137Q5JT78 98 aa4.94□□□□□ -1.62
DEPDC4-207ENST00000549249 Q6ZQY7 126 aa4.94□□□□□ -1.62
DEPDC4-207ENST00000549249 DHRS4-AS1Q9P1J3 65 aa4.94□□□□□ -1.62
DEPDC4-207ENST00000549249 SLC25A20O43772 301 aa4.93□□□□□ -1.62
DEPDC4-207ENST00000549249 DNAL4O96015 105 aa4.93□□□□□ -1.62
DEPDC4-207ENST00000549249 IGLV7-43P04211 117 aa4.93□□□□□ -1.62
DEPDC4-207ENST00000549249 LINC01547P58512 204 aaPredicted RBP4.93□□□□□ -1.62
DEPDC4-207ENST00000549249 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.93□□□□□ -1.62
DEPDC4-207ENST00000549249 ST20-AS1Q8NBB2 130 aa4.93□□□□□ -1.62
DEPDC4-207ENST00000549249 LINC01600Q96MT4 127 aa4.93□□□□□ -1.62
DEPDC4-207ENST00000549249 VPS13BQ7Z7G8 4022 aa4.93□□□□□ -1.62
DEPDC4-207ENST00000549249 H3BT86 120 aa4.92□□□□□ -1.62
DEPDC4-207ENST00000549249 BAALC-AS2P0C853 105 aa4.92□□□□□ -1.62
DEPDC4-207ENST00000549249 HIGD2AQ9BW72 106 aa4.92□□□□□ -1.62
DEPDC4-207ENST00000549249 HSPG2P98160 4391 aa4.92□□□□□ -1.62
DEPDC4-207ENST00000549249 F8W1H4 67 aa4.91□□□□□ -1.62
DEPDC4-207ENST00000549249 ZNF861PO60384 105 aa4.91□□□□□ -1.62
DEPDC4-207ENST00000549249 SMR3BP02814 79 aaPredicted RBP4.91□□□□□ -1.62
DEPDC4-207ENST00000549249 Q8N377 158 aa4.91□□□□□ -1.62
DEPDC4-207ENST00000549249 ANKRD29Q8N6D5 301 aa4.91□□□□□ -1.62
DEPDC4-207ENST00000549249 ORMDL1Q9P0S3 153 aa4.91□□□□□ -1.62
DEPDC4-207ENST00000549249 IGLV5-48A0A075B6I7 105 aa4.9□□□□□ -1.63
DEPDC4-207ENST00000549249 KRTAP10-4P60372 401 aaPredicted RBP4.9□□□□□ -1.63
DEPDC4-207ENST00000549249 SNCGO76070 127 aa4.89□□□□□ -1.63
DEPDC4-207ENST00000549249 RPL37AP61513 92 aaKnown RBP4.89□□□□□ -1.63
DEPDC4-207ENST00000549249 DEFB105AQ8NG35 78 aa4.89□□□□□ -1.63
DEPDC4-207ENST00000549249 TMEM256-PLSCR3K7ERE1 68 aa4.88□□□□□ -1.63
DEPDC4-207ENST00000549249 ETDBQ3ZM63 59 aa4.88□□□□□ -1.63
DEPDC4-207ENST00000549249 OCIAD2Q56VL3 154 aa4.88□□□□□ -1.63
DEPDC4-207ENST00000549249 SPRR1BP22528 89 aa4.87□□□□□ -1.63
DEPDC4-207ENST00000549249 SMIM29Q86T20 159 aa4.87□□□□□ -1.63
DEPDC4-207ENST00000549249 TEN1Q86WV5 123 aa4.87□□□□□ -1.63
DEPDC4-207ENST00000549249 C3orf22Q8N5N4 141 aa4.87□□□□□ -1.63
DEPDC4-207ENST00000549249 SPRR4Q96PI1 79 aa4.87□□□□□ -1.63
DEPDC4-207ENST00000549249 DMBT1Q9UGM3 2413 aaPredicted RBP4.86□□□□□ -1.63
DEPDC4-207ENST00000549249 TEX49A0A1B0GTD5 131 aa4.86□□□□□ -1.63
DEPDC4-207ENST00000549249 A0A1B0GV72 72 aa4.86□□□□□ -1.63
DEPDC4-207ENST00000549249 H3BQ85 93 aa4.86□□□□□ -1.63
DEPDC4-207ENST00000549249 GAGE2AQ6NT46 116 aa4.86□□□□□ -1.63
DEPDC4-207ENST00000549249 PPDPFLQ8WWR9 84 aa4.86□□□□□ -1.63
DEPDC4-207ENST00000549249 OBSCN-AS1Q96MR7 158 aa4.86□□□□□ -1.63
DEPDC4-207ENST00000549249 NDUFV3P56181 108 aaKnown RBP4.85□□□□□ -1.63
DEPDC4-207ENST00000549249 LINC00483Q53H64 154 aa4.85□□□□□ -1.63
DEPDC4-207ENST00000549249 PKHD1L1Q86WI1 4243 aa4.85□□□□□ -1.63
DEPDC4-207ENST00000549249 ANAPC11Q9NYG5 84 aa4.84□□□□□ -1.63
DEPDC4-207ENST00000549249 LAMTOR3Q9UHA4 124 aa4.84□□□□□ -1.63
DEPDC4-207ENST00000549249 KRTAP1-4P0C5Y4 121 aa4.83□□□□□ -1.64
DEPDC4-207ENST00000549249 Q5VSD8 79 aa4.83□□□□□ -1.64
DEPDC4-207ENST00000549249 ZNF706Q9Y5V0 76 aaPredicted RBP4.83□□□□□ -1.64
DEPDC4-207ENST00000549249 C14orf132Q9NPU4 83 aa4.82□□□□□ -1.64
DEPDC4-207ENST00000549249 HERC1Q15751 4861 aa4.82□□□□□ -1.64
DEPDC4-207ENST00000549249 TRBV7-4A0A0J9YYF1 115 aa4.81□□□□□ -1.64
DEPDC4-207ENST00000549249 JMJD7-PLA2G4BH0Y9G9 81 aa4.81□□□□□ -1.64
DEPDC4-207ENST00000549249 SPINK6Q6UWN8 80 aa4.81□□□□□ -1.64
DEPDC4-207ENST00000549249 FAT1Q14517 4588 aa4.81□□□□□ -1.64
DEPDC4-207ENST00000549249 IGLV8-61A0A075B6I0 122 aa4.8□□□□□ -1.64
DEPDC4-207ENST00000549249 A0A0G2JQZ4 141 aa4.8□□□□□ -1.64
DEPDC4-207ENST00000549249 RBM3P98179 157 aaKnown RBP4.8□□□□□ -1.64
DEPDC4-207ENST00000549249 SRRM2Q9UQ35 2752 aaKnown RBP4.8□□□□□ -1.64
DEPDC4-207ENST00000549249 LOC110117498A0A087WWA1 95 aa4.79□□□□□ -1.64
DEPDC4-207ENST00000549249 A0A087X002 238 aa4.79□□□□□ -1.64
DEPDC4-207ENST00000549249 IGLV9-49A0A0B4J1Y8 123 aa4.79□□□□□ -1.64
DEPDC4-207ENST00000549249 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
DEPDC4-207ENST00000549249 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
DEPDC4-207ENST00000549249 Q6ZQT0 140 aa4.79□□□□□ -1.64
DEPDC4-207ENST00000549249 F8WEM9 126 aa4.78□□□□□ -1.64
DEPDC4-207ENST00000549249 MOBPQ13875 183 aa4.78□□□□□ -1.64
DEPDC4-207ENST00000549249 IGFL1Q6UW32 110 aa4.78□□□□□ -1.64
DEPDC4-207ENST00000549249 FAM229BQ4G0N7 80 aa4.77□□□□□ -1.65
DEPDC4-207ENST00000549249 C9orf153Q5TBE3 101 aa4.77□□□□□ -1.65
DEPDC4-207ENST00000549249 DSCR8Q96T75 97 aa4.77□□□□□ -1.65
DEPDC4-207ENST00000549249 FLG2Q5D862 2391 aaPredicted RBP4.76□□□□□ -1.65
DEPDC4-207ENST00000549249 A0A1W2PNM2 257 aa4.76□□□□□ -1.65
DEPDC4-207ENST00000549249 CCKP06307 115 aa4.76□□□□□ -1.65
DEPDC4-207ENST00000549249 Q8NBF4 154 aa4.76□□□□□ -1.65
DEPDC4-207ENST00000549249 CRYGAP11844 174 aa4.74□□□□□ -1.65
DEPDC4-207ENST00000549249 PDE6GP18545 87 aa4.74□□□□□ -1.65
DEPDC4-207ENST00000549249 Q6JHZ5 121 aa4.74□□□□□ -1.65
DEPDC4-207ENST00000549249 PRR26Q8N8Z3 221 aa4.73□□□□□ -1.65
DEPDC4-207ENST00000549249 VPS25Q9BRG1 176 aa4.73□□□□□ -1.65
DEPDC4-207ENST00000549249 FAM240AA0A1B0GVK7 77 aa4.72□□□□□ -1.65
DEPDC4-207ENST00000549249 K7ERU9 68 aa4.72□□□□□ -1.65
DEPDC4-207ENST00000549249 Q6Q795 121 aa4.72□□□□□ -1.65
DEPDC4-207ENST00000549249 SSBP3-AS1Q7Z2R9 100 aa4.72□□□□□ -1.65
DEPDC4-207ENST00000549249 LINC00846Q9NV44 126 aa4.72□□□□□ -1.65
DEPDC4-207ENST00000549249 MYCBP2O75592 4640 aa4.71□□□□□ -1.65
DEPDC4-207ENST00000549249 KRTAP29-1A8MX34 341 aaPredicted RBP4.71□□□□□ -1.66
DEPDC4-207ENST00000549249 J3QR89 54 aa4.71□□□□□ -1.66
DEPDC4-207ENST00000549249 TYMSOSQ8TAI1 123 aa4.71□□□□□ -1.66
DEPDC4-207ENST00000549249 HRCT1Q6UXD1 115 aa4.7□□□□□ -1.66
DEPDC4-207ENST00000549249 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
DEPDC4-207ENST00000549249 OXTP01178 125 aa4.69□□□□□ -1.66
DEPDC4-207ENST00000549249 ACYP1P07311 99 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms