RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 SRRM2Q9UQ35 2752 aaKnown RBP2.22□□□□□ -2.05
APAF1-208ENST00000549007 Q5W150 140 aa2.21□□□□□ -2.06
APAF1-208ENST00000549007 PLAC8Q9NZF1 115 aa2.21□□□□□ -2.06
APAF1-208ENST00000549007 IGKV2-28A0A075B6P5 120 aa2.21□□□□□ -2.06
APAF1-208ENST00000549007 A0A1W2PPM0 123 aa2.21□□□□□ -2.06
APAF1-208ENST00000549007 IGKV2D-28P01615 120 aa2.21□□□□□ -2.06
APAF1-208ENST00000549007 UBE2BP63146 152 aa2.21□□□□□ -2.06
APAF1-208ENST00000549007 Q5VSD8 79 aa2.21□□□□□ -2.06
APAF1-208ENST00000549007 C22orf24Q9Y442 160 aa2.21□□□□□ -2.06
APAF1-208ENST00000549007 VPS13BQ7Z7G8 4022 aa2.21□□□□□ -2.06
APAF1-208ENST00000549007 ANAPC11Q9NYG5 84 aa2.21□□□□□ -2.06
APAF1-208ENST00000549007 H3BUT2 72 aa2.2□□□□□ -2.06
APAF1-208ENST00000549007 VPS25Q9BRG1 176 aa2.2□□□□□ -2.06
APAF1-208ENST00000549007 LINC00474Q9P2X8 69 aa2.2□□□□□ -2.06
APAF1-208ENST00000549007 PCLOQ9Y6V0 5065 aa2.2□□□□□ -2.06
APAF1-208ENST00000549007 TMEM238C9JI98 176 aa2.2□□□□□ -2.06
APAF1-208ENST00000549007 LINC00308Q8TCZ7 52 aa2.2□□□□□ -2.06
APAF1-208ENST00000549007 LINC00167Q96N53 147 aa2.2□□□□□ -2.06
APAF1-208ENST00000549007 FABP2P12104 132 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 RPL37AP61513 92 aaKnown RBP2.19□□□□□ -2.06
APAF1-208ENST00000549007 COX17Q14061 63 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 SFTA2Q6UW10 78 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 Q8N9L7 120 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 PSORS1C2Q9UIG4 136 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 SPCS1Q9Y6A9 102 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 MP68P56378 58 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 C1orf137Q5JT78 98 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 MUSTN1Q8IVN3 82 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 PKIGQ9Y2B9 76 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 TRBV10-3A0A0K0K1G6 114 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 A6NED7 52 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 FXYD2P54710 66 aa2.19□□□□□ -2.06
APAF1-208ENST00000549007 MYCBP2O75592 4640 aa2.18□□□□□ -2.06
APAF1-208ENST00000549007 KRTAP10-4P60372 401 aaPredicted RBP2.18□□□□□ -2.06
APAF1-208ENST00000549007 F8W1H4 67 aa2.18□□□□□ -2.06
APAF1-208ENST00000549007 OR13C6PQ8NH95 151 aa2.18□□□□□ -2.06
APAF1-208ENST00000549007 RAB37Q96AX2 223 aa2.18□□□□□ -2.06
APAF1-208ENST00000549007 LRP1Q07954 4544 aaKnown RBP2.18□□□□□ -2.06
APAF1-208ENST00000549007 TIMM17BO60830 172 aa2.18□□□□□ -2.06
APAF1-208ENST00000549007 SCGB1A1P11684 91 aa2.18□□□□□ -2.06
APAF1-208ENST00000549007 PRLHP81277 87 aa2.18□□□□□ -2.06
APAF1-208ENST00000549007 SPANXDQ9BXN6 97 aa2.18□□□□□ -2.06
APAF1-208ENST00000549007 SPANXCQ9NY87 97 aa2.18□□□□□ -2.06
APAF1-208ENST00000549007 M0R378 163 aa2.17□□□□□ -2.06
APAF1-208ENST00000549007 NAA38Q9BRA0 125 aaKnown RBP2.17□□□□□ -2.06
APAF1-208ENST00000549007 NHP2Q9NX24 153 aaKnown RBP2.17□□□□□ -2.06
APAF1-208ENST00000549007 A8MU10 97 aa2.17□□□□□ -2.06
APAF1-208ENST00000549007 H7C2G1 150 aa2.17□□□□□ -2.06
APAF1-208ENST00000549007 S100A7L2Q5SY68 101 aa2.17□□□□□ -2.06
APAF1-208ENST00000549007 K7ERJ3 54 aa2.16□□□□□ -2.06
APAF1-208ENST00000549007 MOBPQ13875 183 aa2.16□□□□□ -2.06
APAF1-208ENST00000549007 TMEM126AQ9H061 195 aa2.16□□□□□ -2.06
APAF1-208ENST00000549007 SPANXB1Q9NS25 103 aaPredicted RBP2.16□□□□□ -2.06
APAF1-208ENST00000549007 PRO0461Q9UI25 63 aa2.16□□□□□ -2.06
APAF1-208ENST00000549007 J3QR89 54 aa2.16□□□□□ -2.06
APAF1-208ENST00000549007 INAFM2P0DMQ5 153 aa2.16□□□□□ -2.06
APAF1-208ENST00000549007 LOC107984156A0A0G2JMH3 177 aa2.16□□□□□ -2.06
APAF1-208ENST00000549007 IGLV7-43P04211 117 aa2.16□□□□□ -2.06
APAF1-208ENST00000549007 ARL17AQ8IVW1 177 aa2.16□□□□□ -2.06
APAF1-208ENST00000549007 IFITM1P13164 125 aa2.15□□□□□ -2.06
APAF1-208ENST00000549007 HIGD2AQ9BW72 106 aa2.15□□□□□ -2.06
APAF1-208ENST00000549007 PKHD1L1Q86WI1 4243 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 TRAV23DV6A0A075B6W5 121 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 A0A0B4J2C4 111 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 BCE1O60756 84 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 NDUFC2O95298 119 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 IGLV6-57P01721 117 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 SIGMAR1Q99720 223 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 FAT3Q8TDW7 4589 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 TRBV10-2A0A0K0K1G8 114 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 ETDCA0A1B0GVM5 59 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 H3BMG7 143 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 LYRM7Q5U5X0 104 aa2.15□□□□□ -2.07
APAF1-208ENST00000549007 A8MWP4 228 aa2.14□□□□□ -2.07
APAF1-208ENST00000549007 ZNF73O43830 326 aaPredicted RBP2.14□□□□□ -2.07
APAF1-208ENST00000549007 ERC2-IT1O76042 136 aa2.14□□□□□ -2.07
APAF1-208ENST00000549007 KCNQ1DNQ9H478 68 aa2.14□□□□□ -2.07
APAF1-208ENST00000549007 DMBT1Q9UGM3 2413 aaPredicted RBP2.14□□□□□ -2.07
APAF1-208ENST00000549007 KRTAP10-6P60371 365 aaPredicted RBP2.14□□□□□ -2.07
APAF1-208ENST00000549007 C1orf195Q5TG92 126 aa2.14□□□□□ -2.07
APAF1-208ENST00000549007 SMIM11BQ8TCY0 68 aa2.14□□□□□ -2.07
APAF1-208ENST00000549007 TRBV20-1A0A075B6N2 111 aa2.14□□□□□ -2.07
APAF1-208ENST00000549007 ETDBQ3ZM63 59 aa2.14□□□□□ -2.07
APAF1-208ENST00000549007 Q9BRP9 147 aa2.14□□□□□ -2.07
APAF1-208ENST00000549007 RPL28P46779 137 aaKnown RBP2.13□□□□□ -2.07
APAF1-208ENST00000549007 KRTAP13-1Q8IUC0 172 aa2.13□□□□□ -2.07
APAF1-208ENST00000549007 ST20-AS1Q8NBB2 130 aa2.13□□□□□ -2.07
APAF1-208ENST00000549007 SMCR5Q8TEV8 140 aa2.13□□□□□ -2.07
APAF1-208ENST00000549007 COPS9Q8WXC6 57 aa2.13□□□□□ -2.07
APAF1-208ENST00000549007 DIRC1Q969H9 104 aa2.13□□□□□ -2.07
APAF1-208ENST00000549007 LINC01600Q96MT4 127 aa2.13□□□□□ -2.07
APAF1-208ENST00000549007 TRAV13-2A0A0B4J235 113 aa2.13□□□□□ -2.07
APAF1-208ENST00000549007 A8MUU9 505 aa2.13□□□□□ -2.07
APAF1-208ENST00000549007 SPRR1AP35321 89 aa2.13□□□□□ -2.07
APAF1-208ENST00000549007 PPDPFLQ8WWR9 84 aa2.12□□□□□ -2.07
APAF1-208ENST00000549007 A0A1B0GV72 72 aa2.12□□□□□ -2.07
APAF1-208ENST00000549007 COX7BP24311 80 aa2.12□□□□□ -2.07
APAF1-208ENST00000549007 HERC1Q15751 4861 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms