RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 PSMB2P49721 201 aa7.18□□□□□ -1.26
PTCH1-218ENST00000548945 MOBPQ13875 183 aa7.18□□□□□ -1.26
PTCH1-218ENST00000548945 NAA38Q9BRA0 125 aaKnown RBP7.18□□□□□ -1.26
PTCH1-218ENST00000548945 KRTAP4-1Q9BYQ7 146 aa7.18□□□□□ -1.26
PTCH1-218ENST00000548945 CBY1Q9Y3M2 126 aa7.18□□□□□ -1.26
PTCH1-218ENST00000548945 A0A1B0GV90 55 aa7.17□□□□□ -1.26
PTCH1-218ENST00000548945 IGLV6-57P01721 117 aa7.17□□□□□ -1.26
PTCH1-218ENST00000548945 COX6CP09669 75 aa7.17□□□□□ -1.26
PTCH1-218ENST00000548945 IGLV9-49A0A0B4J1Y8 123 aa7.16□□□□□ -1.26
PTCH1-218ENST00000548945 TRIAP1O43715 76 aa7.15□□□□□ -1.26
PTCH1-218ENST00000548945 ERC2-IT1O76042 136 aa7.15□□□□□ -1.26
PTCH1-218ENST00000548945 SCGB1C2P0DMR2 95 aa7.15□□□□□ -1.26
PTCH1-218ENST00000548945 VAMP3Q15836 100 aa7.15□□□□□ -1.26
PTCH1-218ENST00000548945 XP32Q5T750 250 aa7.15□□□□□ -1.26
PTCH1-218ENST00000548945 Q6ZRX8 168 aa7.15□□□□□ -1.26
PTCH1-218ENST00000548945 SMIM11BQ8TCY0 68 aa7.15□□□□□ -1.26
PTCH1-218ENST00000548945 Q9BRP9 147 aa7.15□□□□□ -1.26
PTCH1-218ENST00000548945 TRAV23DV6A0A075B6W5 121 aa7.13□□□□□ -1.27
PTCH1-218ENST00000548945 SPCS1Q9Y6A9 102 aa7.13□□□□□ -1.27
PTCH1-218ENST00000548945 TRBV20-1A0A075B6N2 111 aa7.12□□□□□ -1.27
PTCH1-218ENST00000548945 GTF2H5Q6ZYL4 71 aa7.12□□□□□ -1.27
PTCH1-218ENST00000548945 H0YGX0 51 aa7.11□□□□□ -1.27
PTCH1-218ENST00000548945 K7EP34 96 aa7.11□□□□□ -1.27
PTCH1-218ENST00000548945 ZNF73O43830 326 aaPredicted RBP7.1□□□□□ -1.27
PTCH1-218ENST00000548945 C6orf99Q4VX62 202 aa7.1□□□□□ -1.27
PTCH1-218ENST00000548945 TCL1BO95988 128 aa7.09□□□□□ -1.27
PTCH1-218ENST00000548945 ATXN8Q156A1 80 aa7.09□□□□□ -1.27
PTCH1-218ENST00000548945 TRBV7-6A0A0J9YX20 115 aa7.08□□□□□ -1.28
PTCH1-218ENST00000548945 C9orf153Q5TBE3 101 aa7.08□□□□□ -1.28
PTCH1-218ENST00000548945 LST1O00453 97 aa7.07□□□□□ -1.28
PTCH1-218ENST00000548945 UBE2V1Q13404 147 aa7.07□□□□□ -1.28
PTCH1-218ENST00000548945 LCE2CQ5TA81 110 aa7.07□□□□□ -1.28
PTCH1-218ENST00000548945 CLEC2BQ92478 149 aa7.07□□□□□ -1.28
PTCH1-218ENST00000548945 COX7BP24311 80 aa7.06□□□□□ -1.28
PTCH1-218ENST00000548945 CRCT1Q9UGL9 99 aa7.06□□□□□ -1.28
PTCH1-218ENST00000548945 A0A1B0GX51 115 aa7.05□□□□□ -1.28
PTCH1-218ENST00000548945 H3BMG7 143 aa7.05□□□□□ -1.28
PTCH1-218ENST00000548945 SNCGO76070 127 aa7.05□□□□□ -1.28
PTCH1-218ENST00000548945 TRACP01848 142 aa7.05□□□□□ -1.28
PTCH1-218ENST00000548945 ELOF1P60002 83 aaKnown RBP7.05□□□□□ -1.28
PTCH1-218ENST00000548945 LIMD2Q9BT23 127 aa7.05□□□□□ -1.28
PTCH1-218ENST00000548945 FAM218AQ96MZ4 157 aa7.04□□□□□ -1.28
PTCH1-218ENST00000548945 DNAL4O96015 105 aa7.03□□□□□ -1.28
PTCH1-218ENST00000548945 SPRR1BP22528 89 aa7.03□□□□□ -1.28
PTCH1-218ENST00000548945 KRTAP19-2Q3LHN2 52 aa7.03□□□□□ -1.28
PTCH1-218ENST00000548945 ST20-AS1Q8NBB2 130 aa7.03□□□□□ -1.28
PTCH1-218ENST00000548945 LINC00575Q6W349 94 aa7.02□□□□□ -1.29
PTCH1-218ENST00000548945 FSIP2Q5CZC0 6907 aa7.01□□□□□ -1.29
PTCH1-218ENST00000548945 hADV29S1A0JD25 119 aa7□□□□□ -1.29
PTCH1-218ENST00000548945 C9JAW5 83 aa7□□□□□ -1.29
PTCH1-218ENST00000548945 DHRS4-AS1Q9P1J3 65 aa7□□□□□ -1.29
PTCH1-218ENST00000548945 F8W1H4 67 aa6.99□□□□□ -1.29
PTCH1-218ENST00000548945 MT1HP80294 61 aa6.99□□□□□ -1.29
PTCH1-218ENST00000548945 PCOTHQ58A44 107 aa6.99□□□□□ -1.29
PTCH1-218ENST00000548945 IGLV8-61A0A075B6I0 122 aa6.98□□□□□ -1.29
PTCH1-218ENST00000548945 H3BT86 120 aa6.98□□□□□ -1.29
PTCH1-218ENST00000548945 CD164Q04900 197 aa6.98□□□□□ -1.29
PTCH1-218ENST00000548945 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
PTCH1-218ENST00000548945 PRO0461Q9UI25 63 aa6.98□□□□□ -1.29
PTCH1-218ENST00000548945 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.97□□□□□ -1.29
PTCH1-218ENST00000548945 MTURNQ8N3F0 131 aa6.97□□□□□ -1.29
PTCH1-218ENST00000548945 GHRHP01286 108 aa6.96□□□□□ -1.3
PTCH1-218ENST00000548945 ORMDL1Q9P0S3 153 aa6.96□□□□□ -1.3
PTCH1-218ENST00000548945 C9orf92A6NGG3 77 aa6.95□□□□□ -1.3
PTCH1-218ENST00000548945 H3BQ85 93 aa6.95□□□□□ -1.3
PTCH1-218ENST00000548945 OCIAD2Q56VL3 154 aa6.95□□□□□ -1.3
PTCH1-218ENST00000548945 Q5XG85 94 aa6.95□□□□□ -1.3
PTCH1-218ENST00000548945 HRCT1Q6UXD1 115 aa6.95□□□□□ -1.3
PTCH1-218ENST00000548945 Q6ZQY7 126 aa6.95□□□□□ -1.3
PTCH1-218ENST00000548945 ANKRD29Q8N6D5 301 aa6.95□□□□□ -1.3
PTCH1-218ENST00000548945 BAALC-AS2P0C853 105 aa6.94□□□□□ -1.3
PTCH1-218ENST00000548945 SMCPP49901 116 aaPredicted RBP6.94□□□□□ -1.3
PTCH1-218ENST00000548945 TMEM256-PLSCR3K7ERE1 68 aa6.92□□□□□ -1.3
PTCH1-218ENST00000548945 LORP23490 312 aaPredicted RBP6.92□□□□□ -1.3
PTCH1-218ENST00000548945 TEX49A0A1B0GTD5 131 aa6.91□□□□□ -1.3
PTCH1-218ENST00000548945 PPDPFLQ8WWR9 84 aa6.91□□□□□ -1.3
PTCH1-218ENST00000548945 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.3
PTCH1-218ENST00000548945 TEN1Q86WV5 123 aa6.9□□□□□ -1.3
PTCH1-218ENST00000548945 ETDBQ3ZM63 59 aa6.89□□□□□ -1.31
PTCH1-218ENST00000548945 FLGP20930 4061 aaPredicted RBP6.89□□□□□ -1.31
PTCH1-218ENST00000548945 IGLV5-48A0A075B6I7 105 aa6.88□□□□□ -1.31
PTCH1-218ENST00000548945 C1orf195Q5TG92 126 aa6.88□□□□□ -1.31
PTCH1-218ENST00000548945 RPL37P61927 97 aaKnown RBP6.87□□□□□ -1.31
PTCH1-218ENST00000548945 SMIM29Q86T20 159 aa6.87□□□□□ -1.31
PTCH1-218ENST00000548945 DEFB105AQ8NG35 78 aa6.87□□□□□ -1.31
PTCH1-218ENST00000548945 JMJD7-PLA2G4BH0Y9G9 81 aa6.85□□□□□ -1.31
PTCH1-218ENST00000548945 M0R2T5 61 aa6.84□□□□□ -1.31
PTCH1-218ENST00000548945 NDUFV3P56181 108 aaKnown RBP6.83□□□□□ -1.32
PTCH1-218ENST00000548945 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
PTCH1-218ENST00000548945 OBSCN-AS1Q96MR7 158 aa6.83□□□□□ -1.32
PTCH1-218ENST00000548945 RBM3P98179 157 aaKnown RBP6.81□□□□□ -1.32
PTCH1-218ENST00000548945 F8WEM9 126 aa6.8□□□□□ -1.32
PTCH1-218ENST00000548945 J3QR89 54 aa6.8□□□□□ -1.32
PTCH1-218ENST00000548945 A0A1B0GV72 72 aa6.79□□□□□ -1.32
PTCH1-218ENST00000548945 DSCR8Q96T75 97 aa6.79□□□□□ -1.32
PTCH1-218ENST00000548945 C14orf132Q9NPU4 83 aa6.79□□□□□ -1.32
PTCH1-218ENST00000548945 A0A0G2JQZ4 141 aa6.78□□□□□ -1.32
PTCH1-218ENST00000548945 K7ERU9 68 aa6.78□□□□□ -1.32
PTCH1-218ENST00000548945 C21orf62-AS1Q17RA5 79 aa6.78□□□□□ -1.32
PTCH1-218ENST00000548945 LOC110117498A0A087WWA1 95 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms