RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 CHTF8P0CG12 524 aa12.37□□□□□ -0.43
CTDSP2-204ENST00000548823 KRTAP9-2Q9BYQ4 174 aa12.37□□□□□ -0.43
CTDSP2-204ENST00000548823 C14orf132Q9NPU4 83 aa12.37□□□□□ -0.43
CTDSP2-204ENST00000548823 SPACA4Q8TDM5 124 aa12.35□□□□□ -0.43
CTDSP2-204ENST00000548823 C21orf62-AS1Q17RA5 79 aa12.34□□□□□ -0.43
CTDSP2-204ENST00000548823 Q9BRP9 147 aa12.34□□□□□ -0.43
CTDSP2-204ENST00000548823 LAMTOR3Q9UHA4 124 aa12.34□□□□□ -0.43
CTDSP2-204ENST00000548823 CCKP06307 115 aa12.33□□□□□ -0.44
CTDSP2-204ENST00000548823 PDE6GP18545 87 aa12.33□□□□□ -0.44
CTDSP2-204ENST00000548823 RBM3P98179 157 aaKnown RBP12.33□□□□□ -0.44
CTDSP2-204ENST00000548823 LOC110117498A0A087WWA1 95 aa12.32□□□□□ -0.44
CTDSP2-204ENST00000548823 GAGE2AQ6NT46 116 aa12.31□□□□□ -0.44
CTDSP2-204ENST00000548823 H0Y9J4 135 aa12.3□□□□□ -0.44
CTDSP2-204ENST00000548823 NDUFV3P56181 108 aaKnown RBP12.3□□□□□ -0.44
CTDSP2-204ENST00000548823 PHF5AQ7RTV0 110 aaKnown RBP12.3□□□□□ -0.44
CTDSP2-204ENST00000548823 IGLV5-48A0A075B6I7 105 aa12.3□□□□□ -0.44
CTDSP2-204ENST00000548823 PANO1I0J062 215 aa12.29□□□□□ -0.44
CTDSP2-204ENST00000548823 LINC01547P58512 204 aaPredicted RBP12.29□□□□□ -0.44
CTDSP2-204ENST00000548823 UBE2BP63146 152 aa12.28□□□□□ -0.44
CTDSP2-204ENST00000548823 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.28□□□□□ -0.44
CTDSP2-204ENST00000548823 SCGB1A1P11684 91 aa12.27□□□□□ -0.45
CTDSP2-204ENST00000548823 Q6ZQT0 140 aa12.27□□□□□ -0.45
CTDSP2-204ENST00000548823 Q8N377 158 aa12.27□□□□□ -0.45
CTDSP2-204ENST00000548823 DSCR8Q96T75 97 aa12.27□□□□□ -0.45
CTDSP2-204ENST00000548823 FAM19A1Q7Z5A9 133 aa12.26□□□□□ -0.45
CTDSP2-204ENST00000548823 SMCR5Q8TEV8 140 aa12.26□□□□□ -0.45
CTDSP2-204ENST00000548823 TRBV7-4A0A0J9YYF1 115 aa12.25□□□□□ -0.45
CTDSP2-204ENST00000548823 MT-ATP8P03928 68 aa12.25□□□□□ -0.45
CTDSP2-204ENST00000548823 LINC00643Q86TS7 51 aa12.24□□□□□ -0.45
CTDSP2-204ENST00000548823 DPH3Q96FX2 82 aa12.24□□□□□ -0.45
CTDSP2-204ENST00000548823 PLAC8Q9NZF1 115 aa12.24□□□□□ -0.45
CTDSP2-204ENST00000548823 KRTAP11-1Q8IUC1 163 aa12.23□□□□□ -0.45
CTDSP2-204ENST00000548823 KRTAP9-6A0A140TA67 174 aa12.22□□□□□ -0.45
CTDSP2-204ENST00000548823 A0A1B0GV72 72 aa12.21□□□□□ -0.45
CTDSP2-204ENST00000548823 ERC2-IT1O76042 136 aa12.21□□□□□ -0.45
CTDSP2-204ENST00000548823 Q6Q795 121 aa12.2□□□□□ -0.46
CTDSP2-204ENST00000548823 BCE1O60756 84 aa12.19□□□□□ -0.46
CTDSP2-204ENST00000548823 LINC00846Q9NV44 126 aa12.19□□□□□ -0.46
CTDSP2-204ENST00000548823 DEFB105AQ8NG35 78 aa12.18□□□□□ -0.46
CTDSP2-204ENST00000548823 PRLHP81277 87 aa12.18□□□□□ -0.46
CTDSP2-204ENST00000548823 ST20-AS1Q8NBB2 130 aa12.18□□□□□ -0.46
CTDSP2-204ENST00000548823 TRBV7-7A0A0K0K1E9 115 aa12.16□□□□□ -0.46
CTDSP2-204ENST00000548823 KRTAP13-1Q8IUC0 172 aa12.16□□□□□ -0.46
CTDSP2-204ENST00000548823 IMUPQ9GZP8 106 aa12.16□□□□□ -0.46
CTDSP2-204ENST00000548823 UBE2AP49459 152 aa12.14□□□□□ -0.47
CTDSP2-204ENST00000548823 SPRR1BP22528 89 aa12.13□□□□□ -0.47
CTDSP2-204ENST00000548823 Q6JHZ5 121 aa12.13□□□□□ -0.47
CTDSP2-204ENST00000548823 HIGD2AQ9BW72 106 aa12.13□□□□□ -0.47
CTDSP2-204ENST00000548823 A0A1B0GW54 56 aa12.12□□□□□ -0.47
CTDSP2-204ENST00000548823 SMIM29Q86T20 159 aa12.11□□□□□ -0.47
CTDSP2-204ENST00000548823 PCP4P48539 62 aa12.09□□□□□ -0.47
CTDSP2-204ENST00000548823 KRTAP10-8P60410 259 aa12.09□□□□□ -0.47
CTDSP2-204ENST00000548823 UBL5Q9BZL1 73 aa12.09□□□□□ -0.47
CTDSP2-204ENST00000548823 ATP5EP2Q5VTU8 51 aa12.08□□□□□ -0.48
CTDSP2-204ENST00000548823 LPAP08519 4548 aa12.08□□□□□ -0.48
CTDSP2-204ENST00000548823 IGLV8-61A0A075B6I0 122 aa12.07□□□□□ -0.48
CTDSP2-204ENST00000548823 F8WEM9 126 aa12.05□□□□□ -0.48
CTDSP2-204ENST00000548823 C3orf22Q8N5N4 141 aa12.05□□□□□ -0.48
CTDSP2-204ENST00000548823 C1orf137Q5JT78 98 aa12.05□□□□□ -0.48
CTDSP2-204ENST00000548823 PSORS1C2Q9UIG4 136 aa12.05□□□□□ -0.48
CTDSP2-204ENST00000548823 MUC2Q02817 5179 aa12.03□□□□□ -0.48
CTDSP2-204ENST00000548823 Q6ZVQ6 151 aa12.01□□□□□ -0.49
CTDSP2-204ENST00000548823 A0A0U1RQV1 116 aa12□□□□□ -0.49
CTDSP2-204ENST00000548823 Q8NBF4 154 aa12□□□□□ -0.49
CTDSP2-204ENST00000548823 FAT4Q6V0I7 4981 aa12□□□□□ -0.49
CTDSP2-204ENST00000548823 SPRR4Q96PI1 79 aa11.99□□□□□ -0.49
CTDSP2-204ENST00000548823 ZNF706Q9Y5V0 76 aaPredicted RBP11.99□□□□□ -0.49
CTDSP2-204ENST00000548823 A0A1W2PNM2 257 aa11.98□□□□□ -0.49
CTDSP2-204ENST00000548823 ZNF861PO60384 105 aa11.98□□□□□ -0.49
CTDSP2-204ENST00000548823 LINC00483Q53H64 154 aa11.96□□□□□ -0.49
CTDSP2-204ENST00000548823 IGKV3D-7A0A0C4DH55 119 aa11.95□□□□□ -0.5
CTDSP2-204ENST00000548823 CXCL6P80162 114 aa11.94□□□□□ -0.5
CTDSP2-204ENST00000548823 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
CTDSP2-204ENST00000548823 CRYGAP11844 174 aa11.93□□□□□ -0.5
CTDSP2-204ENST00000548823 IGFL1Q6UW32 110 aa11.93□□□□□ -0.5
CTDSP2-204ENST00000548823 IGLV7-43P04211 117 aa11.92□□□□□ -0.5
CTDSP2-204ENST00000548823 NREPQ16612 68 aa11.9□□□□□ -0.5
CTDSP2-204ENST00000548823 LCE2AQ5TA79 106 aaPredicted RBP11.89□□□□□ -0.51
CTDSP2-204ENST00000548823 HIST1H4AP62805 103 aaKnown RBP11.87□□□□□ -0.51
CTDSP2-204ENST00000548823 FAM236AA0A1B0GUQ0 79 aa11.85□□□□□ -0.51
CTDSP2-204ENST00000548823 FAM236BA0A1B0GV22 79 aa11.85□□□□□ -0.51
CTDSP2-204ENST00000548823 ANAPC13Q9BS18 74 aa11.82□□□□□ -0.52
CTDSP2-204ENST00000548823 BPY2O14599 106 aa11.79□□□□□ -0.52
CTDSP2-204ENST00000548823 A0A087WVE0 104 aa11.78□□□□□ -0.52
CTDSP2-204ENST00000548823 A0A0G2JQZ4 141 aa11.77□□□□□ -0.53
CTDSP2-204ENST00000548823 ATOX1O00244 68 aa11.77□□□□□ -0.53
CTDSP2-204ENST00000548823 A0A087WSZ3 146 aa11.74□□□□□ -0.53
CTDSP2-204ENST00000548823 IGLV9-49A0A0B4J1Y8 123 aa11.74□□□□□ -0.53
CTDSP2-204ENST00000548823 C9orf153Q5TBE3 101 aa11.74□□□□□ -0.53
CTDSP2-204ENST00000548823 IGKV4-1P06312 121 aa11.7□□□□□ -0.54
CTDSP2-204ENST00000548823 MOBPQ13875 183 aa11.68□□□□□ -0.54
CTDSP2-204ENST00000548823 FAM229BQ4G0N7 80 aa11.67□□□□□ -0.54
CTDSP2-204ENST00000548823 SSBP3-AS1Q7Z2R9 100 aa11.67□□□□□ -0.54
CTDSP2-204ENST00000548823 DSCR10P59022 87 aa11.66□□□□□ -0.54
CTDSP2-204ENST00000548823 ANAPC11Q9NYG5 84 aa11.66□□□□□ -0.54
CTDSP2-204ENST00000548823 PRR4Q16378 134 aa11.65□□□□□ -0.55
CTDSP2-204ENST00000548823 CD164Q04900 197 aa11.64□□□□□ -0.55
CTDSP2-204ENST00000548823 LINC00472Q9H8W2 130 aa11.64□□□□□ -0.55
CTDSP2-204ENST00000548823 SS18L2Q9UHA2 77 aa11.64□□□□□ -0.55
CTDSP2-204ENST00000548823 SMIM20Q8N5G0 67 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms