RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ZNF625Q96I27 306 aaPredicted RBP4.86□□□□□ -1.63
TROAP-208ENST00000548817 LITAFQ99732 161 aa4.86□□□□□ -1.63
TROAP-208ENST00000548817 A0A1B0GV72 72 aa4.85□□□□□ -1.63
TROAP-208ENST00000548817 M0R378 163 aa4.85□□□□□ -1.63
TROAP-208ENST00000548817 LINC00158P58513 81 aa4.85□□□□□ -1.63
TROAP-208ENST00000548817 C21orf62-AS1Q17RA5 79 aa4.85□□□□□ -1.63
TROAP-208ENST00000548817 LINC00308Q8TCZ7 52 aa4.85□□□□□ -1.63
TROAP-208ENST00000548817 TRIAP1O43715 76 aa4.84□□□□□ -1.63
TROAP-208ENST00000548817 SNCGO76070 127 aa4.84□□□□□ -1.63
TROAP-208ENST00000548817 LST1O00453 97 aa4.83□□□□□ -1.64
TROAP-208ENST00000548817 ACYP1P07311 99 aa4.83□□□□□ -1.64
TROAP-208ENST00000548817 SMCPP49901 116 aaPredicted RBP4.83□□□□□ -1.64
TROAP-208ENST00000548817 ADAMTSL4-AS1Q5T5F5 129 aa4.83□□□□□ -1.64
TROAP-208ENST00000548817 SPRR4Q96PI1 79 aa4.83□□□□□ -1.64
TROAP-208ENST00000548817 H0YGX0 51 aa4.82□□□□□ -1.64
TROAP-208ENST00000548817 TRACP01848 142 aa4.82□□□□□ -1.64
TROAP-208ENST00000548817 SEC61BP60468 96 aaKnown RBP4.82□□□□□ -1.64
TROAP-208ENST00000548817 LCE2CQ5TA81 110 aa4.82□□□□□ -1.64
TROAP-208ENST00000548817 Q8NBF4 154 aa4.82□□□□□ -1.64
TROAP-208ENST00000548817 A0A0U1RRA0 63 aa4.81□□□□□ -1.64
TROAP-208ENST00000548817 FAM240AA0A1B0GVK7 77 aa4.81□□□□□ -1.64
TROAP-208ENST00000548817 ETDCA0A1B0GVM5 59 aa4.81□□□□□ -1.64
TROAP-208ENST00000548817 SPINK1P00995 79 aa4.81□□□□□ -1.64
TROAP-208ENST00000548817 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
TROAP-208ENST00000548817 KRTAP4-1Q9BYQ7 146 aa4.81□□□□□ -1.64
TROAP-208ENST00000548817 PRYO14603 147 aa4.8□□□□□ -1.64
TROAP-208ENST00000548817 DNAL4O96015 105 aa4.8□□□□□ -1.64
TROAP-208ENST00000548817 MT1HP80294 61 aa4.8□□□□□ -1.64
TROAP-208ENST00000548817 DAND5Q8N907 189 aa4.8□□□□□ -1.64
TROAP-208ENST00000548817 SMCR5Q8TEV8 140 aa4.8□□□□□ -1.64
TROAP-208ENST00000548817 NPC2P61916 151 aa4.79□□□□□ -1.64
TROAP-208ENST00000548817 SSPOA2VEC9 5147 aa4.78□□□□□ -1.64
TROAP-208ENST00000548817 A0A1B0GX51 115 aa4.78□□□□□ -1.64
TROAP-208ENST00000548817 H3BQ85 93 aa4.78□□□□□ -1.64
TROAP-208ENST00000548817 NCR3O14931 201 aa4.78□□□□□ -1.64
TROAP-208ENST00000548817 EIF4EBP3O60516 100 aaPredicted RBP4.78□□□□□ -1.64
TROAP-208ENST00000548817 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
TROAP-208ENST00000548817 KRTAP13-3Q3SY46 172 aa4.78□□□□□ -1.64
TROAP-208ENST00000548817 Q6Q795 121 aa4.78□□□□□ -1.64
TROAP-208ENST00000548817 Q8NDZ9 215 aa4.78□□□□□ -1.64
TROAP-208ENST00000548817 IGLV9-49A0A0B4J1Y8 123 aa4.77□□□□□ -1.65
TROAP-208ENST00000548817 GAGE2AQ6NT46 116 aa4.77□□□□□ -1.65
TROAP-208ENST00000548817 MIR7-3HGQ8N6C7 128 aa4.77□□□□□ -1.65
TROAP-208ENST00000548817 KCNQ1DNQ9H478 68 aa4.77□□□□□ -1.65
TROAP-208ENST00000548817 GHRHP01286 108 aa4.76□□□□□ -1.65
TROAP-208ENST00000548817 BAALC-AS2P0C853 105 aa4.76□□□□□ -1.65
TROAP-208ENST00000548817 SSBP3-AS1Q7Z2R9 100 aa4.76□□□□□ -1.65
TROAP-208ENST00000548817 CLEC2BQ92478 149 aa4.76□□□□□ -1.65
TROAP-208ENST00000548817 IMUPQ9GZP8 106 aa4.76□□□□□ -1.65
TROAP-208ENST00000548817 USH2AO75445 5202 aa4.76□□□□□ -1.65
TROAP-208ENST00000548817 NDUFC2O95298 119 aa4.75□□□□□ -1.65
TROAP-208ENST00000548817 MOBPQ13875 183 aa4.75□□□□□ -1.65
TROAP-208ENST00000548817 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
TROAP-208ENST00000548817 TRBV10-3A0A0K0K1G6 114 aa4.74□□□□□ -1.65
TROAP-208ENST00000548817 TEX49A0A1B0GTD5 131 aa4.74□□□□□ -1.65
TROAP-208ENST00000548817 SPRR1AP35321 89 aa4.74□□□□□ -1.65
TROAP-208ENST00000548817 RPS29P62273 56 aaKnown RBP4.74□□□□□ -1.65
TROAP-208ENST00000548817 LINC00483Q53H64 154 aa4.74□□□□□ -1.65
TROAP-208ENST00000548817 SOSTDC1Q6X4U4 206 aa4.74□□□□□ -1.65
TROAP-208ENST00000548817 OR13C6PQ8NH95 151 aa4.74□□□□□ -1.65
TROAP-208ENST00000548817 FCGBPQ9Y6R7 5405 aaPredicted RBP4.73□□□□□ -1.65
TROAP-208ENST00000548817 MT-ATP8P03928 68 aa4.73□□□□□ -1.65
TROAP-208ENST00000548817 C9orf153Q5TBE3 101 aa4.73□□□□□ -1.65
TROAP-208ENST00000548817 LINC00643Q86TS7 51 aa4.73□□□□□ -1.65
TROAP-208ENST00000548817 ANAPC13Q9BS18 74 aa4.73□□□□□ -1.65
TROAP-208ENST00000548817 B5MCH6 92 aa4.72□□□□□ -1.65
TROAP-208ENST00000548817 KRTAP4-16G5E9R7 235 aaPredicted RBP4.72□□□□□ -1.65
TROAP-208ENST00000548817 S100A7L2Q5SY68 101 aa4.72□□□□□ -1.65
TROAP-208ENST00000548817 Q8N377 158 aa4.72□□□□□ -1.65
TROAP-208ENST00000548817 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
TROAP-208ENST00000548817 JMJD7-PLA2G4BH0Y9G9 81 aa4.71□□□□□ -1.66
TROAP-208ENST00000548817 SMIM11BQ8TCY0 68 aa4.71□□□□□ -1.66
TROAP-208ENST00000548817 ORMDL1Q9P0S3 153 aa4.71□□□□□ -1.66
TROAP-208ENST00000548817 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
TROAP-208ENST00000548817 TMEM256-PLSCR3K7ERE1 68 aa4.7□□□□□ -1.66
TROAP-208ENST00000548817 ERC2-IT1O76042 136 aa4.7□□□□□ -1.66
TROAP-208ENST00000548817 Q6ZRX8 168 aa4.7□□□□□ -1.66
TROAP-208ENST00000548817 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
TROAP-208ENST00000548817 XP32Q5T750 250 aa4.69□□□□□ -1.66
TROAP-208ENST00000548817 NDUFV3P56181 108 aaKnown RBP4.68□□□□□ -1.66
TROAP-208ENST00000548817 Q9BRP9 147 aa4.68□□□□□ -1.66
TROAP-208ENST00000548817 LIMD2Q9BT23 127 aa4.68□□□□□ -1.66
TROAP-208ENST00000548817 TRAV23DV6A0A075B6W5 121 aa4.67□□□□□ -1.66
TROAP-208ENST00000548817 M0R2T5 61 aa4.67□□□□□ -1.66
TROAP-208ENST00000548817 PDE6GP18545 87 aa4.67□□□□□ -1.66
TROAP-208ENST00000548817 ZNF73O43830 326 aaPredicted RBP4.66□□□□□ -1.66
TROAP-208ENST00000548817 IGLV6-57P01721 117 aa4.65□□□□□ -1.67
TROAP-208ENST00000548817 ATP5EP2Q5VTU8 51 aa4.65□□□□□ -1.67
TROAP-208ENST00000548817 OBSCN-AS1Q96MR7 158 aa4.65□□□□□ -1.67
TROAP-208ENST00000548817 FAM218AQ96MZ4 157 aa4.65□□□□□ -1.67
TROAP-208ENST00000548817 LAMTOR3Q9UHA4 124 aa4.65□□□□□ -1.67
TROAP-208ENST00000548817 IGLV8-61A0A075B6I0 122 aa4.64□□□□□ -1.67
TROAP-208ENST00000548817 TRBV7-6A0A0J9YX20 115 aa4.64□□□□□ -1.67
TROAP-208ENST00000548817 hADV29S1A0JD25 119 aa4.64□□□□□ -1.67
TROAP-208ENST00000548817 PCOTHQ58A44 107 aa4.64□□□□□ -1.67
TROAP-208ENST00000548817 HRCT1Q6UXD1 115 aa4.64□□□□□ -1.67
TROAP-208ENST00000548817 ST20-AS1Q8NBB2 130 aa4.64□□□□□ -1.67
TROAP-208ENST00000548817 C9orf92A6NGG3 77 aa4.63□□□□□ -1.67
TROAP-208ENST00000548817 CCKP06307 115 aa4.63□□□□□ -1.67
TROAP-208ENST00000548817 Q6JHZ5 121 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms