RNA–Protein interactions for RNA: ENST00000548709.1

ERBB3-206, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-206ENST00000548709 Q6ZVH6 145 aa3.67□□□□□ -1.82
ERBB3-206ENST00000548709 PMCHL2Q9BQD1 86 aa3.67□□□□□ -1.82
ERBB3-206ENST00000548709 SS18L2Q9UHA2 77 aa3.67□□□□□ -1.82
ERBB3-206ENST00000548709 SERF1AO75920 110 aa3.66□□□□□ -1.82
ERBB3-206ENST00000548709 APOC3P02656 99 aa3.66□□□□□ -1.82
ERBB3-206ENST00000548709 MT1FP04733 61 aa3.66□□□□□ -1.82
ERBB3-206ENST00000548709 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
ERBB3-206ENST00000548709 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
ERBB3-206ENST00000548709 OCIAD2Q56VL3 154 aa3.66□□□□□ -1.82
ERBB3-206ENST00000548709 SLC7A5P1Q8MH63 180 aa3.66□□□□□ -1.82
ERBB3-206ENST00000548709 MTURNQ8N3F0 131 aa3.65□□□□□ -1.83
ERBB3-206ENST00000548709 PPDPFLQ8WWR9 84 aa3.65□□□□□ -1.83
ERBB3-206ENST00000548709 SCGB1D4Q6XE38 83 aa3.64□□□□□ -1.83
ERBB3-206ENST00000548709 hADV29S1A0JD25 119 aa3.63□□□□□ -1.83
ERBB3-206ENST00000548709 LINC00575Q6W349 94 aa3.63□□□□□ -1.83
ERBB3-206ENST00000548709 YPEL4Q96NS1 127 aa3.63□□□□□ -1.83
ERBB3-206ENST00000548709 SNHG12Q9BXW3 62 aa3.63□□□□□ -1.83
ERBB3-206ENST00000548709 TRGC2P03986 189 aa3.62□□□□□ -1.83
ERBB3-206ENST00000548709 SMIM11BQ8TCY0 68 aa3.62□□□□□ -1.83
ERBB3-206ENST00000548709 SYS1-DBNDD2H3BUS1 97 aa3.61□□□□□ -1.83
ERBB3-206ENST00000548709 LINC00310P59036 64 aa3.61□□□□□ -1.83
ERBB3-206ENST00000548709 PET117Q6UWS5 81 aa3.61□□□□□ -1.83
ERBB3-206ENST00000548709 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.61□□□□□ -1.83
ERBB3-206ENST00000548709 Q6ZQY7 126 aa3.61□□□□□ -1.83
ERBB3-206ENST00000548709 MPLKIPQ8TAP9 179 aa3.61□□□□□ -1.83
ERBB3-206ENST00000548709 MACF1Q9UPN3 7388 aaKnown RBP3.6□□□□□ -1.83
ERBB3-206ENST00000548709 SNCGO76070 127 aa3.6□□□□□ -1.83
ERBB3-206ENST00000548709 LINC01545Q5VT33 79 aa3.6□□□□□ -1.83
ERBB3-206ENST00000548709 TEN1Q86WV5 123 aa3.6□□□□□ -1.83
ERBB3-206ENST00000548709 LINC00313P59037 77 aa3.59□□□□□ -1.83
ERBB3-206ENST00000548709 ANKRD39Q53RE8 183 aa3.59□□□□□ -1.83
ERBB3-206ENST00000548709 MUSTN1Q8IVN3 82 aa3.59□□□□□ -1.83
ERBB3-206ENST00000548709 A8MWP4 228 aa3.58□□□□□ -1.84
ERBB3-206ENST00000548709 C12orf57Q99622 126 aa3.58□□□□□ -1.84
ERBB3-206ENST00000548709 GHRHP01286 108 aa3.57□□□□□ -1.84
ERBB3-206ENST00000548709 HRES1P13985 223 aa3.57□□□□□ -1.84
ERBB3-206ENST00000548709 BVES-AS1Q5T3Y7 98 aa3.57□□□□□ -1.84
ERBB3-206ENST00000548709 TTTY13Q9BZ97 58 aa3.57□□□□□ -1.84
ERBB3-206ENST00000548709 SYNE2Q8WXH0 6885 aaKnown RBP3.57□□□□□ -1.84
ERBB3-206ENST00000548709 NOTCH2NLQ7Z3S9 236 aa3.56□□□□□ -1.84
ERBB3-206ENST00000548709 DSCR10P59022 87 aa3.55□□□□□ -1.84
ERBB3-206ENST00000548709 A0A087WSZ3 146 aa3.54□□□□□ -1.84
ERBB3-206ENST00000548709 COLCA2A8K830 154 aa3.54□□□□□ -1.84
ERBB3-206ENST00000548709 KRTAP16-1A8MUX0 517 aa3.54□□□□□ -1.84
ERBB3-206ENST00000548709 H3BUT2 72 aa3.54□□□□□ -1.84
ERBB3-206ENST00000548709 SNRPEP62304 92 aaKnown RBP3.53□□□□□ -1.84
ERBB3-206ENST00000548709 SIGMAR1Q99720 223 aa3.53□□□□□ -1.84
ERBB3-206ENST00000548709 NDUFV3P56181 108 aaKnown RBP3.52□□□□□ -1.85
ERBB3-206ENST00000548709 IGKV4-1P06312 121 aa3.51□□□□□ -1.85
ERBB3-206ENST00000548709 C3orf79P0CE67 100 aa3.51□□□□□ -1.85
ERBB3-206ENST00000548709 H0YGX0 51 aa3.5□□□□□ -1.85
ERBB3-206ENST00000548709 H3BMG7 143 aa3.5□□□□□ -1.85
ERBB3-206ENST00000548709 KRTDAPP60985 99 aa3.5□□□□□ -1.85
ERBB3-206ENST00000548709 SPINK7P58062 85 aa3.49□□□□□ -1.85
ERBB3-206ENST00000548709 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
ERBB3-206ENST00000548709 Q8N9P0 234 aaPredicted RBP3.49□□□□□ -1.85
ERBB3-206ENST00000548709 TRBV7-4A0A0J9YYF1 115 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 C8orf87E5RJ46 101 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 HIST1H2BKO60814 126 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 HIST1H2BJP06899 126 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 HIST1H2BOP23527 126 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 HIST1H2BBP33778 126 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 HIST1H2BDP58876 126 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 HIST1H2BCP62807 126 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 HIST2H2BEQ16778 126 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.48□□□□□ -1.85
ERBB3-206ENST00000548709 HIST1H2BHQ93079 126 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 HIST1H2BNQ99877 126 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 HIST1H2BMQ99879 126 aa3.48□□□□□ -1.85
ERBB3-206ENST00000548709 A0A1B0GX51 115 aa3.47□□□□□ -1.85
ERBB3-206ENST00000548709 H3BQ85 93 aa3.47□□□□□ -1.85
ERBB3-206ENST00000548709 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.86
ERBB3-206ENST00000548709 FABP2P12104 132 aa3.46□□□□□ -1.86
ERBB3-206ENST00000548709 ZCCHC13Q8WW36 166 aaKnown RBP3.46□□□□□ -1.86
ERBB3-206ENST00000548709 RAB37Q96AX2 223 aa3.46□□□□□ -1.86
ERBB3-206ENST00000548709 FAM218AQ96MZ4 157 aa3.46□□□□□ -1.86
ERBB3-206ENST00000548709 A0A1W2PNM2 257 aa3.45□□□□□ -1.86
ERBB3-206ENST00000548709 HSBP1L1C9JCN9 74 aa3.45□□□□□ -1.86
ERBB3-206ENST00000548709 ANKRD29Q8N6D5 301 aa3.45□□□□□ -1.86
ERBB3-206ENST00000548709 COA6Q5JTJ3 125 aaKnown RBP3.44□□□□□ -1.86
ERBB3-206ENST00000548709 ATOH7Q8N100 152 aa3.44□□□□□ -1.86
ERBB3-206ENST00000548709 HIST1H4GQ99525 98 aa3.44□□□□□ -1.86
ERBB3-206ENST00000548709 LINC00472Q9H8W2 130 aa3.44□□□□□ -1.86
ERBB3-206ENST00000548709 A6NN06 94 aa3.43□□□□□ -1.86
ERBB3-206ENST00000548709 C21orf62-AS1Q17RA5 79 aa3.43□□□□□ -1.86
ERBB3-206ENST00000548709 A0A1B0GVX0 72 aa3.42□□□□□ -1.86
ERBB3-206ENST00000548709 TRACP01848 142 aa3.42□□□□□ -1.86
ERBB3-206ENST00000548709 LYRM7Q5U5X0 104 aa3.42□□□□□ -1.86
ERBB3-206ENST00000548709 WFDC13Q8IUB5 93 aa3.42□□□□□ -1.86
ERBB3-206ENST00000548709 DSCR8Q96T75 97 aa3.42□□□□□ -1.86
ERBB3-206ENST00000548709 J3KT08 172 aa3.41□□□□□ -1.86
ERBB3-206ENST00000548709 DEFB116Q30KQ4 102 aa3.41□□□□□ -1.86
ERBB3-206ENST00000548709 H1FX-AS1Q4G0G2 97 aa3.41□□□□□ -1.86
ERBB3-206ENST00000548709 TMEM256-PLSCR3K7ERE1 68 aa3.4□□□□□ -1.87
ERBB3-206ENST00000548709 NDUFB1O75438 58 aa3.4□□□□□ -1.87
ERBB3-206ENST00000548709 CCKP06307 115 aa3.4□□□□□ -1.87
ERBB3-206ENST00000548709 NEBP20929 6669 aa3.39□□□□□ -1.87
ERBB3-206ENST00000548709 DNAL4O96015 105 aa3.39□□□□□ -1.87
ERBB3-206ENST00000548709 A0A0B4J2C4 111 aa3.38□□□□□ -1.87
ERBB3-206ENST00000548709 ORMDL1Q9P0S3 153 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms