RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 ATP11AUNQ6ZP68 121 aa12.18□□□□□ -0.46
SMARCD1-204ENST00000547637 hADV29S1A0JD25 119 aa12.14□□□□□ -0.47
SMARCD1-204ENST00000547637 COA6Q5JTJ3 125 aaKnown RBP12.14□□□□□ -0.47
SMARCD1-204ENST00000547637 SNRPEP62304 92 aaKnown RBP12.13□□□□□ -0.47
SMARCD1-204ENST00000547637 Q6Q795 121 aa12.13□□□□□ -0.47
SMARCD1-204ENST00000547637 LINC00575Q6W349 94 aa12.13□□□□□ -0.47
SMARCD1-204ENST00000547637 ATOH7Q8N100 152 aa12.13□□□□□ -0.47
SMARCD1-204ENST00000547637 CLEC2BQ92478 149 aa12.13□□□□□ -0.47
SMARCD1-204ENST00000547637 TRBV7-7A0A0K0K1E9 115 aa12.12□□□□□ -0.47
SMARCD1-204ENST00000547637 Q6ZQY7 126 aa12.11□□□□□ -0.47
SMARCD1-204ENST00000547637 OCIAD2Q56VL3 154 aa12.09□□□□□ -0.47
SMARCD1-204ENST00000547637 Q75L30 129 aa12.08□□□□□ -0.48
SMARCD1-204ENST00000547637 OBSCN-AS1Q96MR7 158 aa12.08□□□□□ -0.48
SMARCD1-204ENST00000547637 IGFL1Q6UW32 110 aa12.07□□□□□ -0.48
SMARCD1-204ENST00000547637 SNHG12Q9BXW3 62 aa12.05□□□□□ -0.48
SMARCD1-204ENST00000547637 LST1O00453 97 aa12.04□□□□□ -0.48
SMARCD1-204ENST00000547637 SCGB1D1O95968 90 aa12.04□□□□□ -0.48
SMARCD1-204ENST00000547637 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.04□□□□□ -0.48
SMARCD1-204ENST00000547637 PPDPFLQ8WWR9 84 aa12.04□□□□□ -0.48
SMARCD1-204ENST00000547637 HSBP1L1C9JCN9 74 aa12.02□□□□□ -0.49
SMARCD1-204ENST00000547637 BVES-AS1Q5T3Y7 98 aa12.01□□□□□ -0.49
SMARCD1-204ENST00000547637 FLGP20930 4061 aaPredicted RBP12□□□□□ -0.49
SMARCD1-204ENST00000547637 Q96NJ1 140 aa11.99□□□□□ -0.49
SMARCD1-204ENST00000547637 SS18L2Q9UHA2 77 aa11.98□□□□□ -0.49
SMARCD1-204ENST00000547637 SNCGO76070 127 aa11.97□□□□□ -0.49
SMARCD1-204ENST00000547637 TRBV20-1A0A075B6N2 111 aa11.95□□□□□ -0.5
SMARCD1-204ENST00000547637 CFC1P0CG37 223 aa11.94□□□□□ -0.5
SMARCD1-204ENST00000547637 C12orf57Q99622 126 aa11.93□□□□□ -0.5
SMARCD1-204ENST00000547637 H3BUT2 72 aa11.9□□□□□ -0.5
SMARCD1-204ENST00000547637 S100A2P29034 98 aa11.9□□□□□ -0.5
SMARCD1-204ENST00000547637 HIST1H4GQ99525 98 aa11.88□□□□□ -0.51
SMARCD1-204ENST00000547637 TEN1Q86WV5 123 aa11.86□□□□□ -0.51
SMARCD1-204ENST00000547637 C20orf166-AS1Q96NR2 134 aa11.86□□□□□ -0.51
SMARCD1-204ENST00000547637 GHRHP01286 108 aa11.84□□□□□ -0.51
SMARCD1-204ENST00000547637 A8MUU9 505 aa11.82□□□□□ -0.52
SMARCD1-204ENST00000547637 H0YGX0 51 aa11.8□□□□□ -0.52
SMARCD1-204ENST00000547637 HIST1H2BLQ99880 126 aa11.8□□□□□ -0.52
SMARCD1-204ENST00000547637 NDUFV3P56181 108 aaKnown RBP11.79□□□□□ -0.52
SMARCD1-204ENST00000547637 HIST3H2BBQ8N257 126 aa11.79□□□□□ -0.52
SMARCD1-204ENST00000547637 RAB37Q96AX2 223 aa11.78□□□□□ -0.52
SMARCD1-204ENST00000547637 A0A087WSZ3 146 aa11.77□□□□□ -0.53
SMARCD1-204ENST00000547637 KRTAP9-8Q9BYQ0 159 aa11.74□□□□□ -0.53
SMARCD1-204ENST00000547637 FAM236DA0A1B0GTK5 79 aa11.73□□□□□ -0.53
SMARCD1-204ENST00000547637 H3BMG7 143 aa11.73□□□□□ -0.53
SMARCD1-204ENST00000547637 S100A6P06703 90 aa11.73□□□□□ -0.53
SMARCD1-204ENST00000547637 FAM236CP0DP71 79 aa11.73□□□□□ -0.53
SMARCD1-204ENST00000547637 COX8AP10176 69 aa11.72□□□□□ -0.53
SMARCD1-204ENST00000547637 DSCR10P59022 87 aa11.7□□□□□ -0.54
SMARCD1-204ENST00000547637 SIGMAR1Q99720 223 aa11.7□□□□□ -0.54
SMARCD1-204ENST00000547637 KRTAP9-7A8MTY7 169 aa11.69□□□□□ -0.54
SMARCD1-204ENST00000547637 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.69□□□□□ -0.54
SMARCD1-204ENST00000547637 FABP2P12104 132 aa11.69□□□□□ -0.54
SMARCD1-204ENST00000547637 LINC00313P59037 77 aa11.69□□□□□ -0.54
SMARCD1-204ENST00000547637 A0A1B0GX51 115 aa11.68□□□□□ -0.54
SMARCD1-204ENST00000547637 DLEU1O43261 78 aa11.68□□□□□ -0.54
SMARCD1-204ENST00000547637 RBM12B-AS1Q9P1G2 102 aa11.67□□□□□ -0.54
SMARCD1-204ENST00000547637 A0A0B4J2C4 111 aa11.66□□□□□ -0.54
SMARCD1-204ENST00000547637 FAM218AQ96MZ4 157 aa11.64□□□□□ -0.55
SMARCD1-204ENST00000547637 IGKV4-1P06312 121 aa11.61□□□□□ -0.55
SMARCD1-204ENST00000547637 HIGD1BQ9P298 99 aa11.61□□□□□ -0.55
SMARCD1-204ENST00000547637 ANKRD29Q8N6D5 301 aa11.59□□□□□ -0.55
SMARCD1-204ENST00000547637 A0A1W2PNM2 257 aa11.58□□□□□ -0.56
SMARCD1-204ENST00000547637 C14orf144Q96I85 54 aa11.58□□□□□ -0.56
SMARCD1-204ENST00000547637 TMEM238LA0A1B0GVL6 79 aa11.57□□□□□ -0.56
SMARCD1-204ENST00000547637 A6NJY4 79 aa11.57□□□□□ -0.56
SMARCD1-204ENST00000547637 H3BQ85 93 aa11.57□□□□□ -0.56
SMARCD1-204ENST00000547637 PRO1854Q9UHT4 67 aa11.57□□□□□ -0.56
SMARCD1-204ENST00000547637 TRBV7-4A0A0J9YYF1 115 aa11.56□□□□□ -0.56
SMARCD1-204ENST00000547637 DNAL4O96015 105 aa11.55□□□□□ -0.56
SMARCD1-204ENST00000547637 MT2AP02795 61 aa11.54□□□□□ -0.56
SMARCD1-204ENST00000547637 MTURNQ8N3F0 131 aa11.53□□□□□ -0.56
SMARCD1-204ENST00000547637 KRTAP16-1A8MUX0 517 aa11.52□□□□□ -0.57
SMARCD1-204ENST00000547637 S100A1P23297 94 aa11.51□□□□□ -0.57
SMARCD1-204ENST00000547637 CEND1Q8N111 149 aa11.51□□□□□ -0.57
SMARCD1-204ENST00000547637 ORMDL1Q9P0S3 153 aa11.51□□□□□ -0.57
SMARCD1-204ENST00000547637 KRTAP10-10P60014 251 aa11.5□□□□□ -0.57
SMARCD1-204ENST00000547637 USH2AO75445 5202 aa11.5□□□□□ -0.57
SMARCD1-204ENST00000547637 SPATA45Q537H7 98 aa11.49□□□□□ -0.57
SMARCD1-204ENST00000547637 PAM16Q9Y3D7 125 aa11.49□□□□□ -0.57
SMARCD1-204ENST00000547637 TMEM256-PLSCR3K7ERE1 68 aa11.48□□□□□ -0.57
SMARCD1-204ENST00000547637 HRES1P13985 223 aa11.48□□□□□ -0.57
SMARCD1-204ENST00000547637 SSPOA2VEC9 5147 aa11.47□□□□□ -0.57
SMARCD1-204ENST00000547637 IGHV6-1A0A0B4J1U7 121 aa11.47□□□□□ -0.57
SMARCD1-204ENST00000547637 TRACP01848 142 aa11.47□□□□□ -0.57
SMARCD1-204ENST00000547637 MPLKIPQ8TAP9 179 aa11.47□□□□□ -0.57
SMARCD1-204ENST00000547637 TRIAP1O43715 76 aa11.45□□□□□ -0.58
SMARCD1-204ENST00000547637 DEFB116Q30KQ4 102 aa11.45□□□□□ -0.58
SMARCD1-204ENST00000547637 VAMP8Q9BV40 100 aa11.45□□□□□ -0.58
SMARCD1-204ENST00000547637 A0A1B0GV72 72 aa11.44□□□□□ -0.58
SMARCD1-204ENST00000547637 MT1FP04733 61 aa11.44□□□□□ -0.58
SMARCD1-204ENST00000547637 CCKP06307 115 aa11.44□□□□□ -0.58
SMARCD1-204ENST00000547637 NOTCH2NLQ7Z3S9 236 aa11.44□□□□□ -0.58
SMARCD1-204ENST00000547637 LINC00472Q9H8W2 130 aa11.44□□□□□ -0.58
SMARCD1-204ENST00000547637 COX6CP09669 75 aa11.43□□□□□ -0.58
SMARCD1-204ENST00000547637 C2orf91Q6ZV80 131 aa11.43□□□□□ -0.58
SMARCD1-204ENST00000547637 PSMB2P49721 201 aa11.42□□□□□ -0.58
SMARCD1-204ENST00000547637 LINC00846Q9NV44 126 aa11.42□□□□□ -0.58
SMARCD1-204ENST00000547637 C8orf87E5RJ46 101 aa11.41□□□□□ -0.58
SMARCD1-204ENST00000547637 LCE2BO14633 110 aa11.4□□□□□ -0.58
SMARCD1-204ENST00000547637 KRTAP19-1Q8IUB9 90 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 221.1 ms