RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 COX6B2Q6YFQ2 88 aa9.87□□□□□ -0.83
GCN1-203ENST00000547369 VAMP3Q15836 100 aa9.86□□□□□ -0.83
GCN1-203ENST00000547369 LINC00575Q6W349 94 aa9.85□□□□□ -0.83
GCN1-203ENST00000547369 SNRPEP62304 92 aaKnown RBP9.83□□□□□ -0.84
GCN1-203ENST00000547369 Q6JHZ5 121 aa9.82□□□□□ -0.84
GCN1-203ENST00000547369 Q6ZQY7 126 aa9.82□□□□□ -0.84
GCN1-203ENST00000547369 hADV29S1A0JD25 119 aa9.81□□□□□ -0.84
GCN1-203ENST00000547369 TRBV7-7A0A0K0K1E9 115 aa9.8□□□□□ -0.84
GCN1-203ENST00000547369 CLEC2BQ92478 149 aa9.8□□□□□ -0.84
GCN1-203ENST00000547369 IGFL1Q6UW32 110 aa9.79□□□□□ -0.84
GCN1-203ENST00000547369 FLGP20930 4061 aaPredicted RBP9.78□□□□□ -0.84
GCN1-203ENST00000547369 OCIAD2Q56VL3 154 aa9.77□□□□□ -0.85
GCN1-203ENST00000547369 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.74□□□□□ -0.85
GCN1-203ENST00000547369 OBSCN-AS1Q96MR7 158 aa9.74□□□□□ -0.85
GCN1-203ENST00000547369 HSBP1L1C9JCN9 74 aa9.73□□□□□ -0.85
GCN1-203ENST00000547369 ATP11AUNQ6ZP68 121 aa9.73□□□□□ -0.85
GCN1-203ENST00000547369 Q75L30 129 aa9.73□□□□□ -0.85
GCN1-203ENST00000547369 PPDPFLQ8WWR9 84 aa9.71□□□□□ -0.86
GCN1-203ENST00000547369 HIST1H2BLQ99880 126 aa9.7□□□□□ -0.86
GCN1-203ENST00000547369 BVES-AS1Q5T3Y7 98 aa9.69□□□□□ -0.86
GCN1-203ENST00000547369 Q6Q795 121 aa9.69□□□□□ -0.86
GCN1-203ENST00000547369 HIST3H2BBQ8N257 126 aa9.69□□□□□ -0.86
GCN1-203ENST00000547369 C12orf57Q99622 126 aa9.69□□□□□ -0.86
GCN1-203ENST00000547369 SNHG12Q9BXW3 62 aa9.69□□□□□ -0.86
GCN1-203ENST00000547369 LST1O00453 97 aa9.68□□□□□ -0.86
GCN1-203ENST00000547369 S100A2P29034 98 aa9.68□□□□□ -0.86
GCN1-203ENST00000547369 H3BUT2 72 aa9.67□□□□□ -0.86
GCN1-203ENST00000547369 SCGB1D1O95968 90 aa9.66□□□□□ -0.86
GCN1-203ENST00000547369 Q96NJ1 140 aa9.64□□□□□ -0.87
GCN1-203ENST00000547369 HIST1H4GQ99525 98 aa9.64□□□□□ -0.87
GCN1-203ENST00000547369 SS18L2Q9UHA2 77 aa9.62□□□□□ -0.87
GCN1-203ENST00000547369 C20orf166-AS1Q96NR2 134 aa9.58□□□□□ -0.88
GCN1-203ENST00000547369 COX8AP10176 69 aa9.57□□□□□ -0.88
GCN1-203ENST00000547369 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
GCN1-203ENST00000547369 A8MUU9 505 aa9.56□□□□□ -0.88
GCN1-203ENST00000547369 SNCGO76070 127 aa9.56□□□□□ -0.88
GCN1-203ENST00000547369 CFC1P0CG37 223 aa9.56□□□□□ -0.88
GCN1-203ENST00000547369 S100A6P06703 90 aa9.55□□□□□ -0.88
GCN1-203ENST00000547369 NDUFV3P56181 108 aaKnown RBP9.55□□□□□ -0.88
GCN1-203ENST00000547369 H0YGX0 51 aa9.54□□□□□ -0.88
GCN1-203ENST00000547369 RAB37Q96AX2 223 aa9.54□□□□□ -0.88
GCN1-203ENST00000547369 A0A087WSZ3 146 aa9.53□□□□□ -0.88
GCN1-203ENST00000547369 DLEU1O43261 78 aa9.53□□□□□ -0.88
GCN1-203ENST00000547369 FAM218AQ96MZ4 157 aa9.53□□□□□ -0.88
GCN1-203ENST00000547369 TRBV20-1A0A075B6N2 111 aa9.51□□□□□ -0.89
GCN1-203ENST00000547369 A0A0B4J2C4 111 aa9.5□□□□□ -0.89
GCN1-203ENST00000547369 H3BMG7 143 aa9.49□□□□□ -0.89
GCN1-203ENST00000547369 KRTAP9-8Q9BYQ0 159 aa9.49□□□□□ -0.89
GCN1-203ENST00000547369 DSCR10P59022 87 aa9.48□□□□□ -0.89
GCN1-203ENST00000547369 C14orf144Q96I85 54 aa9.48□□□□□ -0.89
GCN1-203ENST00000547369 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
GCN1-203ENST00000547369 TMA7Q9Y2S6 64 aaKnown RBP9.47□□□□□ -0.89
GCN1-203ENST00000547369 GHRHP01286 108 aa9.46□□□□□ -0.9
GCN1-203ENST00000547369 A0A1B0GX51 115 aa9.45□□□□□ -0.9
GCN1-203ENST00000547369 FABP2P12104 132 aa9.45□□□□□ -0.9
GCN1-203ENST00000547369 SIGMAR1Q99720 223 aa9.44□□□□□ -0.9
GCN1-203ENST00000547369 A0A1W2PNM2 257 aa9.43□□□□□ -0.9
GCN1-203ENST00000547369 SPATA45Q537H7 98 aa9.41□□□□□ -0.9
GCN1-203ENST00000547369 C2orf91Q6ZV80 131 aa9.41□□□□□ -0.9
GCN1-203ENST00000547369 PAM16Q9Y3D7 125 aa9.41□□□□□ -0.9
GCN1-203ENST00000547369 LINC00313P59037 77 aa9.4□□□□□ -0.9
GCN1-203ENST00000547369 PRO1854Q9UHT4 67 aa9.4□□□□□ -0.9
GCN1-203ENST00000547369 KRTAP16-1A8MUX0 517 aa9.39□□□□□ -0.91
GCN1-203ENST00000547369 CEND1Q8N111 149 aa9.39□□□□□ -0.91
GCN1-203ENST00000547369 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
GCN1-203ENST00000547369 A6NJY4 79 aa9.37□□□□□ -0.91
GCN1-203ENST00000547369 IGKV4-1P06312 121 aa9.37□□□□□ -0.91
GCN1-203ENST00000547369 FAM236DA0A1B0GTK5 79 aa9.36□□□□□ -0.91
GCN1-203ENST00000547369 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.36□□□□□ -0.91
GCN1-203ENST00000547369 FAM236CP0DP71 79 aa9.36□□□□□ -0.91
GCN1-203ENST00000547369 ANKRD29Q8N6D5 301 aa9.36□□□□□ -0.91
GCN1-203ENST00000547369 TRBV7-4A0A0J9YYF1 115 aa9.35□□□□□ -0.91
GCN1-203ENST00000547369 TRIAP1O43715 76 aa9.35□□□□□ -0.91
GCN1-203ENST00000547369 VAMP8Q9BV40 100 aa9.35□□□□□ -0.91
GCN1-203ENST00000547369 USH2AO75445 5202 aa9.33□□□□□ -0.92
GCN1-203ENST00000547369 MT2AP02795 61 aa9.33□□□□□ -0.92
GCN1-203ENST00000547369 FXYD2P54710 66 aa9.33□□□□□ -0.92
GCN1-203ENST00000547369 NOTCH2NLQ7Z3S9 236 aa9.32□□□□□ -0.92
GCN1-203ENST00000547369 ORMDL1Q9P0S3 153 aa9.32□□□□□ -0.92
GCN1-203ENST00000547369 A0A1B0GV72 72 aa9.31□□□□□ -0.92
GCN1-203ENST00000547369 KRTAP9-7A8MTY7 169 aa9.31□□□□□ -0.92
GCN1-203ENST00000547369 DNAL4O96015 105 aa9.31□□□□□ -0.92
GCN1-203ENST00000547369 RBM12B-AS1Q9P1G2 102 aa9.31□□□□□ -0.92
GCN1-203ENST00000547369 H3BQ85 93 aa9.3□□□□□ -0.92
GCN1-203ENST00000547369 HRES1P13985 223 aa9.3□□□□□ -0.92
GCN1-203ENST00000547369 DEFB116Q30KQ4 102 aa9.3□□□□□ -0.92
GCN1-203ENST00000547369 MPLKIPQ8TAP9 179 aa9.3□□□□□ -0.92
GCN1-203ENST00000547369 SSPOA2VEC9 5147 aa9.29□□□□□ -0.92
GCN1-203ENST00000547369 LINC00472Q9H8W2 130 aa9.29□□□□□ -0.92
GCN1-203ENST00000547369 LOC105371267A0A1B0GV96 52 aa9.27□□□□□ -0.93
GCN1-203ENST00000547369 IGHV6-1A0A0B4J1U7 121 aa9.26□□□□□ -0.93
GCN1-203ENST00000547369 TMEM256-PLSCR3K7ERE1 68 aa9.26□□□□□ -0.93
GCN1-203ENST00000547369 TRACP01848 142 aa9.26□□□□□ -0.93
GCN1-203ENST00000547369 CCKP06307 115 aa9.26□□□□□ -0.93
GCN1-203ENST00000547369 MT1FP04733 61 aa9.25□□□□□ -0.93
GCN1-203ENST00000547369 PSMB2P49721 201 aa9.25□□□□□ -0.93
GCN1-203ENST00000547369 LCE2BO14633 110 aa9.22□□□□□ -0.93
GCN1-203ENST00000547369 K7ERJ3 54 aa9.21□□□□□ -0.94
GCN1-203ENST00000547369 COX6CP09669 75 aa9.21□□□□□ -0.94
GCN1-203ENST00000547369 KRTAP10-10P60014 251 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms