RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 FLG2Q5D862 2391 aaPredicted RBP10.84□□□□□ -0.67
RBFOX1-207ENST00000547338 KRTAP7-1Q8IUC3 87 aa10.84□□□□□ -0.67
RBFOX1-207ENST00000547338 LINC00474Q9P2X8 69 aa10.84□□□□□ -0.67
RBFOX1-207ENST00000547338 MYCBP2O75592 4640 aa10.84□□□□□ -0.67
RBFOX1-207ENST00000547338 FAM168BA1KXE4 195 aa10.84□□□□□ -0.67
RBFOX1-207ENST00000547338 REG3GQ6UW15 175 aa10.84□□□□□ -0.67
RBFOX1-207ENST00000547338 C9orf163Q8N9P6 203 aa10.84□□□□□ -0.67
RBFOX1-207ENST00000547338 IGLV5-48A0A075B6I7 105 aa10.83□□□□□ -0.68
RBFOX1-207ENST00000547338 IGKV3D-7A0A0C4DH55 119 aa10.83□□□□□ -0.68
RBFOX1-207ENST00000547338 RPL37AP8A6NKH3 93 aa10.82□□□□□ -0.68
RBFOX1-207ENST00000547338 PANO1I0J062 215 aa10.82□□□□□ -0.68
RBFOX1-207ENST00000547338 CXCL6P80162 114 aa10.82□□□□□ -0.68
RBFOX1-207ENST00000547338 FAM19A5Q7Z5A7 132 aaPredicted RBP10.82□□□□□ -0.68
RBFOX1-207ENST00000547338 Q8N377 158 aa10.81□□□□□ -0.68
RBFOX1-207ENST00000547338 CIRBP-AS1Q8TBR5 109 aa10.81□□□□□ -0.68
RBFOX1-207ENST00000547338 BCE1O60756 84 aa10.8□□□□□ -0.68
RBFOX1-207ENST00000547338 A0A096LNI7 61 aa10.79□□□□□ -0.68
RBFOX1-207ENST00000547338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.79□□□□□ -0.68
RBFOX1-207ENST00000547338 LINC01547P58512 204 aaPredicted RBP10.79□□□□□ -0.68
RBFOX1-207ENST00000547338 KRTAP10-4P60372 401 aaPredicted RBP10.79□□□□□ -0.68
RBFOX1-207ENST00000547338 Q9BRP9 147 aa10.79□□□□□ -0.68
RBFOX1-207ENST00000547338 FAM229AH3BQW9 127 aa10.78□□□□□ -0.68
RBFOX1-207ENST00000547338 Q6ZVQ6 151 aa10.78□□□□□ -0.68
RBFOX1-207ENST00000547338 UQCRQO14949 82 aa10.77□□□□□ -0.69
RBFOX1-207ENST00000547338 H0Y9J4 135 aa10.76□□□□□ -0.69
RBFOX1-207ENST00000547338 DMBT1Q9UGM3 2413 aaPredicted RBP10.76□□□□□ -0.69
RBFOX1-207ENST00000547338 UBE2BP63146 152 aa10.75□□□□□ -0.69
RBFOX1-207ENST00000547338 A0A1W2PNN7 141 aa10.74□□□□□ -0.69
RBFOX1-207ENST00000547338 C3orf22Q8N5N4 141 aa10.74□□□□□ -0.69
RBFOX1-207ENST00000547338 DEFB105AQ8NG35 78 aa10.74□□□□□ -0.69
RBFOX1-207ENST00000547338 HERC1Q15751 4861 aa10.73□□□□□ -0.69
RBFOX1-207ENST00000547338 CCDC179H3BU77 68 aa10.73□□□□□ -0.69
RBFOX1-207ENST00000547338 COX7CP15954 63 aa10.73□□□□□ -0.69
RBFOX1-207ENST00000547338 IGKV2-24A0A0C4DH68 120 aa10.72□□□□□ -0.69
RBFOX1-207ENST00000547338 CHTF8P0CG12 524 aa10.72□□□□□ -0.69
RBFOX1-207ENST00000547338 SMIM20Q8N5G0 67 aa10.7□□□□□ -0.7
RBFOX1-207ENST00000547338 PKHD1L1Q86WI1 4243 aa10.7□□□□□ -0.7
RBFOX1-207ENST00000547338 SERP2Q8N6R1 65 aa10.69□□□□□ -0.7
RBFOX1-207ENST00000547338 PLA2G1BP04054 148 aaKnown RBP10.68□□□□□ -0.7
RBFOX1-207ENST00000547338 NREPQ16612 68 aa10.68□□□□□ -0.7
RBFOX1-207ENST00000547338 SPACA4Q8TDM5 124 aa10.68□□□□□ -0.7
RBFOX1-207ENST00000547338 FAM19A1Q7Z5A9 133 aa10.68□□□□□ -0.7
RBFOX1-207ENST00000547338 F8WEM9 126 aa10.67□□□□□ -0.7
RBFOX1-207ENST00000547338 C1orf137Q5JT78 98 aa10.67□□□□□ -0.7
RBFOX1-207ENST00000547338 A0A087WVE0 104 aa10.66□□□□□ -0.7
RBFOX1-207ENST00000547338 SPRR4Q96PI1 79 aa10.66□□□□□ -0.7
RBFOX1-207ENST00000547338 LRP1Q07954 4544 aaKnown RBP10.66□□□□□ -0.7
RBFOX1-207ENST00000547338 IGLV8-61A0A075B6I0 122 aa10.65□□□□□ -0.7
RBFOX1-207ENST00000547338 ERC2-IT1O76042 136 aa10.65□□□□□ -0.7
RBFOX1-207ENST00000547338 ST20-AS1Q8NBB2 130 aa10.65□□□□□ -0.7
RBFOX1-207ENST00000547338 CRYGAP11844 174 aa10.64□□□□□ -0.71
RBFOX1-207ENST00000547338 Q8NBF4 154 aa10.64□□□□□ -0.71
RBFOX1-207ENST00000547338 SPRR1BP22528 89 aa10.63□□□□□ -0.71
RBFOX1-207ENST00000547338 C9orf153Q5TBE3 101 aa10.63□□□□□ -0.71
RBFOX1-207ENST00000547338 SMIM29Q86T20 159 aa10.63□□□□□ -0.71
RBFOX1-207ENST00000547338 PLAC8Q9NZF1 115 aa10.63□□□□□ -0.71
RBFOX1-207ENST00000547338 PHF5AQ7RTV0 110 aaKnown RBP10.61□□□□□ -0.71
RBFOX1-207ENST00000547338 FAT3Q8TDW7 4589 aa10.61□□□□□ -0.71
RBFOX1-207ENST00000547338 A0A1W2PNM2 257 aa10.6□□□□□ -0.71
RBFOX1-207ENST00000547338 RPL37AP61513 92 aaKnown RBP10.6□□□□□ -0.71
RBFOX1-207ENST00000547338 BPY2O14599 106 aa10.58□□□□□ -0.72
RBFOX1-207ENST00000547338 TRAV7A0A075B6U4 112 aa10.57□□□□□ -0.72
RBFOX1-207ENST00000547338 PRLHP81277 87 aa10.57□□□□□ -0.72
RBFOX1-207ENST00000547338 HIGD2AQ9BW72 106 aa10.57□□□□□ -0.72
RBFOX1-207ENST00000547338 UBE2AP49459 152 aa10.56□□□□□ -0.72
RBFOX1-207ENST00000547338 DPH3Q96FX2 82 aa10.56□□□□□ -0.72
RBFOX1-207ENST00000547338 KRTAP29-1A8MX34 341 aaPredicted RBP10.55□□□□□ -0.72
RBFOX1-207ENST00000547338 KRTAP13-1Q8IUC0 172 aa10.52□□□□□ -0.73
RBFOX1-207ENST00000547338 IGFL1Q6UW32 110 aa10.5□□□□□ -0.73
RBFOX1-207ENST00000547338 IGKV4-1P06312 121 aa10.49□□□□□ -0.73
RBFOX1-207ENST00000547338 KRTAP11-1Q8IUC1 163 aa10.49□□□□□ -0.73
RBFOX1-207ENST00000547338 SS18L2Q9UHA2 77 aa10.48□□□□□ -0.73
RBFOX1-207ENST00000547338 J3QL48 77 aa10.47□□□□□ -0.73
RBFOX1-207ENST00000547338 ZNF706Q9Y5V0 76 aaPredicted RBP10.47□□□□□ -0.73
RBFOX1-207ENST00000547338 OXTP01178 125 aa10.46□□□□□ -0.74
RBFOX1-207ENST00000547338 TMEM258P61165 79 aa10.44□□□□□ -0.74
RBFOX1-207ENST00000547338 MT1HL1P0DM35 61 aa10.42□□□□□ -0.74
RBFOX1-207ENST00000547338 LINC00483Q53H64 154 aa10.41□□□□□ -0.74
RBFOX1-207ENST00000547338 KLKP1Q107X0 134 aa10.4□□□□□ -0.74
RBFOX1-207ENST00000547338 NDUFC1O43677 76 aa10.38□□□□□ -0.75
RBFOX1-207ENST00000547338 DSCR10P59022 87 aa10.38□□□□□ -0.75
RBFOX1-207ENST00000547338 TNXBP22105 4242 aa10.37□□□□□ -0.75
RBFOX1-207ENST00000547338 ZNF861PO60384 105 aa10.37□□□□□ -0.75
RBFOX1-207ENST00000547338 A0A087WSZ3 146 aa10.36□□□□□ -0.75
RBFOX1-207ENST00000547338 RPS28P62857 69 aaKnown RBP10.36□□□□□ -0.75
RBFOX1-207ENST00000547338 C20orf197Q8N268 126 aa10.36□□□□□ -0.75
RBFOX1-207ENST00000547338 Q8N9L7 120 aa10.36□□□□□ -0.75
RBFOX1-207ENST00000547338 HMCN2Q8NDA2 5059 aa10.36□□□□□ -0.75
RBFOX1-207ENST00000547338 OCR1Q9BZK8 76 aa10.35□□□□□ -0.75
RBFOX1-207ENST00000547338 PSORS1C2Q9UIG4 136 aa10.35□□□□□ -0.75
RBFOX1-207ENST00000547338 J3KT08 172 aa10.34□□□□□ -0.75
RBFOX1-207ENST00000547338 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
RBFOX1-207ENST00000547338 HCG22E2RYF7 251 aa10.29□□□□□ -0.76
RBFOX1-207ENST00000547338 LINC00472Q9H8W2 130 aa10.29□□□□□ -0.76
RBFOX1-207ENST00000547338 K7EQZ3 153 aa10.28□□□□□ -0.76
RBFOX1-207ENST00000547338 SVIPQ8NHG7 77 aa10.28□□□□□ -0.76
RBFOX1-207ENST00000547338 CYSTM1Q9H1C7 97 aa10.28□□□□□ -0.76
RBFOX1-207ENST00000547338 TMEM254Q8TBM7 123 aa10.27□□□□□ -0.77
RBFOX1-207ENST00000547338 A0A0G2JQZ4 141 aa10.26□□□□□ -0.77
RBFOX1-207ENST00000547338 IGLV7-43P04211 117 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms