RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 MRPL55Q7Z7F7 128 aaKnown RBP6.86□□□□□ -1.31
NPAS3-205ENST00000547068 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
NPAS3-205ENST00000547068 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
NPAS3-205ENST00000547068 LINC00588Q9Y4M8 146 aa6.86□□□□□ -1.31
NPAS3-205ENST00000547068 K7EIL1 84 aa6.85□□□□□ -1.31
NPAS3-205ENST00000547068 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
NPAS3-205ENST00000547068 NOTCH1P46531 2555 aa6.85□□□□□ -1.31
NPAS3-205ENST00000547068 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
NPAS3-205ENST00000547068 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
NPAS3-205ENST00000547068 IGLV1-50A0A075B6I6 118 aa6.84□□□□□ -1.31
NPAS3-205ENST00000547068 IGKV2D-24A0A075B6R9 120 aa6.83□□□□□ -1.32
NPAS3-205ENST00000547068 LINC00476Q8WZB0 136 aa6.83□□□□□ -1.32
NPAS3-205ENST00000547068 A0A0G2JQZ4 141 aa6.83□□□□□ -1.32
NPAS3-205ENST00000547068 A0A1W2PNN7 141 aa6.83□□□□□ -1.32
NPAS3-205ENST00000547068 SPRR1AP35321 89 aa6.83□□□□□ -1.32
NPAS3-205ENST00000547068 NBEAL1Q6ZS30 2694 aa6.82□□□□□ -1.32
NPAS3-205ENST00000547068 FAM168BA1KXE4 195 aa6.82□□□□□ -1.32
NPAS3-205ENST00000547068 H0Y9P7 68 aa6.82□□□□□ -1.32
NPAS3-205ENST00000547068 RBM12B-AS1Q9P1G2 102 aa6.81□□□□□ -1.32
NPAS3-205ENST00000547068 ATP11AUNQ6ZP68 121 aa6.81□□□□□ -1.32
NPAS3-205ENST00000547068 PLA2G2DQ9UNK4 145 aa6.81□□□□□ -1.32
NPAS3-205ENST00000547068 H3BPC8 53 aa6.8□□□□□ -1.32
NPAS3-205ENST00000547068 A6NED7 52 aa6.8□□□□□ -1.32
NPAS3-205ENST00000547068 RPL37AP61513 92 aaKnown RBP6.8□□□□□ -1.32
NPAS3-205ENST00000547068 IGFL1Q6UW32 110 aa6.8□□□□□ -1.32
NPAS3-205ENST00000547068 LCA10Q71F78 164 aa6.8□□□□□ -1.32
NPAS3-205ENST00000547068 A0A087WSZ3 146 aa6.79□□□□□ -1.32
NPAS3-205ENST00000547068 KRTAP29-1A8MX34 341 aaPredicted RBP6.79□□□□□ -1.32
NPAS3-205ENST00000547068 Q75L30 129 aa6.79□□□□□ -1.32
NPAS3-205ENST00000547068 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
NPAS3-205ENST00000547068 DNAH3Q8TD57 4116 aa6.78□□□□□ -1.32
NPAS3-205ENST00000547068 IGLV5-37A0A075B6J1 123 aa6.78□□□□□ -1.32
NPAS3-205ENST00000547068 CASC2Q6XLA1 102 aa6.78□□□□□ -1.32
NPAS3-205ENST00000547068 NDUFS5O43920 106 aa6.77□□□□□ -1.33
NPAS3-205ENST00000547068 LOC101927531A0A1B0GV80 90 aa6.76□□□□□ -1.33
NPAS3-205ENST00000547068 H3BNG1 76 aa6.76□□□□□ -1.33
NPAS3-205ENST00000547068 COA5Q86WW8 74 aa6.76□□□□□ -1.33
NPAS3-205ENST00000547068 KRTAP7-1Q8IUC3 87 aa6.76□□□□□ -1.33
NPAS3-205ENST00000547068 C9orf163Q8N9P6 203 aa6.76□□□□□ -1.33
NPAS3-205ENST00000547068 A6NN06 94 aa6.75□□□□□ -1.33
NPAS3-205ENST00000547068 PHF5AQ7RTV0 110 aaKnown RBP6.75□□□□□ -1.33
NPAS3-205ENST00000547068 LINC01556Q5JQF7 62 aa6.74□□□□□ -1.33
NPAS3-205ENST00000547068 REG3GQ6UW15 175 aa6.74□□□□□ -1.33
NPAS3-205ENST00000547068 CNBPP62633 177 aaKnown RBP6.73□□□□□ -1.33
NPAS3-205ENST00000547068 CDC42SE1Q9NRR8 79 aa6.73□□□□□ -1.33
NPAS3-205ENST00000547068 IGLV7-46A0A075B6I9 117 aa6.71□□□□□ -1.34
NPAS3-205ENST00000547068 IGLV8-61A0A075B6I0 122 aa6.71□□□□□ -1.34
NPAS3-205ENST00000547068 A8MWP4 228 aa6.7□□□□□ -1.34
NPAS3-205ENST00000547068 PRLHP81277 87 aa6.69□□□□□ -1.34
NPAS3-205ENST00000547068 C7orf65Q6ZTY9 151 aa6.69□□□□□ -1.34
NPAS3-205ENST00000547068 C11orf45Q8TAV5 145 aa6.69□□□□□ -1.34
NPAS3-205ENST00000547068 SPAG11AQ6PDA7 123 aa6.68□□□□□ -1.34
NPAS3-205ENST00000547068 MOBPQ13875 183 aa6.67□□□□□ -1.34
NPAS3-205ENST00000547068 PCOTHQ58A44 107 aa6.67□□□□□ -1.34
NPAS3-205ENST00000547068 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
NPAS3-205ENST00000547068 CASC10Q5T4H9 136 aa6.67□□□□□ -1.34
NPAS3-205ENST00000547068 LINC00472Q9H8W2 130 aa6.66□□□□□ -1.34
NPAS3-205ENST00000547068 H0Y9J4 135 aa6.66□□□□□ -1.34
NPAS3-205ENST00000547068 MEGF8Q7Z7M0 2845 aa6.65□□□□□ -1.34
NPAS3-205ENST00000547068 DNAH10OSP0CZ25 163 aa6.65□□□□□ -1.34
NPAS3-205ENST00000547068 PLAC8Q9NZF1 115 aa6.64□□□□□ -1.35
NPAS3-205ENST00000547068 MMP24-AS1A0A0U1RRL7 71 aa6.64□□□□□ -1.35
NPAS3-205ENST00000547068 TENM3Q9P273 2699 aa6.63□□□□□ -1.35
NPAS3-205ENST00000547068 DEFB131BA0A096LNP1 70 aa6.62□□□□□ -1.35
NPAS3-205ENST00000547068 SPINK7P58062 85 aa6.62□□□□□ -1.35
NPAS3-205ENST00000547068 PRKDCP78527 4128 aaKnown RBP6.61□□□□□ -1.35
NPAS3-205ENST00000547068 HUWE1Q7Z6Z7 4374 aaKnown RBP6.61□□□□□ -1.35
NPAS3-205ENST00000547068 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
NPAS3-205ENST00000547068 TP53AIP1Q9HCN2 124 aa6.59□□□□□ -1.35
NPAS3-205ENST00000547068 COL7A1Q02388 2944 aa6.59□□□□□ -1.36
NPAS3-205ENST00000547068 IGKV2-24A0A0C4DH68 120 aa6.58□□□□□ -1.36
NPAS3-205ENST00000547068 A0A096LNI7 61 aa6.58□□□□□ -1.36
NPAS3-205ENST00000547068 HRES1P13985 223 aa6.57□□□□□ -1.36
NPAS3-205ENST00000547068 FBN3Q75N90 2809 aa6.57□□□□□ -1.36
NPAS3-205ENST00000547068 SPRR1BP22528 89 aa6.56□□□□□ -1.36
NPAS3-205ENST00000547068 Q6ZR54 194 aa6.55□□□□□ -1.36
NPAS3-205ENST00000547068 TGP01266 2768 aa6.55□□□□□ -1.36
NPAS3-205ENST00000547068 STAB2Q8WWQ8 2551 aa6.55□□□□□ -1.36
NPAS3-205ENST00000547068 NUPR2A6NF83 97 aa6.55□□□□□ -1.36
NPAS3-205ENST00000547068 WWC2-AS2Q96NR7 200 aa6.55□□□□□ -1.36
NPAS3-205ENST00000547068 ASB16-AS1Q495Z4 193 aa6.53□□□□□ -1.36
NPAS3-205ENST00000547068 C8orf87E5RJ46 101 aa6.53□□□□□ -1.36
NPAS3-205ENST00000547068 LINC00313P59037 77 aa6.52□□□□□ -1.37
NPAS3-205ENST00000547068 C8orf17Q9NRJ1 99 aa6.52□□□□□ -1.37
NPAS3-205ENST00000547068 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
NPAS3-205ENST00000547068 Q96NJ1 140 aa6.5□□□□□ -1.37
NPAS3-205ENST00000547068 SRRM2Q9UQ35 2752 aaKnown RBP6.5□□□□□ -1.37
NPAS3-205ENST00000547068 TENM2Q9NT68 2774 aa6.5□□□□□ -1.37
NPAS3-205ENST00000547068 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
NPAS3-205ENST00000547068 PRAC1Q96KF2 57 aa6.49□□□□□ -1.37
NPAS3-205ENST00000547068 IGHV6-1A0A0B4J1U7 121 aa6.48□□□□□ -1.37
NPAS3-205ENST00000547068 C4orf48Q5BLP8 95 aa6.48□□□□□ -1.37
NPAS3-205ENST00000547068 APLNQ9ULZ1 77 aa6.48□□□□□ -1.37
NPAS3-205ENST00000547068 UBE2DNLQ8IWF7 75 aa6.46□□□□□ -1.37
NPAS3-205ENST00000547068 A0A1B0GVX0 72 aa6.46□□□□□ -1.38
NPAS3-205ENST00000547068 CHTF8P0CG12 524 aa6.46□□□□□ -1.38
NPAS3-205ENST00000547068 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
NPAS3-205ENST00000547068 IGLV9-49A0A0B4J1Y8 123 aa6.45□□□□□ -1.38
NPAS3-205ENST00000547068 CDK2AP2O75956 126 aa6.44□□□□□ -1.38
NPAS3-205ENST00000547068 ADM2Q7Z4H4 148 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms